BAC Information

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BAC

Clone NameB6Ng01-215O07
Chromosome6 (Build37)
Map Location 47,836,918 - 47,837,393
singlet/doubletsinglet
Overlap geneZfp282
Upstream geneCntnap2, LOC622745, LOC100041064, LOC100041078, A930035D04Rik, Cul1, Ezh2, Rn4.5s, EG384379, Pdia4, LOC100041154, Zfp786, Zfp398
Downstream geneZfp212, A230106D06Rik, AI894139, LOC623601, Zfp777, Zfp746, LOC665990, Krba1, Zfp467, Sspo, EG666005, Atp6v0e2, Lrrc61, Rarres2, EG330305, Repin1, Zfp775, AI854703, Gimap8, LOC100040560, Gimap9, Gimap4, Gimap6, Gimap7, LOC100041450, Gimap1, Gimap5, Gimap3, Tmem176b, Tmem176a, EG666105
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215O07.bB6Ng01-215O07.g
ACCGA032729GA032730
length470713
definitionB6Ng01-215O07.b B6Ng01-215O07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctaattcattcatgggtagtctgcagctagtcttcaggctcctgtttatc
tcagaccatgtcttagatttctgtattctgtcaccatgatacttctaaaa
agtgattctgtttccaactgtatagaaattactctgatacaggtggtagt
tgtgcacacctttaatcccagcacttgggaggcagaggcaagtgaatgtc
tgagttcaagcgaggccagcctggtctacagagcaagttccaggacagcc
aaagctgcatagagaaaccctgtctctgaaaactaaaaagaagaggatga
ggagaattaagaggaggaggagaaggagaaagagttgactctccaaagaa
atggtagaataagatgaagaagctactatactgcagaagatggtgaacac
accttggatatacttagttttagctacttatttctgatttaaaggaatgg
ctaaaaaggctatggaactt
gaattctctagggaaaatggctgagataaacacagcccctgtgggagtca
ggatttggccctaagagagcatagaagtcactttaaagtacaaataacat
ctctcataagggtgagttttatggcctagaaataatgttcaaggttttag
ggaaaaggggtctgggataagtaaaacataaattctgatagatacgcaca
catagagcccagctcatcagacagcaaaggatcaacaggctgtaaactgt
attgattctcagcattccaggaggaagacaggttaaacatctctttccta
tgaaggtggctggtagcttaactttcccggcttcttctgtgcttgtctgt
gtggaccagcactctctgccctctgcaccacctgtaggatcctgaagagt
aagatagagctgagatcattgacctatgtcagagctggtcccagaggtga
gctccagttatctaagcccttgggagatagaggcaccagaatcagggatt
cagtcatcctcatctacatggttagatgaaggcaagcttgtgtttcatga
aaccctgtctcaaaacaaaagaatctcagaaaaagaaaggaaggaaggaa
gggggagagagagagagagagagagagagagagagagagagagagagaaa
gagagagaaaggaaggaaggagttatataggaattaaggattgttcgcat
gtttttttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_47836918_47837393
seq2: B6Ng01-215O07.b_42_517

seq1  GAATTCCTAATTCATTCATGGGTAGTCTGCAGCTAGTCTTCAGGCTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAATTCATTCATGGGTAGTCTGCAGCTAGTCTTCAGGCTCCTG  50

seq1  TTTATCTCAGACCATGTCTTAGATTTCTGTATTCTGTCACCATGATACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTCAGACCATGTCTTAGATTTCTGTATTCTGTCACCATGATACTT  100

seq1  CTAAAAAGTGATTCTGTTTCCAACTGTATAGAAATTACTCTGATACAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAGTGATTCTGTTTCCAACTGTATAGAAATTACTCTGATACAGGT  150

seq1  GGTAGTTGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAAGTG  200

seq1  AATGTCTGAGTTCAAGCGAGGCCAGCCTGGTCTACAGAGCAAGTTCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGAGTTCAAGCGAGGCCAGCCTGGTCTACAGAGCAAGTTCCAGG  250

seq1  ACAGCCAAAGCTGCATAGAGAAACCCTGTCTCTGAAAACTAAAAAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAAAGCTGCATAGAGAAACCCTGTCTCTGAAAACTAAAAAGAAGA  300

seq1  GGATGAGGAGAATTAAGAGGAGGAGGAGAAGGAGAAAGAGTTGACTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGGAGAATTAAGAGGAGGAGGAGAAGGAGAAAGAGTTGACTCTCC  350

seq1  AAAGAAATGGTAGAATAAGATGAAGAAGCTACTATACTGCAGAAGATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATGGTAGAATAAGATGAAGAAGCTACTATACTGCAGAAGATGGT  400

seq1  GAACACACCTTGGATATACTTAGTTTTAGCTACTTATAGCTGATTTAAAG  450
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  GAACACACCTTGGATATACTTAGTTTTAGCTACTTATTTCTGATTTAAAG  450

seq1  GAATGGCTAAAAAGGCTATGGAACTT  476
      ||||||||||||||||||||||||||
seq2  GAATGGCTAAAAAGGCTATGGAACTT  476