BAC Information

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BAC

Clone NameB6Ng01-213I21
Chromosome6 (Build37)
Map Location 87,371,835 - 87,372,525
singlet/doubletsinglet
Overlap genenone
Upstream geneTia1, C87436, 2310040G24Rik, Pcbp1, Asprv1, Mxd1, 2610209M04Rik, Gmcl1, Anxa4, 2610306M01Rik, Aak1, LOC100043555, Nfu1, Gfpt1, D6Ertd527e, Antxr1, Gkn1, Gkn2, 1190003M12Rik
Downstream geneBmp10, Arhgap25, Prokr1, 2010301N04Rik, 1810020O05Rik, AB041550, LOC100043118, EG545864, Gp9, Rab43, Isy1, Cnbp, Copg, 8430410A17Rik, LOC665416, H1fx, EG434064, LOC100043131, Rab7, Rpn1, Gata2, Dnajb8, Eefsec
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213I21.bB6Ng01-213I21.g
ACCGA031043GA031044
length424696
definitionB6Ng01-213I21.b B6Ng01-213I21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcaggatgaaatctcatttttatctattacaaaagtaacatgtgcagtgt
aaaaattctgagttgatgaaactcttcaagtatttggtaatcataatttc
cagtgataaactctctctctctctctctctctctctctctctctctctct
ctctctctctgtgtgtgtgtgtgtgtgtgtatgtgtatgtgtgtgtgtgt
ctgtcaccacaccctgtctctctctcactacagcatgggcgcccccgatg
tccactcttgtctctcaaaagttgaagtgatggatgtattttagataggc
aggaggagtgatatataaaagcgagctccagagagagggggaggtctata
tgacatacactctgtctctttttttttttgattttgtttgtgtgggcggg
ggggggagggggggtgcttatttg
gaattccttaaataggccgccagagagtgaaaccatgcctgagtcactca
gtcatgtgtgtgtgggagggaggggtcgactttattcatgaagatttcag
cggttgctttgagtcttctagggtgctactccgaggtcattggcttagta
agatgaaacctcccagcgcagtgtgtgatagaaccaagtggtcaaatctg
tgataaaaatgattccataatttgctctcaatctattattccagacacaa
gagtgacccttctcggttgcatggttgccatagttctgagttgcatcagc
ttccactcgataaggctagaatgtccgtcttctcagatcacacagacagc
ttgggggcaggcgtgtgttccattcatgtttccttccttccttctttctt
tctttctttctttctttctttctttctttctttctttctttctttctttc
tttctctctctctctctctctctctctctctctctctctctctctctgtg
tgtgtgtgtttgtgtgtttatggtttttcgagacagggttttctctgtat
agctctggctgccctgtaaatcactttgtagatcaggctgggctcgaact
cagaaaacccacctgcttctgccctcctgagttgcttgggattaaaggta
tttccctggaacccataaaggaggctggtactcagagagtgctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_87371835_87372525
seq2: B6Ng01-213I21.g_69_764 (reverse)

seq1  CAGAGCACTCTCTGGGTACCAGCCTCCTTTCTGGGTTCCAGGGAAATGCC  50
      || ||||||||||| ||||||||||||||| |||||||||||||||| ||
seq2  CAAAGCACTCTCTGAGTACCAGCCTCCTTTATGGGTTCCAGGGAAATACC  50

seq1  TTTAATCCC-AGC-ACTCAGGA-GGCAGAAGCAGGT-GGATTTCTGAGTT  96
      ||||||||| ||| |||||||| ||||||||||||| || ||||||||||
seq2  TTTAATCCCAAGCAACTCAGGAGGGCAGAAGCAGGTGGGTTTTCTGAGTT  100

seq1  CGAGGCCAGCCTGATCTACAAAGTGATTTCCAGGACAGCCAGAGCTATAC  146
      |||| |||||||||||||||||||||||| |||| |||||||||||||||
seq2  CGAGCCCAGCCTGATCTACAAAGTGATTTACAGGGCAGCCAGAGCTATAC  150

seq1  AGAG-AAACCCTGTCTCGAAAAACCATAAAAAAAGAAAGAAAGAAAGAGA  195
      |||| ||||||||||||||||||||||||| | | ||| | | | | | |
seq2  AGAGAAAACCCTGTCTCGAAAAACCATAAACACACAAACACACACACACA  200

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAA  250

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  300

seq1  AAGAAGGAAGGAAGGAAACATGAATGGAACACACGCCTGCCCCCAAGCTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAAGGAAGGAAACATGAATGGAACACACGCCTGCCCCCAAGCTG  350

seq1  TCTGTGTGATCTGAGAAGACGGACATTCTAGCCTTATCGAGTGGAAGCTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGATCTGAGAAGACGGACATTCTAGCCTTATCGAGTGGAAGCTG  400

seq1  ATGCAACTCAGAACTATGGCAACCATGCAACCGAGAAGGGTCACTCTTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACTCAGAACTATGGCAACCATGCAACCGAGAAGGGTCACTCTTGT  450

seq1  GTCTGGAATAATAGATTGAGAGCAAATTATGGAATCATTTTTATCACAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAATAATAGATTGAGAGCAAATTATGGAATCATTTTTATCACAGA  500

seq1  TTTGACCACTTGGTTCTATCACACACTGCGCTGGGAGGTTTCATCTTACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCACTTGGTTCTATCACACACTGCGCTGGGAGGTTTCATCTTACT  550

seq1  AAGCCAATGACCTCGGAGTAGCACCCTAGAAGACTCAAAGCAACCGCTGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAATGACCTCGGAGTAGCACCCTAGAAGACTCAAAGCAACCGCTGA  600

seq1  AATCTTCATGAATAAAGTCGACCCCTCCCTCCCACACACACATGACTGAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCATGAATAAAGTCGACCCCTCCCTCCCACACACACATGACTGAG  650

seq1  TGACTCAGGCATGGTTTCACTCTCTGGCGGCCTATTTAAGGAATTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAGGCATGGTTTCACTCTCTGGCGGCCTATTTAAGGAATTC  696