BAC Information

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BAC

Clone NameB6Ng01-215J10
Chromosome6 (Build37)
Map Location 132,130,441 - 132,131,357
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
Downstream genePrb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215J10.bB6Ng01-215J10.g
ACCGA032507GA032508
length922925
definitionB6Ng01-215J10.b B6Ng01-215J10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggggttgcttatataaactatcacaccatgtgcaaattgtga
taccttgattctttccagtttgtatctccttgttttcttgtgattgtctt
tttgctctagctaaaattttgagtattgtatgaatagatatggggagaat
gggtatcctcatcttgtccctgattttagtgggagcccttccagcacctc
tccattaagttgataattagttgttgttttgctcgatattgctcttaata
tgtgtagttgtgggctttgaacttctgatggctccaatacttttaacatg
aagtggtgtagttttgtggaataattttttagcatctaatgagatgatca
tgtgattgtttttctttgaatctatttatatagttgattgccttaatggg
tttgcatatattgaaccacccttgcttaccttggatcttctagtactggt
tgaggcttgttttgtgactggttatatggtcaattttagagaagatacca
tgaggtgctgagaagaagttatgctctttttaatggagaaatgttctcta
catatccattaaatgcatttagtacataacctctactggtttcaatgtgt
ctctgtttagtttctgtttcaatggtttgtcaatttgtgagagtgggatg
ttgaagtctcccactagtattatgtggggttcaatgtgtgttttgaactt
tagtaaagtttcttttatgaatgtaggtgcccttgcatttgcggcataga
tgttcagaactgagaattttctcttggtgtatgtttcctttgatgaatat
gaagtgtctcttccacatctcgcttgatatattaggttgaaaagtctgtt
tattgtatatgagggatggcaactcccagcttgttttcatgggaccattt
gctttgaagatttttctccagc
gaattcttaagcatataaataatttcaagtccttgggtaattactgctaa
cttcataattgactttttgctagaccacaacttcttttacctgccttggc
ttgtacctacattaccacttctgccaaaggagactattttagattaccac
ccaaacatttgttatgaaggctagtaggaattatagtaaatatgttaagt
gagcattcatggagtattagtgggttttgaggaaggagtgtggactgctc
agagctaggagagctagagtgttttgtcacttttgagatgtatttggaag
atatagaaaatttgactatatagtagactgtgccacatagacgtgaaata
aaaatatcaagtatattttttggtatttgaatacatgtttgggaattggt
gaaaaaatctgtataaagtattacgagctctgatttttcccaaatattct
gttctcatatagaaagcctagccctattaccatggattatggccatgttt
agagactgagatttccttatttatttttaaaaagcaaaatgaatctcttc
agacacaatcaaatagataatggaattctcaggcattctcagataaaagg
acattgaaacacacaggtgactctagaaatgcattcactccctggaatct
aaagaaagggttttgctgattcaaatgtacttatggaatagtaaaacttt
cgcccttgcaccatcagagtctatgtgaaaaaaataacctttgactaaat
ttatcttctgatttctttttgtatatttgggaagctacaaaaaataagcc
agaaataaccttagaggagaatggaaaaattcattaatcattatgacata
taatttcaaaggtccataggtaatgaaaggggattaattatgggcttatg
caccattgggatttataagaacgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132130441_132131357
seq2: B6Ng01-215J10.g_67_991 (reverse)

seq1  TGCGTTCTTAT-AATCCCAATGGTGCTAAAGCCCATAACTAATCCCCTTT  49
      ||||||||||| ||||||||||||||  |||||||||| |||||||||||
seq2  TGCGTTCTTATAAATCCCAATGGTGCATAAGCCCATAATTAATCCCCTTT  50

seq1  CATTAACTATGGA-CTTTGAAATTAATATTGTCAT-ATGATTAATG-ATT  96
      ||||| ||||||| |||||||||| ||| |||||| |||||||||| |||
seq2  CATTACCTATGGACCTTTGAAATT-ATA-TGTCATAATGATTAATGAATT  98

seq1  TTTCCATTCTCCTCTAAGGTTATTTCTTGCTTATTTTTTGTAGCTT-CCA  145
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  TTTCCATTCTCCTCTAAGGTTATTTCTGGCTTATTTTTTGTAGCTTCCCA  148

seq1  AATATACAAAAAGAAATCAG-AGATTAATTTAGTCAAAGGTTATTTTTTT  194
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  AATATACAAAAAGAAATCAGAAGATAAATTTAGTCAAAGGTTATTTTTTT  198

seq1  CACATAGACTCTGATGGTGCAA-GGCGAA--GTTTACTATTCCATAAGTA  241
      |||||||||||||||||||||| ||||||   ||||||||||||||||||
seq2  CACATAGACTCTGATGGTGCAAGGGCGAAAGTTTTACTATTCCATAAGTA  248

seq1  CATTTGAATCAGC-AAACCCTTTCTTTAGATTCCAGGGAGTGAATGCATT  290
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATTTGAATCAGCAAAACCCTTTCTTTAGATTCCAGGGAGTGAATGCATT  298

seq1  TCTAGAGTCACCTGTGTGTTTCAATGTCCTTTTATCTGAGAATGCCTGAG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGTCACCTGTGTGTTTCAATGTCCTTTTATCTGAGAATGCCTGAG  348

seq1  AATTCCATTATCTATTTGATTGTGTCTGAAGAGATTCATTTTGCTTTTTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATTATCTATTTGATTGTGTCTGAAGAGATTCATTTTGCTTTTTA  398

seq1  AAAATAAATAAGGAAATCTCAGTCTCTAAACATGGCCATAATCCATGGTA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATAAGGAAATCTCAGTCTCTAAACATGGCCATAATCCATGGTA  448

seq1  ATAGGGCTAGGCTTTCTATATGAGAACAGAATATTTGGGAAAAATCAGAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGCTAGGCTTTCTATATGAGAACAGAATATTTGGGAAAAATCAGAG  498

seq1  CTCGTAATACTTTATACAGATTTTTTCACCAATTCCCAAACATGTATTCA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTAATACTTTATACAGATTTTTTCACCAATTCCCAAACATGTATTCA  548

seq1  AATACCAAAAAATATACTTGATATTTTTATTTCACGTCTATGTGGCACAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAAAAAATATACTTGATATTTTTATTTCACGTCTATGTGGCACAG  598

seq1  TCTACTATATAGTCAAATTTTCTATATCTTCCAAATACATCTCAAAAGTG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTATATAGTCAAATTTTCTATATCTTCCAAATACATCTCAAAAGTG  648

seq1  ACAAAACACTCTAGCTCTCCTAGCTCTGAGCAGTCCACACTCCTTCCTCA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACACTCTAGCTCTCCTAGCTCTGAGCAGTCCACACTCCTTCCTCA  698

seq1  AAACCCACTAATACTCCATGAATGCTCACTTAACATATTTACTATAATTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCACTAATACTCCATGAATGCTCACTTAACATATTTACTATAATTC  748

seq1  CTACTAGCCTTCATAACAAATGTTTGGGTGGTAATCTAAAATAGTCTCCT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGCCTTCATAACAAATGTTTGGGTGGTAATCTAAAATAGTCTCCT  798

seq1  TTGGCAGAAGTGGTAATGTAGGTACAAGCCAAGGCAGGTAAAAGAAGTTG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGAAGTGGTAATGTAGGTACAAGCCAAGGCAGGTAAAAGAAGTTG  848

seq1  TGGTCTAGCAAAAAGTCAATTATGAAGTTAGCAGTAATTACCCAAGGACT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTAGCAAAAAGTCAATTATGAAGTTAGCAGTAATTACCCAAGGACT  898

seq1  TGAAATTATTTATATGCTTAAGAATTC  917
      |||||||||||||||||||||||||||
seq2  TGAAATTATTTATATGCTTAAGAATTC  925