BAC Information

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BAC

Clone NameB6Ng01-217D14
Chromosome6 (Build37)
Map Location 100,676,525 - 100,743,283
singlet/doubletdoublet
Overlap geneBC049816
Upstream geneLOC384466, LOC626503, LOC100043703, Rybp, Shq1, LOC625221
Downstream genePpp4r2, EG545870, LOC100043321, Pdzrn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217D14.bB6Ng01-217D14.g
ACCGA033694GA033695
length1,193714
definitionB6Ng01-217D14.b B6Ng01-217D14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,742,091 - 100,743,283)(100,676,525 - 100,677,236)
sequence
gaattctgtcaggacactggaatctcttaagaagagaagtcgccatagct
attagtaggactctggagtctgaagcaatgactaccgtccttggcagcat
cccaaagacagccccctgaaagcttggctggtctgagtggaaagtgtgca
tgtgcgtgtgtgtgtgtgatatgtattggtgttttgcctgcatgtgtgtc
tgtgtgagaatgtgggattccctggcactggagctaaagacagtcgtgag
ctgtcacatgggtgctgggaattgaacccgagttctctggaagatcatcc
agcgctcttaaccactgagctacctctccagccccttgagtggagttttg
atccctgggactgaagctcattcatcctgacagagttcccttgggttttg
gtcaggttttctctttctattaaactctggccaggacttaagcccagctg
tcaaggtatgagctcaggggctgaagagacggctcagctggtaaagtgct
tgtcttgcaagcatgatgacctaagtttggtccccagcacccatgtgaaa
gccgggtgcagcagcagacacctataatcctaggtctggggaaacagaga
caggaggagtagccttcaggtttgttggccagccagtctggccaaaatgg
caagttacaggttcaatgaaagaccctgcctcaaaaaagaaaattatgtg
gagtgtgattgaggaagacacccaaagtcaacctctggtctccattttcc
acaagcaggcaccacacatacatgtatgcatagacatgaatagcagacac
cccccccaacacacacaatgtgagctcagcctttcattctgagagaaacc
accttggctcacatttcaggaaatgtcctgtgggaccagctgcctgcaca
ggccccgtgggcttcattagcctcctcttgaaggcagcctgtaacctagc
caggcactcacacacccacaagcttactacctaatgatggcaggaagttt
tcaacaggttttagctaatgacctttaaatctatctaactagccagtact
ggctacaaggaaactctcatcaagtgcgggctttcattcatagcacccaa
tgagcctccagcaataacatgtttattcttctagtgctgccatatccttc
acccttcattcttgcaatgctaggatgaacattctgaaaaaaa
gaattccgccccaagatcaaatccacaaaccctggcatctccattggcga
tgtggcaaaaaagctgggtgagatgtgagacaacttcagtgacaatgaaa
agcagcctacgtcaccaaggcagcaaagctgaaggagaaggatgagaagg
gtgtcgctgactgtcagtctaaaggcaagtttgagggggccaaggggcct
gctaaagttgcccggaaaaaggtgaaagaagaggaagaggaggaggaaga
aggagaggaggaggaggagcaggaggaagaggaataaaaactctgtctcc
ttgtgaataccttagagtaggagagagctgtgattgacacatctcttatt
tgatcacgatcatattgtagtttctcaaagtttcagtggtttacatgaag
tggccgtgggtccggagcgccctgaaactgtatcaaagatgtacatagct
ccccacattttaaaaatgaaaaggcactctcacgtcctcctcactcagtg
cattttgctgttggtgtggcaaggcatttgaagatgtttctagctttttg
ttctcaactcataaggtagtgttaactatatggttactggctagaaatcc
tgagttgtcaactgtacatatctatattttgtaaagagaacaaaccaacc
cagacagaatcttgatgctccttgttttggtgtggaaggctgtgagggga
cgatgcctattgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_100742091_100743283
seq2: B6Ng01-217D14.b_46_1238 (reverse)

seq1  TTTTTTTAAG-ATGTGTCATCTTTAGCATTGCAAAGATG-AGGGTG-ATG  47
      ||||||| || |||| |||||  |||||||||||  ||| |||||| | |
seq2  TTTTTTTCAGAATGT-TCATC-CTAGCATTGCAAGAATGAAGGGTGAAGG  48

seq1  ATATTGGCAGCAACCTAGAAG-ATAAACATGTTTATTG-TTGAGGCTCAT  95
      ||| ||||||||  ||||||| ||||||||| |||||| | |||||||||
seq2  ATA-TGGCAGCA--CTAGAAGAATAAACATG-TTATTGCTGGAGGCTCAT  94

seq1  TGGGTTGCTATGGATGAAGCCACGCAC-TGATGAGAGTCT-CTTGTAGAC  143
      |||| ||||||| |||||  | ||||| |||||||||| | ||||||| |
seq2  TGGG-TGCTATGAATGAAAGCCCGCACTTGATGAGAGTTTCCTTGTAGCC  143

seq1  AGTAACCTGCTTAGTTAGATAGATTTAAAAGTCATTAGCTAAAACCTGTT  193
      ||||  |||  |||||||||||||||||| ||||||||||||||||||||
seq2  AGTA--CTGGCTAGTTAGATAGATTTAAAGGTCATTAGCTAAAACCTGTT  191

seq1  GTAAACTTCCTGCCATCATTAGGTAGTAAGCTTGTGGGTGTGTGAGTGCC  243
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTTCCTGCCATCATTAGGTAGTAAGCTTGTGGGTGTGTGAGTGCC  241

seq1  TGGCTAGGTTACAGGCTGCC-TCAAGAGGAGGCTAATGAAGCCCACGGGG  292
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGGCTAGGTTACAGGCTGCCTTCAAGAGGAGGCTAATGAAGCCCACGGGG  291

seq1  CCTGTGCAGGCAGCTGGTCCCACAGGACATTTCCTGGAATGTGAGCCAAG  342
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCTGTGCAGGCAGCTGGTCCCACAGGACATTTCCTGAAATGTGAGCCAAG  341

seq1  GTGGTTTCTCCCAGAATGAAAGGCTGAGCTCACATTGTGTGTGTTGGGGG  392
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTCTCTCAGAATGAAAGGCTGAGCTCACATTGTGTGTGTTGGGGG  391

seq1  GGGTGTCTGCTATTCATGTCTATGCATACATGTATGTGTGGTGCCTGCTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCTGCTATTCATGTCTATGCATACATGTATGTGTGGTGCCTGCTT  441

seq1  GTGGAAAATGGAGACCAGAGGTTGACTTTGGGTGTCTTCCTCAATCACAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAATGGAGACCAGAGGTTGACTTTGGGTGTCTTCCTCAATCACAC  491

seq1  TCCACCTAATTTTCTTTTTTGAGGCAGGGTCTTTCATTGAACCTGTAACT  542
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATAATTTTCTTTTTTGAGGCAGGGTCTTTCATTGAACCTGTAACT  541

seq1  TGCCATTTTGGCCAGACTGGCTGGCCAACAAACCTGAAGGCTACTCCTCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTTTGGCCAGACTGGCTGGCCAACAAACCTGAAGGCTACTCCTCC  591

seq1  TGTCTCTGTTTCCCCAGACCTAGGATTATAGGTGTCTGCTGCTGCACCCG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTTTCCCCAGACCTAGGATTATAGGTGTCTGCTGCTGCACCCG  641

seq1  GCTTTCACATGGGTGCTGGGGACCAAACTTAGGTCATCATGCTTGCAAGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCACATGGGTGCTGGGGACCAAACTTAGGTCATCATGCTTGCAAGA  691

seq1  CAAGCACTTTACCAGCTGAGCCGTCTCTTCAGCCCCTGAGCTCATACCTT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTTTACCAGCTGAGCCGTCTCTTCAGCCCCTGAGCTCATACCTT  741

seq1  GACAGCTGGGCTTAAGTCCTGGCCAGAGTTTAATAGAAAGAGAAAACCTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGGGCTTAAGTCCTGGCCAGAGTTTAATAGAAAGAGAAAACCTG  791

seq1  ACCAAAACCCAAGGGAACTCTGTCAGGATGAATGAGCTTCAGTCCCAGGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAACCCAAGGGAACTCTGTCAGGATGAATGAGCTTCAGTCCCAGGG  841

seq1  ATCAAAACTCCACTCAAGGGGCTGGAGAGGTAGCTCAGTGGTTAAGAGCG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACTCCACTCAAGGGGCTGGAGAGGTAGCTCAGTGGTTAAGAGCG  891

seq1  CTGGATGATCTTCCAGAGAACTCGGGTTCAATTCCCAGCACCCATGTGAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGATCTTCCAGAGAACTCGGGTTCAATTCCCAGCACCCATGTGAC  941

seq1  AGCTCACGACTGTCTTTAGCTCCAGTGCCAGGGAATCCCACATTCTCACA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACGACTGTCTTTAGCTCCAGTGCCAGGGAATCCCACATTCTCACA  991

seq1  CAGACACACATGCAGGCAAAACACCAATACATATCACACACACACACGCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACACATGCAGGCAAAACACCAATACATATCACACACACACACGCA  1041

seq1  CATGCACACTTTCCACTCAGACCAGCCAAGCTTTCAGGGGGCTGTCTTTG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACACTTTCCACTCAGACCAGCCAAGCTTTCAGGGGGCTGTCTTTG  1091

seq1  GGATGCTGCCAAGGACGGTAGTCATTGCTTCAGACTCCAGAGTCCTACTA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGCCAAGGACGGTAGTCATTGCTTCAGACTCCAGAGTCCTACTA  1141

seq1  ATAGCTATGGCGACTTCTCTTCTTAAGAGATTCCAGTGT-CTGACAGAAT  1191
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATAGCTATGGCGACTTCTCTTCTTAAGAGATTCCAGTGTCCTGACAGAAT  1191

seq1  TC  1193
      ||
seq2  TC  1193

seq1: chr6_100676525_100677236
seq2: B6Ng01-217D14.g_69_782

seq1  GAATTCCGCCCCAAGATCAAATCCACAAACCCTGGCATCTCCATTGGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGCCCCAAGATCAAATCCACAAACCCTGGCATCTCCATTGGCGA  50

seq1  TGTGGCAAAAAAGCTGGGTGAGATGTGAGACAACTTCAGTGACAATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAAAAAAGCTGGGTGAGATGTGAGACAACTTCAGTGACAATGAAA  100

seq1  AGCAGCCTACGTCACCAAGGCAGCAAAGCTGAAGGAGAAGGATGAGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTACGTCACCAAGGCAGCAAAGCTGAAGGAGAAGGATGAGAAGG  150

seq1  GTGTCGCTGACTGTCAGTCTAAAGGCAAGTTTGAGGGGGCCAAGGGGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCGCTGACTGTCAGTCTAAAGGCAAGTTTGAGGGGGCCAAGGGGCCT  200

seq1  GCTAAAGTTGCCCGGAAAAAGGTGAAAGAAGAGGAAGAGGAGGAGGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGTTGCCCGGAAAAAGGTGAAAGAAGAGGAAGAGGAGGAGGAAGA  250

seq1  AGGAGAGGAGGAGGAGGAGCAGGAGGAAGAGGAATAAAAACTCTGTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGAGGAGGAGGAGCAGGAGGAAGAGGAATAAAAACTCTGTCTCC  300

seq1  TTGTGAATACCTTAGAGTAGGAGAGAGCTGTGATTGACACATCTCTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAATACCTTAGAGTAGGAGAGAGCTGTGATTGACACATCTCTTATT  350

seq1  TGATCACGATCATATTGTAGTTTCTCAAAGTTTCAGTGGTTTACATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACGATCATATTGTAGTTTCTCAAAGTTTCAGTGGTTTACATGAAG  400

seq1  TGGCCGTGGGTCCGGAGCGCCCTGAAACTGTATCAAAGTTGTACATAGCT  450
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGCCGTGGGTCCGGAGCGCCCTGAAACTGTATCAAAGATGTACATAGCT  450

seq1  CCACACATTTTAAAAATGAAAAGGCACTCTCACGTCCTCCTCACTCAGTG  500
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACATTTTAAAAATGAAAAGGCACTCTCACGTCCTCCTCACTCAGTG  500

seq1  CATTTTGCTGTTGGTGTGGCAAGGCATTTGAAGATGTTTCTAGCATTTTG  550
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CATTTTGCTGTTGGTGTGGCAAGGCATTTGAAGATGTTTCTAGCTTTTTG  550

seq1  TTCTCAACTCATAAGGTAGTGTTAACTATATGGTTACTGGCTAGAAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACTCATAAGGTAGTGTTAACTATATGGTTACTGGCTAGAAATCC  600

seq1  TGAGTTGTCAACTGTACATATCTATAGTTTGTAAAGAGAACAAAACAACC  650
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  TGAGTTGTCAACTGTACATATCTATATTTTGTAAAGAGAACAAACCAACC  650

seq1  CAGACAGATTCTTGATGCTCCTTG-TTTGGTGTGG-AGGCTGTGAGGGGA  698
      |||||||| ||||||||||||||| |||||||||| ||||||||||||||
seq2  CAGACAGAATCTTGATGCTCCTTGTTTTGGTGTGGAAGGCTGTGAGGGGA  700

seq1  CGATGCCTTTTGGA  712
      |||||||| |||||
seq2  CGATGCCTATTGGA  714