BAC Information

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BAC

Clone NameB6Ng01-216L05
Chromosome6 (Build37)
Map Location 130,057,909 - 130,059,037
singlet/doubletsinglet
Overlap geneLOC100038894
Upstream geneKlrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038895, Klra4, LOC667769
Downstream geneLOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216L05.bB6Ng01-216L05.g
ACCGA033321GA033322
length1,0861,219
definitionB6Ng01-216L05.b B6Ng01-216L05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgcaccccgtttttaatagggttatttggttt
tctggagtctaacttcttgagttctttgtatatattgggtattaaccctt
tattgtctttaggattggtaaagatcttttcccaatatgttgattgcctt
tttgtctactgacagtgtcctttgccctacagatgctttccaattttatg
agatcctatttgacaattcttagagcatacacctttgctgtcctgttcag
gaaatttccccctgtgaacctgtattggaggcttttctcaaaatctattc
tactatttttaacaccacttcatggtaaaagtcattgaaagattaggact
tcaaggcccataactaaacatagtaaaaacaatatacaccaaaccagtgg
ccaacatcaaactaaatggaaaaaaaaaaacatgaagcaatcccactaaa
atcaggaactagacaaggctgcccactctttccctatttatttaatatac
ttggattccaatccagagcaattagacaacaaaaggagattaaagggatt
caaatagcactgtaaactgttaagaagctcaatatacaattgttaactgt
gtagcacgtgcacagaactaataaatctttatatatgttgtcttagagtt
actaatttaaaaacaaattgtattcatacacctcttcaaggttcataatc
caatatagttagtaacatttccagatgccctcattgagtcttgggtgtct
cccttatcccaggtctctgtcttactctggacactaaaccaaacaaactt
aagaagaaatgtattatttcatttcgcatgttactactgaatgttaaagg
aatatggaataaaaatttaggtgaaggttcaaagctgaacttcagaggaa
ctatttttctgatttgaaacatagctcaggtttagctatttttcatttct
tcctttttaataattatttatatattcaccactctctctctctgcattcc
taggctcacatgtcctactctttttaccttgcattcctcagaaagggaac
ttcatgagttaagaacaaatactcaataggagggga
gaattccattgaaagaattaagctgagaataatagagatagaagaaattt
aagtgtctcagctccaaggcccacaaaatatattcaacaagtcagagaaa
ataaatccccacctaaagaaaacaatatgtataaaaatacacatgtctac
agaacaacacatagaatggaccagaaaatgtaattctcccacttagtaaa
caaaacagacatctacagaacaaagaaagaatatgaaaagaagaaagggg
taaagggcagaccatgcagaattaatgaacttctgaacaaagactctaaa
tgctagaagggcctggacagaaatgttgcaacctctaaaaatcctgactt
caacatagactatagtatccagcaaaactctcaatcacctcagatggaga
atataaagtatttcaagacaaatccaaattcaaaattatctacccacaaa
taaagcctaaaaaaatactagaagaaatactccaacccaaggataataac
tacattcaagaaaacacaggaagtaagtaactccatacatgcaaaaacaa
gggaaaagatgcacacacacacacacacacatacacacacacacacacac
acacacacacacacacacacacatacacacacacacacacacacacacac
acacacacacacacacacacacactaaagcccccaacagtaaaataacaa
gaaatatcaaccattggtcattaatatctctcaatatcaatgggctcatt
tctcaataaaacaaacaggctaacagaatggatgcaaaaatactacccag
aattctgttacaaacaagaaacacacttccacaataaaaatagacattac
ctcagagtaaatggctggaaaagaagactcccaaagcaaatggacccaaa
aagccagctgcagtagacattctaatatcttatagcatagactctcagtc
agataatccaaaagagacaggtactgaaacttgatactcatcaaaggaaa
tttctaacaagatgattatcttcaattctggataattattcacggatatc
caccccacattttaaaggaagcattctaaattaaatcctaatcaaactgt
acatataatagtgggagaacttcacacctgaactctcatggatgacgtca
tcgaacgaccttaggaggacaattatgaaaccttaacacggacgtgccta
cgtgaagatgagtacaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130057909_130059037
seq2: B6Ng01-216L05.b_41_1126

seq1  GAATTCTTTGTTTAGCTCTGCACCCCGTTTTTAATAGGGTTATTTGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGCACCCCGTTTTTAATAGGGTTATTTGGTTT  50

seq1  TCTGGAGTCTAACTTCTTGAGTTCTTTGTATATATTGGGTATTAACCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCTAACTTCTTGAGTTCTTTGTATATATTGGGTATTAACCCTT  100

seq1  TATTGTCTTTAGGATTGGTAAAGATCTTTTCCCAATATGTTGATTGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTTTAGGATTGGTAAAGATCTTTTCCCAATATGTTGATTGCCTT  150

seq1  TTTGTCTACTGACAGTGTCCTTTGCCCTACAGATGCTTTCCAATTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTACTGACAGTGTCCTTTGCCCTACAGATGCTTTCCAATTTTATG  200

seq1  AGATCCTATTTGACAATTCTTAGAGCATACACCTTTGCTGTCCTGTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTATTTGACAATTCTTAGAGCATACACCTTTGCTGTCCTGTTCAG  250

seq1  GAAATTTCCCCCTGTGAACCTGTATTGGAGGCTTTTCTCAAAATCTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCCCCCTGTGAACCTGTATTGGAGGCTTTTCTCAAAATCTATTC  300

seq1  TACTATTTTTAACACCACTTCATGGTAAAAGTCATTGAAAGATTAGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTTTAACACCACTTCATGGTAAAAGTCATTGAAAGATTAGGACT  350

seq1  TCAAGGCCCATAACTAAACATAGTAAAAACAATATACACCAAACCAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCCCATAACTAAACATAGTAAAAACAATATACACCAAACCAGTGG  400

seq1  CCAACATCAAACTAAATGGAAAAAAAAAAACATGAAGCAATCCCACTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATCAAACTAAATGGAAAAAAAAAAACATGAAGCAATCCCACTAAA  450

seq1  ATCAGGAACTAGACAAGGCTGCCCACTCTTTCCCTATTTATTTAATATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAACTAGACAAGGCTGCCCACTCTTTCCCTATTTATTTAATATAC  500

seq1  TTGGATTCCAATCCAGAGCAATTAGACAACAAAAGGAGATTAAAGGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTCCAATCCAGAGCAATTAGACAACAAAAGGAGATTAAAGGGATT  550

seq1  CAAATAGCACTGTAAACTGTTAAGAAGCTCAATATACAATTGTTAACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGCACTGTAAACTGTTAAGAAGCTCAATATACAATTGTTAACTGT  600

seq1  GTAGCACGTGCACAGAACTAATAAATCTTTATATATGTTGTCTTAGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACGTGCACAGAACTAATAAATCTTTATATATGTTGTCTTAGAGTT  650

seq1  ACTAATTTAAAAACAAATTGTATTCATACACCTCTTCAAGGTTCATAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTAAAAACAAATTGTATTCATACACCTCTTCAAGGTTCATAATC  700

seq1  CAATATAGTTAGTAACATTTCCAGATGCCCTCATTGAGTCTTGGGTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAGTTAGTAACATTTCCAGATGCCCTCATTGAGTCTTGGGTGTCT  750

seq1  CCCTTATCCCAGGTCTCTGTCTTACTCTGGACACTAAACCAAACAAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATCCCAGGTCTCTGTCTTACTCTGGACACTAAACCAAACAAACTT  800

seq1  AAGAAGAAATGTATTATTTCATTTCGCATGTTACTACTGAATGTTAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAATGTATTATTTCATTTCGCATGTTACTACTGAATGTTAAAGG  850

seq1  AATATGGAATAAAAATTTAGGTGAAGGTTCAAAGCTGAAACTTCAGAGGA  900
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATATGGAATAAAAATTTAGGTGAAGGTTCAAAGCTG-AACTTCAGAGGA  899

seq1  ACTATTTTTCTGATTTGAAACATAGCTCAGGTTTAGCTATTTTTCATTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTTCTGATTTGAAACATAGCTCAGGTTTAGCTATTTTTCATTTC  949

seq1  TTCCTTTTTTAAATAATTTATTTATATATTCACCACTCTCTCTTCTCCTG  1000
      |||||||||  ||||| ||||||||||||||||||||||||| ||| |||
seq2  TTCCTTTTT--AATAA-TTATTTATATATTCACCACTCTCTC-TCT-CTG  994

seq1  CCATTCCTAGGCTCACATGTCCCTACTCTTTTTAACCCTTTGCCATTTCC  1050
       ||||||||||||||||||| |||||||||||||   | ||||   ||||
seq2  -CATTCCTAGGCTCACATGT-CCTACTCTTTTTA---CCTTGC--ATTCC  1037

seq1  TCAGAAAAGGGGAAACCTTTCATGAG-TAAGAACAAAATACTC-ATAGGA  1098
      |||||||  |||||    |||||||| ||||||| |||||||| ||||||
seq2  TCAGAAA--GGGAA---CTTCATGAGTTAAGAAC-AAATACTCAATAGGA  1081

seq1  -GGGAGGGGATTGGGAGTGAGGGAGGAGGGGA  1129
       ||||                           
seq2  GGGGA---------------------------  1086