BAC Information

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BAC

Clone NameB6Ng01-214E18
Chromosome6 (Build37)
Map Location 133,234,099 - 133,235,313
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC631126, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
Downstream gene5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214E18.bB6Ng01-214E18.g
ACCGA031582GA031583
length1,194961
definitionB6Ng01-214E18.b B6Ng01-214E18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaggtttgaaatggggccaggaatgtcatgtccatatactgcc
agttaatcaatattcccactattatttgacaaatgcagagggaaggttta
tttactacatttgactcataactgtcattgacatataaactgctggcatg
gttagcctcaaaatcagcttgcctaaacaattcaacccagtcatggataa
ctacaaactaaaggattctttgaatatctaattttcctattccaaaaaag
gataaagtaataaccgccctctttcttcaataataattaggtctttcttg
agaggatccctgctgctagctttttttgttgggattccagatttttcaat
aggaaagttgtccctgaaaccgttttacttcttttttcttctgttgattt
ttctgtgcattccaggcagtgtcagaggctcttaataacatcctagagct
gattctgatcttttatcactctacatactcaaatcaaaaggaaatgactc
tgagctctagcattgtcccataggatctgaatagaaagggccagaaaata
tgaacacattgataaaatattttcccctagttttcttccctgacctgttc
tcaaagttctttctttcaggccctgtgtgcaacctcctaactctctcttc
tatacatcctcattcttggcttttcaattgcatattccaacaatacagag
gtttttgtatttgtaatcgtggcacaatagtacccctacctttggcaaat
aagaatgttttggcctgtaatatatcaaagacgatgtctccaaagacaga
atagtaataaggaaaggaagactatattaacatcaggaaagttgctaatt
gggtttcaatgtaatatatgaactctctgcctgtgcaaagtgttttagtc
agagtttccaatctctagaataaatataagatacccattaaataccttac
atctatacactataatgctgaaaagaataaaaataatactgtacaacaaa
ttcatgatcactaggacatttttacgtttcatttttttatggacattata
tttataaaggaaggtgtctttcttattctctgctttaaagttgtctccat
attctcccatgaagtatttgtcccacttctagaggactgagcatcccaaa
cttgggcctcctctggactcagtggatctgtcaatcctatcttg
gaattcctgatctttctaaaacttttatcatgaatgggtgttggaatttg
ccaaatgctttctcagcatctaacaagatgagcatgtcgtttttttcttt
gagtttgtttatacagtggattatgttgatggatatctgaatattaaaat
atccctgcatccctgggatgaagccaagctgatcatgatggatgatcatt
ttaatgtgttcttggattcagttcggaagaattgtattgaatatttttta
aagatttatttatttatttatttatttattatatggaagtacattgtagc
tgtcttcagacactccagaagagggagtcagatcttgttacagatggttg
tgagccaccatgtggttgctgggatttgaactctggaccttcggaagagc
agtcgggtgctcttactcactgagccatctcaccagcccccgtattgaat
atttttacatcgatgttcataatggaaattggtctgaagttctctttctt
tgttaggtctttgtgtggtttagatatcagagtaattgtggcttcataga
atgaattgggtagagtaccttttgtttctattttgtggaataatttgagg
agaattggaattatgtcttctttgaaggtctgatagaactctgcaataaa
cccatctggtccagggcttttttttggttaagggactattaatgactgct
tcaatttctttagagaatatgggactgtttatattgttaatctcatctgg
attttaatttggtacctgttatatgtctacaaaattgtccattttgttca
agttttccagttttgttaagtatagccttttttagtagggtctgatgatg
atttggatttcctcagattctgtgttatgtctcccttttcatttctaata
acgttaattaggatacttgtccctgtgccctctcattatctggctaaggg
tttatctattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_133234099_133235313
seq2: B6Ng01-214E18.b_48_1241 (reverse)

seq1  CAAGATATGATTGACAGA-CCACATGAAGCTCAAGAAGGAAGACCAAAGT  49
      ||||||| |||||||||| |||| |||   || || |||| | ||||  |
seq2  CAAGATAGGATTGACAGATCCAC-TGA--GTCCAG-AGGAGGCCCAAGTT  46

seq1  GTGGATGCTTCAGTCCTTCTTAGAAGTGGGGAACAAAATAC-TCATGGGA  98
        |||||| ||||||||   ||||||||||  || |||||| ||||||||
seq2  TGGGATGC-TCAGTCCT--CTAGAAGTGGG--AC-AAATACTTCATGGGA  90

seq1  GGAAATATGGAGACAAACTTTAAAGCAGAGAATAAAGGAAAGGACAACCT  148
      |  ||||||||||| ||||||||||||||||||||  |||| ||||  | 
seq2  G--AATATGGAGAC-AACTTTAAAGCAGAGAATAA--GAAA-GACA--CC  132

seq1  TTCCTTTATAAATATAATGTCCAATAAAAAAATGAAACGTAAAATTGTCC  198
      |||||||||||||||||||||| ||||||||||||||||||||| |||||
seq2  TTCCTTTATAAATATAATGTCC-ATAAAAAAATGAAACGTAAAAATGTCC  181

seq1  TTAGTGATTCATTGAATTTGTTGTACAGTATTATTTTTATTCTTTTCAGC  248
       |||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  -TAGTGA-TCA-TGAATTTGTTGTACAGTATTATTTTTATTCTTTTCAGC  228

seq1  ATTATAGTGTATAGATGTAAGGTATTTAATGGGTATCTTATATTTTATTC  298
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTATAGTGTATAGATGTAAGGTATTTAATGGGTATCTTATA-TTTATTC  277

seq1  TAGAGATTGGAAACTCTGACTAAAACACTTTGCACAGGCAGAGAGTTCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATTGGAAACTCTGACTAAAACACTTTGCACAGGCAGAGAGTTCAT  327

seq1  ATATTACATTGAAACCCAATTAGCAACTTTCCTGATGTTAATATAGTCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACATTGAAACCCAATTAGCAACTTTCCTGATGTTAATATAGTCTT  377

seq1  CCTTTCCTTATTACTATTCTGTCTTTGGAGACATCGTCTTTGATATATTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTTATTACTATTCTGTCTTTGGAGACATCGTCTTTGATATATTA  427

seq1  CAGGCCAAAACATTCTTATTTGCCAAAGGTAGGGGTACTATTGTGCCACG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAAAACATTCTTATTTGCCAAAGGTAGGGGTACTATTGTGCCACG  477

seq1  ATTACAAATACAAAAACCTCTGTATTGTTGGAATATGCAATTGAAAAGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATACAAAAACCTCTGTATTGTTGGAATATGCAATTGAAAAGCC  527

seq1  AAGAATGAGGATGTATAGAAGAGAGAGTTAGGAGGTTGCACACAGGGCCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAGGATGTATAGAAGAGAGAGTTAGGAGGTTGCACACAGGGCCT  577

seq1  GAAAGAAAGAACTTTGAGAACAGGTCAGGGAAGAAAACTAGGGGAAAATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAACTTTGAGAACAGGTCAGGGAAGAAAACTAGGGGAAAATA  627

seq1  TTTTATCAATGTGTTCATATTTTCTGGCCCTTTCTATTCAGATCCTATGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCAATGTGTTCATATTTTCTGGCCCTTTCTATTCAGATCCTATGG  677

seq1  GACAATGCTAGAGCTCAGAGTCATTTCCTTTTGATTTGAGTATGTAGAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGCTAGAGCTCAGAGTCATTTCCTTTTGATTTGAGTATGTAGAGT  727

seq1  GATAAAAGATCAGAATCAGCTCTAGGATGTTATTAAGAGCCTCTGACACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAGATCAGAATCAGCTCTAGGATGTTATTAAGAGCCTCTGACACT  777

seq1  GCCTGGAATGCACAGAAAAATCAACAGAAGAAAAAAGAAGTAAAACGGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGAATGCACAGAAAAATCAACAGAAGAAAAAAGAAGTAAAACGGTT  827

seq1  TCAGGGACAACTTTCCTATTGAAAAATCTGGAATCCCAACAAAAAAAGCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGACAACTTTCCTATTGAAAAATCTGGAATCCCAACAAAAAAAGCT  877

seq1  AGCAGCAGGGATCCTCTCAAGAAAGACCTAATTATTATTGAAGAAAGAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGGGATCCTCTCAAGAAAGACCTAATTATTATTGAAGAAAGAGG  927

seq1  GCGGTTATTACTTTATCCTTTTTTGGAATAGGAAAATTAGATATTCAAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTTATTACTTTATCCTTTTTTGGAATAGGAAAATTAGATATTCAAAG  977

seq1  AATCCTTTAGTTTGTAGTTATCCATGACTGGGTTGAATTGTTTAGGCAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTAGTTTGTAGTTATCCATGACTGGGTTGAATTGTTTAGGCAAG  1027

seq1  CTGATTTTGAGGCTAACCATGCCAGCAGTTTATATGTCAATGACAGTTAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTGAGGCTAACCATGCCAGCAGTTTATATGTCAATGACAGTTAT  1077

seq1  GAGTCAAATGTAGTAAATAAACCTTCCCTCTGCATTTGTCAAATAATAGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAAATGTAGTAAATAAACCTTCCCTCTGCATTTGTCAAATAATAGT  1127

seq1  GGGAATATTGATTAACTGGCAGTATATGGACATGACATTCCTGGCCCCAT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATATTGATTAACTGGCAGTATATGGACATGACATTCCTGGCCCCAT  1177

seq1  TTCAAACCTTTGAATTC  1215
      |||||||||||||||||
seq2  TTCAAACCTTTGAATTC  1194