BAC Information

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BAC

Clone NameB6Ng01-219P20
Chromosome6 (Build37)
Map Location 128,493,982 - 128,626,463
singlet/doubletdoublet
Overlap geneBC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863
Upstream geneEfcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610
Downstream geneLOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219P20.bB6Ng01-219P20.g
ACCGA035666GA035667
length4581,127
definitionB6Ng01-219P20.b B6Ng01-219P20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,493,982 - 128,494,445)(128,625,344 - 128,626,463)
sequence
atctgaagagttgctttttccagttttcacggaaagggaaaatcctgagg
cctccttaggaagtggcacgttgtacctgagggtggcctgggaagaagga
agacatcttgaaaatcatcctgcagtaaacactgaagaacctgttatctg
tataactccattattaatgtgctttatagtgttatcatcagggaaccagg
atcaacgaaatgtttatggggacagcgtgatgatgtgactggctgagggc
agaatgctttctatcagaagaaccaatttaattactaaaaatgtttaatt
tatatatgtgtgtgtgttggggggactagaaagaacattatgaaatggaa
agaagagctcttatttggggagatagtggggtgcatatgacatgaaagca
gaagggggatattgctggggtggtccttcaacaaaagggggtaagggggg
tgatggga
gaattccatacgtgtgtatgccatttgaattttactctttactagattct
tttcagatcaggaaaaattgtccaagctgccccctgggctcccactttgt
ccttagctctttcacagtgtccaacggtgtctgggatgctcgagacggag
aacctgttatctctggcatccatgaggctcagagacctcggaatgccact
tgtccacacaccccaactcccgcgggctggggttctctggcttcccacag
ccagacacccacccggggccacgttgaaagtttgcagcagtactcctgag
tatggccgcccagagcaccagtactctggcgggactcaggttgtctccta
ctcaggttgtccggtgcccaacactcctctaaactaattttcatcttggc
tgtcaatgtgattattgctggattttgataatggttttggtttttgataa
tggttttggttgatcaggagcagagcaccaactgtagataacaggtcata
gagcatctgattgattctcacacatgccttggtacacttcctactctgga
tttacaactactgacaaacttgctacaaatccacttcctatgtgtgtagc
tcctgccactgctgatcccattatcactcaggaagccacattctcctcct
cctctcgtgagaaccctaaatcaaaataaataaataaataaataaataaa
taaacaatcaatagttactgcacacgtcaacagtgcatttaaacaccagt
gctagttgcactgagaatgttttacatcttcagggctcaatttgaaccac
accttcattattcttcagtgttgaactatgtaatgtgtacaaggaaattg
actggtgtttgctgccattttcaaacaaacttgctgccacatctgacctc
actgatggagattttcagttctactttgaagtatttttattataagttat
accagttggaggaaaaaccccattcttagtaaatgtctgaaagggccttt
tatgatgcctgtggaatgggtctgtgtttttaatcccctccaggtgaatg
actcactcaaatgctctggcatgcttacaacacagagctacttcatgagt
tttgaatgaaagacttgaagaggttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128493982_128494445
seq2: B6Ng01-219P20.b_47_510

seq1  GAATTCATCTGAAGAGTTGCTTTTTCCAGTTTTCACGGAAAGGGAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGAAGAGTTGCTTTTTCCAGTTTTCACGGAAAGGGAAAATC  50

seq1  CTGAGGCCTCCTTAGGAAGTGGCACGTTGTACCTGAGGGTGGCCTGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCTCCTTAGGAAGTGGCACGTTGTACCTGAGGGTGGCCTGGGAA  100

seq1  GAAGGAAGACATCTTGAAAATCATCCTGCAGTAAACACTGAAGAACCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGACATCTTGAAAATCATCCTGCAGTAAACACTGAAGAACCTGT  150

seq1  TATCTGTATAACTCCATTATTAATGTGCTTTATAGTGTTATCATCAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTATAACTCCATTATTAATGTGCTTTATAGTGTTATCATCAGGGA  200

seq1  ACCAGGATCAACGAAATGTTTATGGGGACAGCGTGATGATGTGACTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGATCAACGAAATGTTTATGGGGACAGCGTGATGATGTGACTGGCT  250

seq1  GAGGGCAGAATGCTTTCTATCAGAAGAACCAATTTAATTACTAAAAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAGAATGCTTTCTATCAGAAGAACCAATTTAATTACTAAAAATGT  300

seq1  TTAATTTATATATGTGTGTGTGTTGGGGGGACTAGAAAGAACATTATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTATATATGTGTGTGTGTTGGGGGGACTAGAAAGAACATTATGAA  350

seq1  ATGGAAAGAAGAGCTCTTATTTGGGGAGATAGTGGGGTGCATATGACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAGAAGAGCTCTTATTTGGGGAGATAGTGGGGTGCATATGACATG  400

seq1  AAAGCAGAAGGGGGATATTGCTGGGGTGGTCCTTCAACAAAAGGGGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAAGGGGGATATTGCTGGGGTGGTCCTTCAACAAAAGGGGGTAA  450

seq1  GGGGGGTGATGGGA  464
      ||||||||||||||
seq2  GGGGGGTGATGGGA  464

seq1: chr6_128625344_128626463
seq2: B6Ng01-219P20.g_67_1193 (reverse)

seq1  GGAACCTCTCTAAAGTCTTCTCA-TCAAAACTCATGAGATAGCTCTTGTG  49
      ||||||||| | ||||||| ||| |||||||||||||  |||||| ||||
seq2  GGAACCTCT-TCAAGTCTT-TCATTCAAAACTCATGAAGTAGCTC-TGTG  47

seq1  -TGTGAGCATGGCTAGCCATTTTGAGTGGAGTCATTTCACTGGA-GTGAT  97
       ||| ||||| || ||    ||||||| ||||||||   ||||| | |||
seq2  TTGTAAGCAT-GCCAGAGCATTTGAGT-GAGTCATTCACCTGGAGGGGAT  95

seq1  --AAAACACAGACCCATT-CACAGCCATCATAAAAGG-CCTTTCAGACAT  143
        |||||||||||||||| ||||| |||||||||||| ||||||||||||
seq2  TAAAAACACAGACCCATTCCACAGGCATCATAAAAGGCCCTTTCAGACAT  145

seq1  TTACTAAGAATTGGGTTTTTCCTC--ACTTGTATAACTTATA--TAAAAT  189
      ||||||||||| ||||||||||||  ||| ||||||||||||   |||||
seq2  TTACTAAGAATGGGGTTTTTCCTCCAACTGGTATAACTTATAATAAAAAT  195

seq1  ACTTCAAAGTAGAACTGAAAATCTCCATCAGTGAGGTCAGATGTGGCAGC  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAGTAGAACTGAAAATCTCCATCAGTGAGGTCAGATGTGGCAGC  245

seq1  -AGTTTGTTTGAAAATGGCAGCAAACACCAGTCAATTTCCTTGTACACAT  288
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTTTGAAAATGGCAGCAAACACCAGTCAATTTCCTTGTACACAT  295

seq1  TACATAGTTCAACACTGAAGAATAATGAAGGTGTGGTTCAAATTGAGCCC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTTCAACACTGAAGAATAATGAAGGTGTGGTTCAAATTGAGCCC  345

seq1  TGAAGATGTAAAACATTCTCAGTGCAACTAGCACTGGTGTTTAAATGCAC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGTAAAACATTCTCAGTGCAACTAGCACTGGTGTTTAAATGCAC  395

seq1  TGTTGACGTGTGCAGTAACTATTGATTGTTTATTTATTTATTTATTTATT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACGTGTGCAGTAACTATTGATTGTTTATTTATTTATTTATTTATT  445

seq1  TATTTATTTTGATTTAGGGTTCTCACGAGAGGAGGAGGAGAATGTGGCTT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTGATTTAGGGTTCTCACGAGAGGAGGAGGAGAATGTGGCTT  495

seq1  CCTGAGTGATAATGGGATCAGCAGTGGCAGGAGCTACACACATAGGAAGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTGATAATGGGATCAGCAGTGGCAGGAGCTACACACATAGGAAGT  545

seq1  GGATTTGTAGCAAGTTTGTCAGTAGTTGTAAATCCAGAGTAGGAAGTGTA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGTAGCAAGTTTGTCAGTAGTTGTAAATCCAGAGTAGGAAGTGTA  595

seq1  CCAAGGCATGTGTGAGAATCAATCAGATGCTCTATGACCTGTTATCTACA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCATGTGTGAGAATCAATCAGATGCTCTATGACCTGTTATCTACA  645

seq1  GTTGGTGCTCTGCTCCTGATCAACCAAAACCATTATCAAAAACCAAAACC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGCTCTGCTCCTGATCAACCAAAACCATTATCAAAAACCAAAACC  695

seq1  ATTATCAAAATCCAGCAATAATCACATTGACAGCCAAGATGAAAATTAGT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAAAATCCAGCAATAATCACATTGACAGCCAAGATGAAAATTAGT  745

seq1  TTAGAGGAGTGTTGGGCACCGGACAACCTGAGTAGGAGACAACCTGAGTC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGAGTGTTGGGCACCGGACAACCTGAGTAGGAGACAACCTGAGTC  795

seq1  CCGCCAGAGTACTGGTGCTCTGGGCGGCCATACTCAGGAGTACTGCTGCA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCAGAGTACTGGTGCTCTGGGCGGCCATACTCAGGAGTACTGCTGCA  845

seq1  AACTTTCAACGTGGCCCCGGGTGGGTGTCTGGCTGTGGGAAGCCAGAGAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCAACGTGGCCCCGGGTGGGTGTCTGGCTGTGGGAAGCCAGAGAA  895

seq1  CCCCAGCCCGCGGGAGTTGGGGTGTGTGGACAAGTGGCATTCCGAGGTCT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCCGCGGGAGTTGGGGTGTGTGGACAAGTGGCATTCCGAGGTCT  945

seq1  CTGAGCCTCATGGATGCCAGAGATAACAGGTTCTCCGTCTCGAGCATCCC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTCATGGATGCCAGAGATAACAGGTTCTCCGTCTCGAGCATCCC  995

seq1  AGACACCGTTGGACACTGTGAAAGAGCTAAGGACAAAGTGGGAGCCCAGG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCGTTGGACACTGTGAAAGAGCTAAGGACAAAGTGGGAGCCCAGG  1045

seq1  GGGCAGCTTGGACAATTTTTCCTGATCTGAAAAGAATCTAGTAAAGAGTA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCTTGGACAATTTTTCCTGATCTGAAAAGAATCTAGTAAAGAGTA  1095

seq1  AAATTCAAATGGCATACACACGTATGGAATTC  1120
      ||||||||||||||||||||||||||||||||
seq2  AAATTCAAATGGCATACACACGTATGGAATTC  1127