BAC Information

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BAC

Clone NameB6Ng01-213O05
Chromosome6 (Build37)
Map Location 10,202,041 - 10,203,020
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213O05.bB6Ng01-213O05.g
ACCGA031286GA031287
length1,0071,195
definitionB6Ng01-213O05.b B6Ng01-213O05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatcaactgaactgctcagaactgatctgtacataactgcatt
ccaaactgaactaaacaactcaactgaaatgagttgaactcaattctctt
ttcctcattgctctttaagtagcctctcttttctgcctgatctgctgaga
gctggtcatatcctatttctggctcattctgtcatgtctttctctgattc
atcaatttgtctgttcttcagttagaagttactgtttggaattaaagatg
agtcaagggtatgcctgtattccagccagagtgattaaaggaatgtattt
tggccagagaaattaaaagtgtgtgacatgctcaggtggatcatatcctt
gaatatgatccttcccagagcagccgtgtagataaattaaaattcgtcta
tattttacactagcaaaaaaaagaaaaaaagaaaaaagaaaaaaagatag
aaaaaagaaaaaagaaaaaaggagagaaaagaaaagaaaagaaaaggaaa
ggaaaggaaagaaaagaaaagaaaattgaaagttctacttggaaaaatat
gagattagtgaagagtgaagttggtgttaggaattcagaggactgaaggg
agggaaaactgatgggctattttgtatgagggtaaaataaaaaaaaatcc
aaaaaaaacatttaattaattaaaaatcatatatctagccaatatctagg
agttaaatattagagagctagatagtcttttcttttttttttttagattt
aagttgctttttatttatttattttttcattttttattaggtatttagct
catttacatttccaatgctataccaaaagtcccccatacccacccacccc
cactcccctaccacccacttcccctttttggccctggcggtccccctgta
ctggggcatataaagtttgcgtgtcaatgggcctcttctttccagtgatg
ccgactaggccatctttaataccacatgctgctagagtcagagctccggg
tactggt

gaattctcacctgaggaataccgaatggctgagaagtacccgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaattcaaaacaaccctgcgat
tccacctcactccagtcagaatggctaggatcaaaaattaagttgacagc
agatgctggtgaggatgtggagaaagacgaacactcctccattgttcgtg
ggattgcaaacttataccaccactctggaaatcagtctggtgattcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccaaaagatgttccaactggtaagaaagatacatgctccacgat
gttcataacagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaagaatggatacagaaaaagttgtatatttatacaatg
gagtactactcagctatataaaagaacgaatttatgaaattcctaggcaa
atggatggacctggagggcatcattctgagtgaggtaacccaatcacaaa
agaactcacacaatatgtattcaatgataagtggatattagcccagaaac
ttagaatacccaagatacaagatacaatttgcgaaacacatgaaactcaa
gaagagcgaagaccaaagtttggacactgtgtcccttcttagaattggga
acaaaatacccatggaaggagttacagagacaaagtttggagctcagacg
aaaggatggaccatctagagactgccatatccggggatccatcccataat
cagcttccaaaagctgaccccattgcatacactagcaagatattgctgaa
aggacccagatatagctgtctcttgtgagactatgcaggagcctagcaaa
cacagaagtggatgctcacagtcagctattgaattgatcacagagccccc
aatggaggagctagagaaagtaccaaagatctgtgggggatctgcaaccc
taatagtggaatacatatgactaccagttacccctggagctcgtgcctct
agctgatatgtatcagaaagatgacctagtcagcatcagtggaaagaaga
gccattgcttgccaactttatatgcctcagtacagtaaccatggctagat
gggagtcgttgtgggaatgtgcgtggctgcatctactatgaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10202041_10203020
seq2: B6Ng01-213O05.b_80_1057

seq1  TGATCTGTACATAACTGCATTCCAAACTGAACTAAACAACTCAACTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGTACATAACTGCATTCCAAACTGAACTAAACAACTCAACTGAAA  50

seq1  TGAGTTGAACTCAATTCTCTTTTCCTCATTGCTCTTTAAGTAGCCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGAACTCAATTCTCTTTTCCTCATTGCTCTTTAAGTAGCCTCTCT  100

seq1  TTTCTGCCTGATCTGCTGAGAGCTGGTCATATCCTATTTCTGGCTCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCTGATCTGCTGAGAGCTGGTCATATCCTATTTCTGGCTCATTC  150

seq1  TGTCATGTCTTTCTCTGATTCATCAATTTGTCTGTTCTTCAGTTAGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGTCTTTCTCTGATTCATCAATTTGTCTGTTCTTCAGTTAGAAGT  200

seq1  TACTGTTTGGAATTAAAGATGAGTCAAGGGTATGCCTGTATTCCAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTGGAATTAAAGATGAGTCAAGGGTATGCCTGTATTCCAGCCAG  250

seq1  AGTGATTAAAGGAATGTATTTTGGCCAGAGAAATTAAAAGTGTGTGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTAAAGGAATGTATTTTGGCCAGAGAAATTAAAAGTGTGTGACAT  300

seq1  GCTCAGGTGGATCATATCCTTGAATATGATCCTTCCCAGAGCAGCCGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGTGGATCATATCCTTGAATATGATCCTTCCCAGAGCAGCCGTGT  350

seq1  AGATAAATTAAAATTCGTCTATATTTTACACTAGCAAAAAAAAGAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATTAAAATTCGTCTATATTTTACACTAGCAAAAAAAAGAAAAAA  400

seq1  AGAAAAAAGAAAAAAAGATAGAAAAAAGAAAAAAGAAAAAAGGAGAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAGAAAAAAAGATAGAAAAAAGAAAAAAGAAAAAAGGAGAGAAA  450

seq1  AGAAAAGAAAAGAAAAGGAAAGGAAAGGAAAGAAAAGAAAAGAAAATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAAGAAAAGGAAAGGAAAGGAAAGAAAAGAAAAGAAAATTGA  500

seq1  AAGTTCTACTTGGAAAAATATGAGATTAGTGAAGAGTGAAGTTGGTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTACTTGGAAAAATATGAGATTAGTGAAGAGTGAAGTTGGTGTTA  550

seq1  GGAATTCAGAGGACTGAAGGGAGGGAAAACTGATGGGCTATTTTGTATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCAGAGGACTGAAGGGAGGGAAAACTGATGGGCTATTTTGTATGA  600

seq1  GGGTAAAATAAAAAAAAATCCAAAAAAAACATTTAATTAATTAAAAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAATAAAAAAAAATCCAAAAAAAACATTTAATTAATTAAAAATCA  650

seq1  TATATCTAGCCAATATCTAGGAGTTAAATATTAGAGAGCTAGATAGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTAGCCAATATCTAGGAGTTAAATATTAGAGAGCTAGATAGTCTT  700

seq1  TTCTTTTTTTTTTTTAGATTTAAGTTGCTTTTTATTTATTTATTTTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTTTTAGATTTAAGTTGCTTTTTATTTATTTATTTTTTCA  750

seq1  TTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAG  800

seq1  TCCCCCATACCCACCCACCCCCACTCCCCTACCACCCACTCCCCCTTTTT  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCCCCATACCCACCCACCCCCACTCCCCTACCACCCACTTCCCCTTTTT  850

seq1  GGCCCTGGC-GTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCCAAT  899
      ||||||||| || |||||||||||||||||||||||||||||||| ||||
seq2  GGCCCTGGCGGTCCCCCTGTACTGGGGCATATAAAGTTTGCGTGT-CAAT  899

seq1  GGGCCTC-TCTTTCCAGTGATGGCCGACTAGGCCATCTTTTAATA-CACA  947
      ||||||| ||||||||||||| ||||||||||||||| ||||||| ||||
seq2  GGGCCTCTTCTTTCCAGTGAT-GCCGACTAGGCCATC-TTTAATACCACA  947

seq1  TGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGT  980
      ||| ||||||||| |||||||| ||||||||||
seq2  TGCTGCTAGAGTC-AGAGCTCC-GGGTACTGGT  978


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