BAC Information

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BAC

Clone NameB6Ng01-221L16
Chromosome6 (Build37)
Map Location 74,037,986 - 74,191,922
singlet/doubletdoublet
Overlap genenone
Upstream geneDnahc6, Suclg1, Olfr210-ps1, 4931417E11Rik, LOC100043338
Downstream geneEG668132, LOC668136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221L16.bB6Ng01-221L16.g
ACCGA036942GA036943
length1,120865
definitionB6Ng01-221L16.b B6Ng01-221L16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,190,820 - 74,191,922)(74,037,986 - 74,038,760)
sequence
gaattcatttcagacctgatactttttcttctaagcctatctgactgaaa
atagtatgtctgagccctagaaaaagtaattcctaggccagattgatcct
gggcttccctcaattcatgatttcaaatggcttaccttccctatcgattt
ctttcttcctgaaccagctaatcaaatctcttcatcccggtcctcaaatc
cctgagctggagctgatcatccttcattctctcctatcgctttgcctctg
tgaaagtcttagtctctctccctttacctcccaatgccacttcaaagttt
gcctgttatccaacttcaggaaaacatcatccaagttcaattatttggag
gaaaaaaaactaacatacaagaacttcacgatgaaaagggcagtgctgaa
tacaccctgtgaacacccatctgctttcctcttttggaggaaacattctc
tcaaaactgccagcttcctttctacatagagagaatgcatgtagctattt
tcccatctcttcagattcttggggggaaaaaatcacagaataaaatacat
tataggtcattgtattttaggaacagacaaattaacttacaaacaaacat
tataatttttaaaaactgggattgtctcaaaatatgacccttgctggtgt
agtcgtatggtgcactgtgagttcatgtctctaatggtgccttcctgtcc
cacaaatagactttagctgcagaaaaccacaccactcatggcttatctca
caaatgacaaatggaccaatgcatttcaactgatcagaatgcaagctttg
cactgttaaatttctttcttttttttcaaggccccagaactctgatcctt
ttagtcttggttgcactgaaaagccatcctaaaagcaggctagcctgagg
ttgaaatgttcccaataatactgtttcatcatgtgacagctaccccaagc
ccagtctgcaatacactttaagttgttggcatcattttcattgctcgaca
aggaaaacaaaaatcctaattttttgtcagattgtgatgggttgaaaatg
gagatgataacaattttatttttggctactgtggtaatgggctgtttcca
atcccctccttccaatagaa

gaattcctaagaactgcttgaccataaagataaaaaagagtgcaaggaca
gaacagggctatcttggctgagccaacaccatctggcccagcacctccct
ctgcccgctgacctcctgactcagttcagagtcatatattagtcagatgt
tccactgacctagataagtgcccagccctcagacttcctgacaccctgat
ctatacgtacacttttactgatgtataactattctgttgaagtgtaaatt
gtccaatcgtgtgaaactgcgccaattccttccccagccccagacccttt
ctataaaaacctctagctttcgagcctcgagaccggcctcctgtgtgaga
tatgtgtaggtcgggagctccattattgaactacctcctgtgtgtgaatc
aagatggtctttcatgattctttggatgcccaccgaatcaggaattgagt
aggggtttccccactaggttctttaagctgcattatttctctgtttaatt
tttgtttaatgacttttttgtaaaagttgtatattgaagtctcccatttt
tagtgtaatgtcaatatatgttttgagctgtggtagtgaatattcttgac
gattgttaagagtttcaatgagccaggcagtggtggcacatgcctttaat
cccagcacttgggaggcagaggcaggcagatttctgagtttgaggccagc
ctggtctacagagtgagttccaggacagcgagggcaacacagagaaatcc
tgtctcctaaagaccaaaaccaaaactgtaaccaaaacaaaaagagtttc
agtggtcaaaattgttgatttctgccattttttcttttggtgtgtgtgtt
gtgtggtgttgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74190820_74191922
seq2: B6Ng01-221L16.b_48_1167 (reverse)

seq1  TTCTAT--GAAGGAGG---ATGGAAACAG-CCATTACAACAGTAG-CAAA  43
      ||||||  ||||||||    ||||||||| ||||||| ||||||| ||||
seq2  TTCTATTGGAAGGAGGGGATTGGAAACAGCCCATTACCACAGTAGCCAAA  50

seq1  AATAAAA-TGTTATCATCT-CATTTTCAA-CCATCACAATCTGACAAAAA  90
      ||||||| ||||||||||| ||||||||| ||||||||||||||||||||
seq2  AATAAAATTGTTATCATCTCCATTTTCAACCCATCACAATCTGACAAAAA  100

seq1  --TAGGA-TTTTGTTT--CCTGTCGAGCAATGAAAATGATGCCAAC-ACT  134
        ||||| ||||||||  | |||||||||||||||||||||||||| |||
seq2  ATTAGGATTTTTGTTTTCCTTGTCGAGCAATGAAAATGATGCCAACAACT  150

seq1  TAAAGTGTA-TGCAGACTGGGCTTGGGGTAGCTGTCACATGATGAAACAG  183
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGTATTGCAGACTGGGCTTGGGGTAGCTGTCACATGATGAAACAG  200

seq1  TATTATTGGGAACATTTCAACCTCAGGCTAGCCTGCTTTTAGGATGGCTT  233
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTGGGAACATTTCAACCTCAGGCTAGCCTGCTTTTAGGATGGCTT  250

seq1  TTCAGTGCAACC-AGACTAAAAGGATCAGAGTTCTGGGGCCTTGAAAAAA  282
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGCAACCAAGACTAAAAGGATCAGAGTTCTGGGGCCTTGAAAAAA  300

seq1  AAGAAAGAAATTTAACAGTGCAAAGCTTTGCATTCTGATCAGTTGAAATG  332
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAGAAAGAAATTTAACAGTGCAAAGC-TTGCATTCTGATCAGTTGAAATG  349

seq1  CATTGGTCCATTTGTCATTTGTGAGATAAGCCATGAGTGGTGTGGTTTTC  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTCCATTTGTCATTTGTGAGATAAGCCATGAGTGGTGTGGTTTTC  399

seq1  TGCAGCTAAAGTCTATTTGTGGGACAGGAAGGCACCATTAGAGACATGAA  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTAAAGTCTATTTGTGGGACAGGAAGGCACCATTAGAGACATGAA  449

seq1  CTCACAGTGCACCATACGACTACACCAGCAAGGGTCATATTTTGAGACAA  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGTGCACCATACGACTACACCAGCAAGGGTCATATTTTGAGACAA  499

seq1  TCCCAGTTTTTAAAAATTATAATGTTTGTTTGTAAGTTAATTTGTCTGTT  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTTTTTAAAAATTATAATGTTTGTTTGTAAGTTAATTTGTCTGTT  549

seq1  CCTAAAATACAATGACCTATAATGTATTTTATTCTGTGATTTTTTCCCCC  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATACAATGACCTATAATGTATTTTATTCTGTGATTTTTTCCCCC  599

seq1  CAAGAATCTGAAGAGATGGGAAAATAGCTACATGCATTCTCTCTATGTAG  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATCTGAAGAGATGGGAAAATAGCTACATGCATTCTCTCTATGTAG  649

seq1  AAAGGAAGCTGGCAGTTTTGAGAGAATGTTTCCTCCAAAAGAGGAAAGCA  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGCTGGCAGTTTTGAGAGAATGTTTCCTCCAAAAGAGGAAAGCA  699

seq1  GATGGGTGTTCACAGGGTGTATTCAGCACTGCCCTTTTCATCGTGAAGTT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTGTTCACAGGGTGTATTCAGCACTGCCCTTTTCATCGTGAAGTT  749

seq1  CTTGTATGTTAGTTTTTTTTCCTCCAAATAATTGAACTTGGATGATGTTT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATGTTAGTTTTTTTTCCTCCAAATAATTGAACTTGGATGATGTTT  799

seq1  TCCTGAAGTTGGATAACAGGCAAACTTTGAAGTGGCATTGGGAGGTAAAG  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGTTGGATAACAGGCAAACTTTGAAGTGGCATTGGGAGGTAAAG  849

seq1  GGAGAGAGACTAAGACTTTCACAGAGGCAAAGCGATAGGAGAGAATGAAG  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGACTAAGACTTTCACAGAGGCAAAGCGATAGGAGAGAATGAAG  899

seq1  GATGATCAGCTCCAGCTCAGGGATTTGAGGACCGGGATGAAGAGATTTGA  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCAGCTCCAGCTCAGGGATTTGAGGACCGGGATGAAGAGATTTGA  949

seq1  TTAGCTGGTTCAGGAAGAAAGAAATCGATAGGGAAGGTAAGCCATTTGAA  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGGTTCAGGAAGAAAGAAATCGATAGGGAAGGTAAGCCATTTGAA  999

seq1  ATCATGAATTGAGGGAAGCCCAGGATCAATCTGGCCTAGGAATTACTTTT  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAATTGAGGGAAGCCCAGGATCAATCTGGCCTAGGAATTACTTTT  1049

seq1  TCTAGGGCTCAGACATACTATTTTCAGTCAGATAGGCTTAGAAGAAAAAG  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGCTCAGACATACTATTTTCAGTCAGATAGGCTTAGAAGAAAAAG  1099

seq1  TATCAGGTCTGAAATGAATTC  1103
      |||||||||||||||||||||
seq2  TATCAGGTCTGAAATGAATTC  1120


seq1: chr6_74037986_74038760
seq2: B6Ng01-221L16.g_155_928

seq1  CACCTCCCTCTGCCCGCTGACCTCCTGACTCAGTTCAGAGTCATATATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCTCTGCCCGCTGACCTCCTGACTCAGTTCAGAGTCATATATTA  50

seq1  GTCAGATGTTCCACTGACCTAGATAAGTGCCCAGCCCTCAGACTTCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATGTTCCACTGACCTAGATAAGTGCCCAGCCCTCAGACTTCCTGA  100

seq1  CACCCTGATCTATACGTACACTTTTACTGATGTATAACTATTCTGTTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGATCTATACGTACACTTTTACTGATGTATAACTATTCTGTTGAA  150

seq1  GTGTAAATTGTCCAATCGTGTGAAACTGCGCCAATTCCTTCCCCAGCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAATTGTCCAATCGTGTGAAACTGCGCCAATTCCTTCCCCAGCCCC  200

seq1  AGACCCTTTCTATAAAAACCTCTAGCTTTCGAGCCTCGAGACCGGCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTTTCTATAAAAACCTCTAGCTTTCGAGCCTCGAGACCGGCCTCC  250

seq1  TGTGTGAGATATGTGTAGGTCGGGAGCTCCATTATTGAACTACCTCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAGATATGTGTAGGTCGGGAGCTCCATTATTGAACTACCTCCTGT  300

seq1  GTGTGAATCAAGATGGTCTTTCATGATTCTTTGGATGCCCACCGAATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAATCAAGATGGTCTTTCATGATTCTTTGGATGCCCACCGAATCAG  350

seq1  GAATTGAGTAGGGGTTTCCCCACTAGGTTCTTTAAGCTGCATTATTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAGTAGGGGTTTCCCCACTAGGTTCTTTAAGCTGCATTATTTCTC  400

seq1  TGTTTAATTTTTGTTTAATGACTTTTTTGTAAAAGTTGTATATTGAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATTTTTGTTTAATGACTTTTTTGTAAAAGTTGTATATTGAAGTC  450

seq1  TCCCATTTTTAGTGTAATGTCAATATATGTTTTGAGCTGTGGTAGTGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTTTAGTGTAATGTCAATATATGTTTTGAGCTGTGGTAGTGAAT  500

seq1  ATTCTTGACGATTGTTAAGAGTTTCAATGAGCCAGGCAGTGGTGGCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGACGATTGTTAAGAGTTTCAATGAGCCAGGCAGTGGTGGCACAT  550

seq1  GCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTT  600

seq1  GAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCGAGGGCAACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCGAGGGCAACACA  650

seq1  GAGAAATCCTGTCTCC-AAAGACCAAAACCAAAACTGTAACCAAAACAAA  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGAAATCCTGTCTCCTAAAGACCAAAACCAAAACTGTAACCAAAACAAA  700

seq1  AAGAGTTTCAGTGGTCAAAATTGTTGATTTCTGCCA-TTTTTCTTTTGGT  748
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAGAGTTTCAGTGGTCAAAATTGTTGATTTCTGCCATTTTTTCTTTTGGT  750

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTG  775
      |||||||| |||||| |||| ||||||
seq2  GTGTGTGT-TGTGTG-GTGT-TGTGTG  774


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