BAC Information

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BAC

Clone NameB6Ng01-214P19
Chromosome6 (Build37)
Map Location 128,697,397 - 128,698,491
singlet/doubletsinglet
Overlap genenone
Upstream genePrmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861
Downstream geneKlrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214P19.bB6Ng01-214P19.g
ACCGA032087GA032088
length1,1871,091
definitionB6Ng01-214P19.b B6Ng01-214P19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaagcccatggtctgctcaagaactttctaggatgctatctcct
gtcctatgctaagacttctaagacgtcttttgcctctaaatttttatcta
tataatatgttgctctgacaaagctatggaaatatttctatgcttatcat
taacaaaatgggcagtatgtagctgctgatctaaagctgtggtagatacc
ttttaaagtttgcattttcagattttaaaaccaaggatcattttctaact
ctaataggcagcaaaacataagcaggtctctaacaaaaacataacagtag
attccttatctaaattaggatttacacaattagttaattgacaagaatta
caatgaatattttagacttgccaagattggcgatcttaactcttaaaatt
atcgaacaataagcatataggtaaggtacacaaactttcatagctataag
gagctggcctgagtggccaaaaacagtctctgacgaaagcatcttgtaca
ttctctgtaccagtctttttgcctcacgagtcagcttttttagttgtttg
tattttaagttggcaccaggttggtactccttgctgcagcccatggtgga
gatacgaagtttctttatctgtttgtaagtggatgctctccgatttctcc
tcttttgtgtactcagcacagctttttggtcaccactgtcagggcactca
caggtcacaggtcagcctgtcacattggaagctagtatgctcttgtagca
ttctgtggaaaaaacagaaacattcccccttttccccatattaagtatct
gaacaggatcatggcaagtgccaataagtggatcctttttatctgcccta
gacactattctatccagtttttccaaaacaaatatgtgatccaaataatg
tgcacggggatataatttctctcccccttctttgtttttaaagaaggtat
agttttaaagttttacataccttctctttgagatataaatatctcagtaa
catgtgtaacattaatgtgacaaaacatctttttggaggttgaaataaaa
ttttgagcaataactttcttttcttagaattctgtaactagaatctaaat
aataacatgttgcctctaagtcttatggaacacgatactcgacattaact
ctctttgaaggccaattaagcctatatgaaaatcttc
gaattcttctgtagacccaggatagggggttggggtattgcagtattcat
gaaaaggtctgctagtgcagaacccctggtggtgggcttaacaatagact
agctttacacctggatcccttcatagtggcagtggcctggtcccctcctt
cttgtgatgtatacgttccttttgtattgcatcactgtaacttggtggat
tgtatctgccttatttcttattattctttgatataaaaagtttggtgctc
aacctgacaaaatacattcagattctacacaatctcgcatgttggtctgt
ctgtcacccaccgactccttgaccatctgcacccagagaactgtccacac
agacaaagggacccagagggtctgcggcagtcaacgagagccattctcat
taaaatcatcactgtgtcctttcttggggtctcagttggtctgtgatctt
ctaggcagtactgctggtttctgcttcttccaggcattttagcttgtctg
agagtgactctcagtggtccttactccatatgcattattgtggaggaagg
ggactactaaatctgctcagtatcatgactttttaaagttattttgagtt
aaatcctttttaaattattaattaattaattaattaatatcacaaatact
gccccatacccactcccctctctttcccttcctctccctcccatgactat
tttgttccccctttctaagtgggattcaagcatcctcacttggaccttcc
ttcttatttaacttctttgggtctgtggggtgcctcatgggtagtctgta
cttttgtggctaatatccacttatcattgaacacataccatgcataccct
tttagatctgggttcccttcacataggataatattttcttgttccatcca
ttgcctgcatcatcataatgttctgttttaacagctgaatattattcatt
gtgtaatgaacccacattttttgtatccattcttggttgagggacatcat
gttgctacatttctgatattaccaacaaagctgcatggaaccagtgaagt
catggtgccctgacgcccatgtgctgaagcatcttttgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128697397_128698491
seq2: B6Ng01-214P19.g_67_1157

seq1  GAATTCTTCTGTAGACCCAGGATAGGGGGTTTGGGGTATTGCAGTATTCA  50
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAATTCTTCTGTAGACCCAGGATAGGGGG-TTGGGGTATTGCAGTATTCA  49

seq1  TGAAAAGGTCTGCTAGTGCAGAACCCCTGGTGGTGGGCTTAACAATAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGGTCTGCTAGTGCAGAACCCCTGGTGGTGGGCTTAACAATAGAC  99

seq1  TAGCTTTACACCTGGATCCCTTCATAGTGGCAGTGGCCTGGTCCCCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTACACCTGGATCCCTTCATAGTGGCAGTGGCCTGGTCCCCTCCT  149

seq1  TCTTGTGATGTATACGTTCCTTTTGTATTGCATCACTGTAACTTGGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGATGTATACGTTCCTTTTGTATTGCATCACTGTAACTTGGTGGA  199

seq1  TTGTATCTGCCTTATTTCTTATTATTCTTTGATATAAAAAGTTTGGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCTGCCTTATTTCTTATTATTCTTTGATATAAAAAGTTTGGTGCT  249

seq1  CAACCTGACAAAATACATTCAGATTCTACACAATCTCGCATGTTGGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGACAAAATACATTCAGATTCTACACAATCTCGCATGTTGGTCTG  299

seq1  TCTGTCACCCACCGACTCCTTGACCATCTGCACCCAGAGAACTGTCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCACCCACCGACTCCTTGACCATCTGCACCCAGAGAACTGTCCACA  349

seq1  CAGACAAAGGGACCCAGAGGGTCTGCGGCAGTCAACGAGAGCCATTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAAGGGACCCAGAGGGTCTGCGGCAGTCAACGAGAGCCATTCTCA  399

seq1  TTAAAATCATCACTGTGTCCTTTCTTGGGGTCTCAGTTGGTCTGTGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATCATCACTGTGTCCTTTCTTGGGGTCTCAGTTGGTCTGTGATCT  449

seq1  TCTAGGCAGTACTGCTGGTTTCTGCTTCTTCCAGGCATTTTAGCTTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCAGTACTGCTGGTTTCTGCTTCTTCCAGGCATTTTAGCTTGTCT  499

seq1  GAGAGTGACTCTCAGTGGTCCTTACTCCATATGCATTATTGTGGAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGACTCTCAGTGGTCCTTACTCCATATGCATTATTGTGGAGGAAG  549

seq1  GGGACTACTAAATCTGCTCAGTATCATGACTTTTTAAAGTTATTTTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTACTAAATCTGCTCAGTATCATGACTTTTTAAAGTTATTTTGAGT  599

seq1  TAAATCCTTTTTAAATTATTAATTAATTAATTAATTAATATCACAAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTTTTTAAATTATTAATTAATTAATTAATTAATATCACAAATAC  649

seq1  TGCCCCATACCCACTCCCCTCTCTTTCCCTTCCTCTCCCTCCCATGACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCATACCCACTCCCCTCTCTTTCCCTTCCTCTCCCTCCCATGACTA  699

seq1  TTTTGTTCCCCC-TTCTAAGTGGGATTCAAGCATCCTCACTTGGACCTTC  749
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCCCCCTTTCTAAGTGGGATTCAAGCATCCTCACTTGGACCTTC  749

seq1  CTTCTTATTTAACTTCTTTGGGTCTGTGGGGTGCCTCATGGGTAGTCTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATTTAACTTCTTTGGGTCTGTGGGGTGCCTCATGGGTAGTCTGT  799

seq1  AC-TTTGTGGCTAATATCCACTTATCATTGAACACATACCATGCATACCC  848
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTGGCTAATATCCACTTATCATTGAACACATACCATGCATACCC  849

seq1  TTTTAGATCTGGGTT-CCTTCACATAGGATAATATTTTCTTGTTCCATCC  897
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTAGATCTGGGTTCCCTTCACATAGGATAATATTTTCTTGTTCCATCC  899

seq1  ATTTGCCTGCATCATTCATAATGTTCTTGTTTTTAACAGCTGAATATTAT  947
      | |||||||||||| ||||||||||||   ||||||||||||||||||||
seq2  A-TTGCCTGCATCA-TCATAATGTTCT--GTTTTAACAGCTGAATATTAT  945

seq1  TCCATTGTGTAAATGAA-CCACATTTTTTGTATCCATTCTTTGTTTGAGG  996
      | |||||||| |||||| ||||||||||||||||||||| ||| ||||||
seq2  T-CATTGTGT-AATGAACCCACATTTTTTGTATCCATTC-TTGGTTGAGG  992

seq1  GACATCTATGTTGCTTACAGTTTCTGATTATTACAAATAAAGCTGCTATG  1046
      |||||| ||||||| |||| ||||||| |||||| || |||||||| |||
seq2  GACATC-ATGTTGC-TACA-TTTCTGA-TATTACCAACAAAGCTGC-ATG  1037

seq1  AACATAGTGAAG-CAT-GTGCCCTGGCGCC---ATGGTGGAGCATCTTTT  1091
       |   ||||||| ||| |||||||| ||||    || || ||||||||||
seq2  GAACCAGTGAAGTCATGGTGCCCTGACGCCCATGTGCTGAAGCATCTTTT  1087

seq1  GGGT  1095
      ||||
seq2  GGGT  1091