BAC Information

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BAC

Clone NameB6Ng01-216D03
Chromosome6 (Build37)
Map Location 19,650,055 - 19,651,182
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216D03.bB6Ng01-216D03.g
ACCGA032947GA032948
length8661,141
definitionB6Ng01-216D03.b B6Ng01-216D03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggtcagccagggccacacagagaaaccctgtcttgaaaaaac
aaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaac
aaaacaaacaaacaaaacacacacacacacacataaattggaaagtttca
gcaatcaaatgaatcacgaataggacagaacatctaacccgaagaccaag
ccttagcttcttttgcctctttgtgcttggatttgcatatctagtactat
ttttgttctttattttttatcagttgtagtatttcatgtgaagtacttgc
agtattcaagtaggacttggatataatattgttgaatgtgcctattagaa
tgtaattctttggctttctccacaaccttgccagcatttgctgtcacctg
tgttctcctgggcatatacccagacgattcttcagcatataacaaggaca
cctgctccactacgttcatagcagccttatttataatagccagaagctgg
aaataacccagatgtcccttagcagaggaattgatacagaaattgtggtg
tatttacacaatggagtactaatcagcgattaaaaacaatgacttcatgg
aattttcaggcaaatgggtagaactagaaaatatcatcttgagtgaggta
acccagtcacaaatgaacacacatggtatatactcactggtaagtggata
ttagggaaaacctggggatacccatgatacaaaacacaaatcataagaag
ctcaagaaggaataccaaagtgtgcatgcttcagtcctacttagaaagga
gaacaaagcactcactggaggtagaagaagaaaaggacctgggggtgggg
ggaaaaggagagggta

gaattctatttattaattaaactgactaaccaaaagaaaatgttgaataa
agttattatacctctctaggacctaataaattatctatgttatcattatt
aatggaaagaaataatgaagttttattcgaatgggtgaaatgaaagtgag
aaaaacagaaaaaaatagtgaaagtacagcaattctttgaaattaaacaa
caaaacaacaaaaaacaagtgcagcaaatcaatgctaggtgaaaaggtta
taatctataagattataatggaagaatagatcccacagttgacaccttaa
aaatgcttactgagcatggtatcagtctcagccttttcataaaagttgat
gtcttctgaatgcactacacaggcatattttcatgtgactttatttatgt
gtttacttagttttattatactaatttgtatatttgttagtggtagaggc
tgtatcctcttgacatattgtatatttggggatgagaggacccattgtgg
aagttaattctttccaccagatggttctcagtggtaatccttatgttgcc
ctcctaggcagaatatgcctataaatgttaagccatcttaatgatcttcc
tgtttcaaatgtgacatatcattttggatcatccttggtggtccatagat
aatcctaaacaaaattttacttgatgttggaatttgactctttcttaaca
ttctatttttttagttcataaaaatttacttgtaaaattttgtgtttacc
agagatgtaatcttttattattaattttcattgggctatgatattttgtt
aaaaagataaaaacggagagttgtctgggcttttaggctaccctcattct
ttcttattcttatcaataataaccataacgtataaggtggagagaaagta
atataactgatgataagaaaaaactttcctaacttagccaaactctgttt
catttattctcaatagaaggcaagggtggaacaaaaccacccatggaagg
agttacagaaaacaaagtatggagcttgagatgaaggatggaccatggta
gagactgccatatccagggattccacccccataatcagcttccaaatgct
gaccaccattgcatatacactagcagaattttacttgaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19650055_19651182
seq2: B6Ng01-216D03.g_68_1208

seq1  GAATTCTATTTATTAATTAAACTGACTAACCAAAAGAAAATGTTGAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTATTAATTAAACTGACTAACCAAAAGAAAATGTTGAATAA  50

seq1  AGTTATTATACCTCTCTAGGACCTAATAAATTATCTATGTTATCATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTATACCTCTCTAGGACCTAATAAATTATCTATGTTATCATTATT  100

seq1  AATGGAAAGAAATAATGAAGTTTTATTCGAATGGGTGAAATGAAAGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAGAAATAATGAAGTTTTATTCGAATGGGTGAAATGAAAGTGAG  150

seq1  AAAAACAGAAAAAAATAGTGAAAGTACAGCAATTCTTTGAAATTAAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGAAAAAAATAGTGAAAGTACAGCAATTCTTTGAAATTAAACAA  200

seq1  CAAAACAACAAAAAACAAGTGCAGCAAATCAATGCTAGGTGAAAAGGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAACAAAAAACAAGTGCAGCAAATCAATGCTAGGTGAAAAGGTTA  250

seq1  TAATCTATAAGATTATAATGGAAGAATAGATCCCACAGTTGACACCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTATAAGATTATAATGGAAGAATAGATCCCACAGTTGACACCTTAA  300

seq1  AAATGCTTACTGAGCATGGTATCAGTCTCAGCCTTTTCATAAAAGTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTACTGAGCATGGTATCAGTCTCAGCCTTTTCATAAAAGTTGAT  350

seq1  GTCTTCTGAATGCACTACACAGGCATATTTTCATGTGACTTTATTTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGAATGCACTACACAGGCATATTTTCATGTGACTTTATTTATGT  400

seq1  GTTTACTTAGTTTTATTATACTAATTTGTATATTTGTTAGTGGTAGAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTAGTTTTATTATACTAATTTGTATATTTGTTAGTGGTAGAGGC  450

seq1  TGTATCCTCTTGACATATTGTATATTTGGGGATGAGAGGACCCATTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCTCTTGACATATTGTATATTTGGGGATGAGAGGACCCATTGTGG  500

seq1  AAGTTAATTCTTTCCACCAGATGGTTCTCAGTGGTAATCCTTATGTTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAATTCTTTCCACCAGATGGTTCTCAGTGGTAATCCTTATGTTGCC  550

seq1  CTCCTAGGCAGAATATGCCTATAAATGTTAAGCCATCTTAATGATCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGGCAGAATATGCCTATAAATGTTAAGCCATCTTAATGATCTTCC  600

seq1  TGTTTCAAATGTGACATATCATTTTGGATCATCCTTGGTGGTCCATAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAATGTGACATATCATTTTGGATCATCCTTGGTGGTCCATAGAT  650

seq1  AATCCTAAACAAAATTTTACTTGATGTTGGAATTTGACTCTTTCTTAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTAAACAAAATTTTACTTGATGTTGGAATTTGACTCTTTCTTAACA  700

seq1  TTCTATTTTTTTAGTTCATAAAAATTTACTTGTAAAATTTTGTGTTTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTTTTAGTTCATAAAAATTTACTTGTAAAATTTTGTGTTTACC  750

seq1  AGAGATGTAATCTTTTATTATTAATTTTCATTGGGCTATGATATTTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTAATCTTTTATTATTAATTTTCATTGGGCTATGATATTTTGTT  800

seq1  AAAAAGATAAAAACGGAGAGTTGTCTGGGCTTTTAGGCTACCCTCATTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATAAAAACGGAGAGTTGTCTGGGCTTTTAGGCTACCCTCATTCT  850

seq1  TTCTTATTCTTATCAATAATAACCATAACGTATAAGGTGGAGAGAAAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTCTTATCAATAATAACCATAACGTATAAGGTGGAGAGAAAGTA  900

seq1  ATATAACTGATGATAAGAAAAAACTTT-CTAACTTAGGCCAAACTCTGTT  949
      ||||||||||||||||||||||||||| |||||||| |||||||||||||
seq2  ATATAACTGATGATAAGAAAAAACTTTCCTAACTTA-GCCAAACTCTGTT  949

seq1  TCATT--ATCTCAATAGAAG--CAGGGTGGAACAAAA-CACCCATGGAAG  994
      |||||   ||||||||||||   |||||||||||||| ||||||||||||
seq2  TCATTTATTCTCAATAGAAGGCAAGGGTGGAACAAAACCACCCATGGAAG  999

seq1  GAGTTACAG-AAACAAAGTATGGAGC-TGAGATGAAAGGATGGACCAT-G  1041
      ||||||||| |||||||||||||||| ||||||| ||||||||||||| |
seq2  GAGTTACAGAAAACAAAGTATGGAGCTTGAGATG-AAGGATGGACCATGG  1048

seq1  TAGAGACTGCCATATCCAGGGA-TCCA-CCCCATAATCAGCTTCCAAATG  1089
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  TAGAGACTGCCATATCCAGGGATTCCACCCCCATAATCAGCTTCCAAATG  1098

seq1  CTGA-CACCATTGC--ATACACTAGCAAGATTTTAC-TGAAAG  1128
      |||| |||||||||  |||||||||||  ||||||| ||||||
seq2  CTGACCACCATTGCATATACACTAGCAGAATTTTACTTGAAAG  1141


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