BAC Information

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BAC

Clone NameB6Ng01-221B04
Chromosome10 (Build37)6 (Build37)
Map Location 24,499,646 - 24,499,82162,499,025 - 62,500,212
singlet/doubletsingletsinglet
Overlap geneEnpp3
Upstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1, LOC628537, Ctgf, Enpp1
Downstream geneCrsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik, EG667513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221B04.bB6Ng01-221B04.g
ACCGA036463GA036464
length5231,199
definitionB6Ng01-221B04.b B6Ng01-221B04.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(24,499,646 - 24,499,821)(62,499,025 - 62,500,212)
sequence
cttttcacttgattacttcctttacatcataaaatactttatgtttcatg
atgttccatttgttagttgacctcctgaacttgagagcaaatgggtttta
ttcagaaactccttccctgaatctatcacatgtgagatactttttgttta
atcctagaaattgtagcatttctgatttgacattgagggctttgatcctt
ggtaggttttttgtttgttgtttgttttgttttgtgttttgtgcagggtg
atagatagatgagaatgtttgttgtgtgaatgccaaatatagcctttatt
atgttgagttttatcatgaagatacattggattttgttaaagtcccaagt
gcactgtaatgttcatgtgatatttttttattcataggttaattatataa
tttattacatttgttttcttattatgttaaactaccttttcatctctgga
ataagaaaaatttaattatgacagatatctttgatatgtatgtatatata
tgtatatatatatatgtatatat
gaattccaagttgaataatgcattcatattttcagtcaggagggtacagt
atattctccaaaatgttcaccaggtatcttttaccagaatctttggtgtg
actattgactcaaaaaatatatcgcgtatgctgtttgataaaattgatga
aacaattctctataaatttaatacaatatggttgctcttgatgaatagtt
ctcaatgatgtagagcagtgccaaagttgaaacaaaacaaaatgaaacac
taatgagacaaacagattggcaacccttatctactgttaggaatattatc
aattggcagttcttttcctgggtgtcagattctatcaccctatattatag
cttatcacataagtgtttaataactaaggaaacagaactatagagatcta
cctcttaaaactggttccatttcaaaagctttcatcagagctcaaacatc
atttctatactgtctttcaattgtttatgtctcttttggtagtagcagta
gcttgcaacttttttaatctgaaatacattttacaatcttgatatcttca
aattgttctcattttagaagcagtactataaagttttgaatggtattctg
tgtcatatatctaaggcctgattatatttatagtactgtctacaatttgg
gtgtaccttccatagattcttattgccacacttaacccccaatatctgac
ttatacagtgtatttgcagcacaattatttaatcacagcttcttatcttt
ggttaatctaaatcataatcagccatttcattatcatgaatggtttaaga
agacactggatatttcgaatagctgttatttacataaataagagcaactg
aaattcagtagtgacattgtaagagtattaatattcattaagaaacacca
tattattgaagatgcggtcttctttccaatggatgggttttagctcctgt
gtcaaagatcaagtgaccataggtgtggtgaattcatttctgggtcttaa
ttctggttcattgatttgtctgtcattgtaccagtaccacactagaattt
ttatcatagttgctctgtagtacagcttggaaggtcagggattgtgattt
cacgagagattctttttattattgagaaatagttttgttttttcagaatg
aatggcaatgtccttaaagctggtggagaattgtaactccataaaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24499646_24499821
seq2: B6Ng01-221B04.b_534_573 (reverse)

seq1  ATATATACATACATATATGTGTGTGTGTATATATATATATATATATATAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  ATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100
                                                        
seq2  --------------------------------------------------  0

seq1  GTGTGTATACGTGTGTATGTGTGTTTGTATATATATATATACATATATAG  150
                                        ||||||||||||||| 
seq2  ----------------------------------ATATATACATATATA-  15

seq1  GTATACACACACATATACATACATAT  176
       |||| ||| | ||||||||||||||
seq2  -TATATACATATATATACATACATAT  40

seq1: chr6_62499025_62500212
seq2: B6Ng01-221B04.g_63_1261 (reverse)

seq1  CAGTTTTATGAGGT--CAATTCTTCA-CAGCTTTAGGGCAATTTGCAAAT  47
      ||||||||||  ||  ||||||| || |||||||| ||  |||  |  ||
seq2  CAGTTTTATGGAGTTACAATTCTCCACCAGCTTTAAGGACATTGCC--AT  48

seq1  TCA-TCTGGAAAAACAAAAACTA-TTCTCAATAAT-AAAAGAACCTCTGG  94
      ||| |||| |||||| ||||||| ||||||||||| ||||||| |||| |
seq2  TCATTCTGAAAAAAC-AAAACTATTTCTCAATAATAAAAAGAATCTCTCG  97

seq1  TGAAATCACAATCCCTGACCT--CAAGCTGTACTACAGAGCAACTATGAT  142
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  TGAAATCACAATCCCTGACCTTCCAAGCTGTACTACAGAGCAACTATGAT  147

seq1  AAAA--TCT-GTGTGGTACTGGTACAATGACAGACAAATCAATGGAACAG  189
      ||||  ||| |||||||||||||||||||||||||||||||||| | |||
seq2  AAAAATTCTAGTGTGGTACTGGTACAATGACAGACAAATCAATGAACCAG  197

seq1  AATTAAGACCCAGAAATGAATTCA-CACACCTATGGTCACTTGATCTTTG  238
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AATTAAGACCCAGAAATGAATTCACCACACCTATGGTCACTTGATCTTTG  247

seq1  ACACAGGAGCTAAAA-CCATCCATTGGAAAGAAGACCGCATCTTCAATAA  287
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACACAGGAGCTAAAACCCATCCATTGGAAAGAAGACCGCATCTTCAATAA  297

seq1  TATGGTGTTTCTTAATGAATATTAATACTCTTACAATGTCACTACTGAAT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGTTTCTTAATGAATATTAATACTCTTACAATGTCACTACTGAAT  347

seq1  TTCAGTTGCTCTTATTTATGTAAATAACAGCTATTCGAAATATCCAGTGT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTGCTCTTATTTATGTAAATAACAGCTATTCGAAATATCCAGTGT  397

seq1  CTTCTTAAACCATTCATGATAATGAAATGGCTGATTATGATTTAGATTAA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAAACCATTCATGATAATGAAATGGCTGATTATGATTTAGATTAA  447

seq1  CC-AAGATAAGAAGCTGTGATTAAATAATTGTGCTGCAAATACACTGTAT  486
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGATAAGAAGCTGTGATTAAATAATTGTGCTGCAAATACACTGTAT  497

seq1  AAGTCAGATATTGGGGGTTAAGTGTGGCAATAAGAATCTATGGAAGGTAC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGATATTGGGGGTTAAGTGTGGCAATAAGAATCTATGGAAGGTAC  547

seq1  ACCCAAATTGTAGACAGTACTATAAATATAATCAGGCCTTAGATATATGA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAATTGTAGACAGTACTATAAATATAATCAGGCCTTAGATATATGA  597

seq1  CACAGAATACCATTCAAAACTTTATAGTACTGCTTCTAAAATGAGAACAA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAATACCATTCAAAACTTTATAGTACTGCTTCTAAAATGAGAACAA  647

seq1  TTTGAAGATATCAAGATTGTAAAATGTATTTCAGATTAAAAAAGTTGCAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGATATCAAGATTGTAAAATGTATTTCAGATTAAAAAAGTTGCAA  697

seq1  GCTACTGCTACTACCAAAAGAGACATAAACAATTGAAAGACAGTATAGAA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGCTACTACCAAAAGAGACATAAACAATTGAAAGACAGTATAGAA  747

seq1  ATGATGTTTGAGCTCTGATGAAAGCTTTTGAAATGGAACCAGTTTTAAGA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTTTGAGCTCTGATGAAAGCTTTTGAAATGGAACCAGTTTTAAGA  797

seq1  GGTAGATCTCTATAGTTCTGTTTCCTTAGTTATTAAACACTTATGTGATA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATCTCTATAGTTCTGTTTCCTTAGTTATTAAACACTTATGTGATA  847

seq1  AGCTATAATATAGGGTGATAGAATCTGACACCCAGGAAAAGAACTGCCAA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAATATAGGGTGATAGAATCTGACACCCAGGAAAAGAACTGCCAA  897

seq1  TTGATAATATTCCTAACAGTAGATAAGGGTTGCCAATCTGTTTGTCTCAT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAATATTCCTAACAGTAGATAAGGGTTGCCAATCTGTTTGTCTCAT  947

seq1  TAGTGTTTCATTTTGTTTTGTTTCAACTTTGGCACTGCTCTACATCATTG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTCATTTTGTTTTGTTTCAACTTTGGCACTGCTCTACATCATTG  997

seq1  AGAACTATTCATCAAGAGCAACCATATTGTATTAAATTTATAGAGAATTG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATTCATCAAGAGCAACCATATTGTATTAAATTTATAGAGAATTG  1047

seq1  TTTCATCAATTTTATCAAACAGCATACGCGATATATTTTTTGAGTCAATA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCAATTTTATCAAACAGCATACGCGATATATTTTTTGAGTCAATA  1097

seq1  GTCACACCAAAGATTCTGGTAAAAGATACCTGGTGAACATTTTGGAGAAT  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACCAAAGATTCTGGTAAAAGATACCTGGTGAACATTTTGGAGAAT  1147

seq1  ATACTGTACCCTCCTGACTGAAAATATGAATGCATTATTCAACTTGGAAT  1186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTACCCTCCTGACTGAAAATATGAATGCATTATTCAACTTGGAAT  1197

seq1  TC  1188
      ||
seq2  TC  1199