BAC Information

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BAC

Clone NameB6Ng01-217I02
Chromosome6 (Build37)
Map Location 18,365,674 - 18,366,796
singlet/doubletsinglet
Overlap geneCttnbp2
Upstream geneMet, Capza2, St7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr
Downstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217I02.bB6Ng01-217I02.g
ACCGA033895GA033896
length1,138856
definitionB6Ng01-217I02.b B6Ng01-217I02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggggaaaacaaacctagatgaacacttgggcccagcaggttt
tccccaagagcttctacagccactgcacaacatttaaatggatgctaaag
aagagtcatagtctgtccagaagattgactgaaaatgacttttgagattc
tggaaagaaaactctacagggaaggtacagaaggcagacttgactagtta
cttgggactagttactgcagaagatccagttgaagctagaaagcagatga
gcttgttaaaaaaacaaaacaaacaaaaatcagggggaggcccaccagaa
cagatgctgcgaattgctagagtagccagaggggaaaggagcatggagca
gtattagaagccctgggaaagggggttgtcttggatactaacaatattaa
ataatgcggagaaccacagaagggtaggagggataggaagccacagactt
ggcgacagataagttagaagtctgacccacccacaggaagacagtcaaat
aatctcccaacagaaaatactctgaaaaactgtccatggtggctcatgtg
taaccccggcataagagaagctaggactgacagactgctgtgagttgatg
gctagtctgggctccactggcagttctagaccacagggttggctacacag
gcagttctacaccacagttctggctacacagacatgtctattgtatctca
atagaggcctctatatctcaaacaaaccaacaaagaaaacaaaaagcatt
aaaaaaatgaaaaaaatagataaatagataaatgaatgaagaagatttgt
ctgggaacataagcttttatcagtgacagaggagtttaactccaatcttc
tcagttcttgggcaggatttttgactttctcaagtttctcacaacaaaag
agtgagtttcactcagttctttgatctgcttccaggaaaacaaaagaagg
cttatccctgggttcacccttctcttctagcagctgctggttagaagtaa
tggctgaatacattatgcagctagagtcagaagcttcggggtactggttt
agttcaataatgtgtttcaccttataagggtgccagatcccctataagct
tctggctactttctctaagctcctccattgggccctag

gaattctttgctacatatatatctggtaaaggactaatatctaaaacata
caaagaactcaaaaaatagcaaagaatcaaacaatgcagtcagttagtag
gctaatgcaaagaacagaaacatcctcaaaaaaatgaaaagcaaaaggct
aagaaacatgaaaagcagttcaaattcaccagtcataggagaaatgcaaa
atgaaactacattgagatttcatcttgtgcaagcaggcatgacagtcatt
aaataaacagaaaacaaccatagatgaaataccctatagtggggagagga
aacttatagagtccacctccaggagaaagacaggacatcaagttgaaggg
atggagttgccattccacaggcaaaaactctgacccataattgtccctgt
ctaaaagaacttcagggtcaaaaatggagaagagcctgagggaaaggagg
tccagtgacaggcccaacttgggatccagctccaaggtctgacagtgtta
ctgatgtgcttaaaaagcaggatcctagcatggctactctctgagaggcc
caataagcagctaaaagagtcagatgcagatacttacacccaaccaatgg
accacccctgtggtagaattaagggaaggatggaagaagcagaggaggag
agtgaccctataagaaaacccagcagtatcaactaacttggaccccagag
atctctcagcgctatcaaccagacagccccagctgatatgagacccctga
cacctatacaacaaaggactggcttgtctggccttagtgagagaagaggc
acccaaccctctagagacttgagactccagggagtagggaggtatgggtg
gggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18365674_18366796
seq2: B6Ng01-217I02.b_45_1182

seq1  GAATTCCAGGGGAAAACAAACCTAGATGAACACTTGGGCCCAGCAGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGGAAAACAAACCTAGATGAACACTTGGGCCCAGCAGGTTT  50

seq1  TCCCCAAGAGCTTCTACAGCCACTGCACAACATTTAAATGGATGCTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAGAGCTTCTACAGCCACTGCACAACATTTAAATGGATGCTAAAG  100

seq1  AAGAGTCATAGTCTGTCCAGAAGATTGACTGAAAATGACTTTTGAGATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCATAGTCTGTCCAGAAGATTGACTGAAAATGACTTTTGAGATTC  150

seq1  TGGAAAGAAAACTCTACAGGGAAGGTACAGAAGGCAGACTTGACTAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAAAACTCTACAGGGAAGGTACAGAAGGCAGACTTGACTAGTTA  200

seq1  CTTGGGACTAGTTACTGCAGAAGATCCAGTTGAAGCTAGAAAGCAGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGACTAGTTACTGCAGAAGATCCAGTTGAAGCTAGAAAGCAGATGA  250

seq1  GCTTGTTAAAAAAACAAAACAAACAAAAATCAGGGGGAGGCCCACCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTAAAAAAACAAAACAAACAAAAATCAGGGGGAGGCCCACCAGAA  300

seq1  CAGATGCTGCGAATTGCTAGAGTAGCCAGAGGGGAAAGGAGCATGGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTGCGAATTGCTAGAGTAGCCAGAGGGGAAAGGAGCATGGAGCA  350

seq1  GTATTAGAAGCCCTGGGAAAGGGGGTTGTCTTGGATACTAACAATATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAGAAGCCCTGGGAAAGGGGGTTGTCTTGGATACTAACAATATTAA  400

seq1  ATAATGCGGAGAACCACAGAAGGGTAGGAGGGATAGGAAGCCACAGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCGGAGAACCACAGAAGGGTAGGAGGGATAGGAAGCCACAGACTT  450

seq1  GGCGACAGATAAGTTAGAAGTCTGACCCACCCACAGGAAGACAGTCAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACAGATAAGTTAGAAGTCTGACCCACCCACAGGAAGACAGTCAAAT  500

seq1  AATCTCCCAACAGAAAATACTCTGAAAAACTGTCCATGGTGGCTCATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCCAACAGAAAATACTCTGAAAAACTGTCCATGGTGGCTCATGTG  550

seq1  TAACCCCGGCATAAGAGAAGCTAGGACTGACAGACTGCTGTGAGTTGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCGGCATAAGAGAAGCTAGGACTGACAGACTGCTGTGAGTTGATG  600

seq1  GCTAGTCTGGGCTCCACTGGCAGTTCTAGACCACAGGGTTGGCTACACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCTGGGCTCCACTGGCAGTTCTAGACCACAGGGTTGGCTACACAG  650

seq1  GCAGTTCTACACCACAGTTCTGGCTACACAGACATGTCTATTGTATCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCTACACCACAGTTCTGGCTACACAGACATGTCTATTGTATCTCA  700

seq1  ATAGAGGCCTCTATATCTCAAACAAACCAACAAAGAAAACAAAAAGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGCCTCTATATCTCAAACAAACCAACAAAGAAAACAAAAAGCATT  750

seq1  AAAAAAATGAAAAAAATAGATAAATAGATAAATGAATGAAGAAGATTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGAAAAAAATAGATAAATAGATAAATGAATGAAGAAGATTTGT  800

seq1  CTGGGAACATAAGCTTTTATCAGTGACAGAGGAGTTTAACTCCAATCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAACATAAGCTTTTATCAGTGACAGAGGAGTTTAACTCCAATCTTC  850

seq1  TCAGTTCTTGGGCAGGA-TTTTGAC-TTCTCAAAGTTCTCACAACAAAAG  898
      ||||||||||||||||| ||||||| |||||||  |||||||||||||||
seq2  TCAGTTCTTGGGCAGGATTTTTGACTTTCTCAAGTTTCTCACAACAAAAG  900

seq1  AGTGAGTTTCACTCAGTTCTTTGATCTGCTTCCAGG-AAACAAAGAAGGG  947
      |||||||||||||||||||||||||||||||||||| |||||||  | ||
seq2  AGTGAGTTTCACTCAGTTCTTTGATCTGCTTCCAGGAAAACAAAAGAAGG  950

seq1  CTTATCCCT-GGTTCAACCTTCTC-TCTAGCAGCTGCT-GTTAGAAGTAA  994
      ||||||||| |||||| ||||||| ||||||||||||| |||||||||||
seq2  CTTATCCCTGGGTTCACCCTTCTCTTCTAGCAGCTGCTGGTTAGAAGTAA  1000

seq1  TGGCTG-ATACA-TATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGG-TT  1041
      |||||| ||||| ||||||||||||||||  |||| ||||||||||| ||
seq2  TGGCTGAATACATTATGCAGCTAGAGTCAGAAGCTTCGGGGTACTGGTTT  1050

seq1  AGTTC-ATAATGTTGTTCCACC-TAT-AGGGTTGCAGATCCC--TTTAGC  1086
      ||||| |||||| |||| |||| ||| |||||  ||||||||   | |||
seq2  AGTTCAATAATG-TGTTTCACCTTATAAGGGTGCCAGATCCCCTATAAGC  1099

seq1  TTCTTGGCTACTTTCTCT-AGCTCCTCCATTGG--CCTAG  1123
      ||| |||||||||||||| ||||||||||||||  |||||
seq2  TTC-TGGCTACTTTCTCTAAGCTCCTCCATTGGGCCCTAG  1138


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