BAC Information

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BAC

Clone NameB6Ng01-217I11
Chromosome6 (Build37)
Map Location 64,180,133 - 64,181,059
singlet/doubletsinglet
Overlap geneGrid2
Upstream genenone
Downstream geneAtoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217I11.bB6Ng01-217I11.g
ACCGA033913GA033914
length1,250935
definitionB6Ng01-217I11.b B6Ng01-217I11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctccttgagtaccaccctgccctgggacattaattatatcctct
cccattgaatccggaccaggcagtccagctaaaggaaggggatccaatga
caaaaacagtcagaggcagcccctgctcttgttagcagacccatttgaag
attaagctgcttgctcattagcctcaaatatgtatagcatcctaggtcca
atccatttcttggtttcccctctggaaaccccctaacccctccctcctcc
ccagctcaacaacacacccaccccactttctggccctggcattcccctac
gctgggacatagagccttcacaggacaaagggcctctcccatagatggcc
tacaaggccatcctctgctacctatgcagctagagccatgagtgccccca
tgtgtactctttggttggtggtttagtccctaggagttctggcagtactg
attggttcatattattgttccccttatgggtctgcaaaacccttcagctc
cttcggtcctttctttagctcctccaatggggttcctgtgctcagtccat
tgcttcctgtgagcatccacctctgtatttgtcaggctctggcagagcct
tccaggagacagctatatcaggcttctgtcagcaagcaattcttaacaac
cacaatagtgtctggatttggtgtctctataggagatggattcccaggta
gggccttctccggatggcctttcctacagtctctgctccacactttgtct
ccatacgtcctcccttgagaattttgtcaccgtctctaagaaggactgaa
gcatccacacgttgatcttctttctttttgagcttcatgtgatctatcaa
tttatcttgagtattctgagattttaggctaatatccaattatcagtaag
tgcataccatgcatgttcttttgtgattgggctgcttcactcacgaagat
attttctagtcccatccatttgcctaagaatttcatgaattcattgtttt
aatagctgagtagtactccaattgagttaaatgtaaccacatttttcttg
tattcatttctctggttggagggacaactctgggttcttttccagctctc
tggctcattataaataagcctgcaatgaacatatatgagacagtgggtcc
ttattatactagtttggaaatctctggagtatagtccagaagagaagccc
ggatattcaatttccggtcactagcgcacatcggagattggagaaggtct

gaattcctatgccaagccaatgcttatacaagggtactggactcacatga
gagtgatgagtaaaggtgtgtttctgataaaactggaacgagacacaact
gttattggttcctgttcatgtgttcttagtctctttattaaaataattca
aagtgaactaaaagaaagctcaaagatcagttcattagaatttaagagaa
gaacaacagagcaggcaagccatgagttttaccagcaactagaagaagaa
aaatgaaataggaagacaggagaatttgggaagggactcaaggaaaatac
agtacaagctatctgataggggagatcggaaaactgagcgctccatagtg
aggggtaaataataagggaggtaggtgaaataacaatatggatagttaaa
aagcaacaagaaattatattgctaattatttacacacacacacacatcaa
ttaaaatacaatcacaaggctgggcagtgcttttgtacaccttgaatccc
agcacttggcaggtataggaaggtaaatttctgaatttttttcttgtatt
aggtattttcctcatttacatttccaatgctatcccaaaagtccccaata
ccctccctccccccactcccctacccacccactcccactttttggccctg
gcgttcccctgtactggggcatataaagtttacaagtccaatggggcctc
ttctttgcagtgatggctgactaggccatcttttaatacacccaacctgg
tatactgacagagttccaggacagccagggctacagagaaaaccctttct
ttacaacctgataataatgtctcaaaattgaaacattaaaaaggaagtta
taatctttgatattagggttcaagaaaacagaacaggttaacagtagaaa
gtgggcccccttgctgcatggggatggtgattgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_64180133_64181059
seq2: B6Ng01-217I11.g_70_1004 (reverse)

seq1  CACAATCA-CATCACCATGCAGC-AGTGTGCCCAC-TTCTACTGTTTAAC  47
      |||||||| |||| ||||||||| || | |||||| |||||||| |||||
seq2  CACAATCACCATCCCCATGCAGCAAGGGGGCCCACTTTCTACTG-TTAAC  49

seq1  CTG-TCTGTTTTCTTGAACCCTAATATCAAAGATTATAACTTCCTTTTTA  96
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTGTTTTCTTGAACCCTAATATCAAAGATTATAACTTCCTTTTTA  99

seq1  TTGTTTC-ATTTTGAGACATTATTATCAGGTTGTTAAGAAA-GGTTTTCT  144
       |||||| |||||||||||||||||||||||||| |||||| ||||||||
seq2  ATGTTTCAATTTTGAGACATTATTATCAGGTTGTAAAGAAAGGGTTTTCT  149

seq1  CTGTAGCCCTGGCTGTCCTGGAACTCTGTCCGTATACCAGGTT-GGTGTA  193
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  CTGTAGCCCTGGCTGTCCTGGAACTCTGTCAGTATACCAGGTTGGGTGTA  199

seq1  TTAAAAGATGGCCTAGTCAGCCATCACTGCAAAG-AGAGG-CCCATTGGA  241
      |||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  TTAAAAGATGGCCTAGTCAGCCATCACTGCAAAGAAGAGGCCCCATTGGA  249

seq1  CTTGTAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGT  299

seq1  GGGAGTGGGTGGGTAGGGGAGTGGGGGGAGGGAGGGTATTGGGGACTTTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGGGTGGGTAGGGGAGTGGGGGGAGGGAGGGTATTGGGGACTTTT  349

seq1  GGGATAGCATTGGAAATGTAAATGAGGAAAATACCTAATACAAGAAAAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGCATTGGAAATGTAAATGAGGAAAATACCTAATACAAGAAAAAA  399

seq1  ATTCAGAAATTTACCTTCCTATACCTGCCAAGTGCTGGGATTCAAGGTGT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAAATTTACCTTCCTATACCTGCCAAGTGCTGGGATTCAAGGTGT  449

seq1  ACAAAAGCACTGCCCAGCCTTGTGATTGTATTTTAATTGATGTGTGTGTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCACTGCCCAGCCTTGTGATTGTATTTTAATTGATGTGTGTGTG  499

seq1  TGTGTAAATAATTAGCAATATAATTTCTTGTTGCTTTTTAACTATCCATA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAATAATTAGCAATATAATTTCTTGTTGCTTTTTAACTATCCATA  549

seq1  TTGTTATTTCACCTACCTCCCTTATTATTTACCCCTCACTATGGAGCGCT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTTCACCTACCTCCCTTATTATTTACCCCTCACTATGGAGCGCT  599

seq1  CAGTTTTCCGATCTCCCCTATCAGATAGCTTGTACTGTATTTTCCTTGAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCCGATCTCCCCTATCAGATAGCTTGTACTGTATTTTCCTTGAG  649

seq1  TCCCTTCCCAAATTCTCCTGTCTTCCTATTTCATTTTTCTTCTTCTAGTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCCCAAATTCTCCTGTCTTCCTATTTCATTTTTCTTCTTCTAGTT  699

seq1  GCTGGTAAAACTCATGGCTTGCCTGCTCTGTTGTTCTTCTCTTAAATTCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTAAAACTCATGGCTTGCCTGCTCTGTTGTTCTTCTCTTAAATTCT  749

seq1  AATGAACTGATCTTTGAGCTTTCTTTTAGTTCACTTTGAATTATTTTAAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTGATCTTTGAGCTTTCTTTTAGTTCACTTTGAATTATTTTAAT  799

seq1  AAAGAGACTAAGAACACATGAACAGGAACCAATAACAGTTGTGTCTCGTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACTAAGAACACATGAACAGGAACCAATAACAGTTGTGTCTCGTT  849

seq1  CCAGTTTTATCAGAAACACACCTTTACTCATCACTCTCATGTGAGTCCAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTTATCAGAAACACACCTTTACTCATCACTCTCATGTGAGTCCAG  899

seq1  TACCCTTGTATAAGCATTGGCTTGGCATAGGAATTC  927
      ||||||||||||||||||||||||||||||||||||
seq2  TACCCTTGTATAAGCATTGGCTTGGCATAGGAATTC  935