BAC Information

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BAC

Clone NameB6Ng01-221L17
Chromosome6 (Build37)
Map Location 74,425,304 - 74,426,253
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043338
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221L17.bB6Ng01-221L17.g
ACCGA036944GA036945
length966821
definitionB6Ng01-221L17.b B6Ng01-221L17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtaactaggttgttctcagtttatgagaagtgatttcctggct
atattatcttcaaagtttactggagatcatgaaagggaatctcatgtatt
tcagataatgggaggtcaaaggtgtggtcttacctgttgtacactgcagt
cctgaagtttattccccaaacaaaacaaaaacaagtcaacccacaaacta
agcactctatgagtgaatctgctatctttttactgtgctgtgaatatata
ggttttgtttgtttgtttgtttgtttgtttgtttattttttcagaaacaa
aactgaagggttttagtaggtttcaaagaatggaagtttttgaaaattgg
aaaaataaatatatagaagcaaaaaaaagaatggaagttttacataaatg
tgtttatgttttatggaaaataattttactcctggcaaatatgttatccc
agtaaaattagaatcaatctccatttgaagctatttctgccctccagtta
gcatttccaagtttcattttatttcctttgagggataaatatgttgagaa
catgctcagatgtctctttaatattaaagatgtagatatatcaagctgta
attcactaatcaattttgatcaattcagggatacttttctgagcatctat
cctcactaacctactaactttgcgttttgtcagacttgacactatagtaa
taattattctaattttcctaagggtttttaacgaaccttactgaacatca
aactcatttggagctatacatatttgttgtagattccatatatttgaaat
tattgatatctagcatctttattttgtagcaactctattttgaaaatgat
attcttgaacagcttttcgtgaaatttattatctctttgcaaataaatta
atgctcagatgtggacaacagataccaaaaaatgggtttcttcatgggtt
tatctcctacacaaca

gaattctttgtttagctctgtaccacatttgtaataggattatttggttc
tctggagtctaacttattgtgttctttgtatatattggatattagccctc
tattgggtttaggattggtaaagatcttttcccaatatgctggttaccgt
cttattgacggtctcttttgtgatacagaagctttaattttatgaggttc
catttgccaattcttgatcttacaacacaagcctttgatgatctgttcag
gaatttttttccctgtgcccatatgttctaggctcttccccactttctcc
tttctgtttcagtgtctctggttttatgtggaggtccttgatgcacttgt
acttgagctttgtacaaggagataagaatggatcaattcatgaatctcac
catgttttctttggttggtcccagggaaatcagggggtactggtcatggg
gcctatagggctgcaaaccccttcagctccttgggtactttttctagctg
cttcattggggaacttgggctccatccaatggatgactgtgagtatccac
ttctgtatttgttaggcattggcagagcctcaggagacagctatatcagg
ctcctctgtcaacaagctcttgttgcatccacaatagtgattggtgtttt
ttggttgtttatgggatggttcccctaagtgagccagtctctggaagttc
attatttcagtctctgctccaaactttgtcttctgtaactcctttccatg
ggtaattttgtccatggtaattttgttttcccttcctacggacttaccct
gcatatgttagcagaagatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74425304_74426253
seq2: B6Ng01-221L17.b_47_1012 (reverse)

seq1  TGTTGTGTAGGAGATGAACCCATGAAGAAACCATTTTTTTGGTATCTGTT  50
      ||||||||||||||| ||||||||||||||||  ||||||||||||||||
seq2  TGTTGTGTAGGAGATAAACCCATGAAGAAACCCATTTTTTGGTATCTGTT  50

seq1  GTCCACATCTGAGCA-TAATTTATTTGCATAGAGATAAT-AATTTCAC-A  97
      ||||||||||||||| ||||||||||||| ||||||||| |||||||| |
seq2  GTCCACATCTGAGCATTAATTTATTTGCAAAGAGATAATAAATTTCACGA  100

seq1  AAAGCTGTTCAAG-ATATCATTTTC-AAATAGAGTTGCTACAAA--TAAG  143
      ||||||||||||| ||||||||||| ||||||||||||||||||   |||
seq2  AAAGCTGTTCAAGAATATCATTTTCAAAATAGAGTTGCTACAAAATAAAG  150

seq1  ATGCTAGATATCAATAATT--CAATATATGGAATCTAC-ACAAATATGTA  190
      |||||||||||||||||||   |||||||||||||||| |||||||||||
seq2  ATGCTAGATATCAATAATTTCAAATATATGGAATCTACAACAAATATGTA  200

seq1  TAGCTCCAACTGAG-TTGATGTTCAGT-AGGTTCGTT-AAAACCCTTAGG  237
      ||||||||| |||| |||||||||||| ||||||||| ||||||||||||
seq2  TAGCTCCAAATGAGTTTGATGTTCAGTAAGGTTCGTTAAAAACCCTTAGG  250

seq1  -AAATTAGAATAATTATTACTATAGTGTCAAGTCTGAC-AAACGCAAAGT  285
       ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAATTAGAATAATTATTACTATAGTGTCAAGTCTGACAAAACGCAAAGT  300

seq1  TAGTAGGTTAGTGAGGATAGATGCTCAG-AAAGTATCCCTGAATTGATCA  334
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAGTAGGTTAGTGAGGATAGATGCTCAGAAAAGTATCCCTGAATTGATCA  350

seq1  AAATTGATTAGTGAATTACAGCTTGATATATCTACATCTTTAATATTAAA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATTAGTGAATTACAGCTTGATATATCTACATCTTTAATATTAAA  400

seq1  GAGACATCTGAGCATGTTCTCAACATATTTATCCCTCAAAGGAAATAAAA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATCTGAGCATGTTCTCAACATATTTATCCCTCAAAGGAAATAAAA  450

seq1  TGAAACTTGGAAATGCTAACTGGAGGGCAGAAATAGCTTCAAATGGAGAT  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTGGAAATGCTAACTGGAGGGCAGAAATAGCTTCAAATGGAGAT  500

seq1  TGATTCTAATTTTACTGGGATAACATATTTGCCAGGAGTAAAATTATTTT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTAATTTTACTGGGATAACATATTTGCCAGGAGTAAAATTATTTT  550

seq1  CCATAAAACATAAACACATTTATGTAAAACTTCCATTCTTTTTTTTGCTT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAACATAAACACATTTATGTAAAACTTCCATTCTTTTTTTTGCTT  600

seq1  CTATATATTTATTTTTCCAATTTTCAAAAACTTCCATTCTTTGAAACCTA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATTTATTTTTCCAATTTTCAAAAACTTCCATTCTTTGAAACCTA  650

seq1  CTAAAACCCTTCAGTTTTGTTTCTGAAAAAATAAACAAACAAACAAACAA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCCTTCAGTTTTGTTTCTGAAAAAATAAACAAACAAACAAACAA  700

seq1  ACAAACAAACAAAACCTATATATTCACAGCACAGTAAAAAGATAGCAGAT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAAACCTATATATTCACAGCACAGTAAAAAGATAGCAGAT  750

seq1  TCACTCATAGAGTGCTTAGTTTGTGGGTTGACTTGTTTTTGTTTTGTTTG  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCATAGAGTGCTTAGTTTGTGGGTTGACTTGTTTTTGTTTTGTTTG  800

seq1  GGGAATAAACTTCAGGACTGCAGTGTACAACAGGTAAGACCACACCTTTG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATAAACTTCAGGACTGCAGTGTACAACAGGTAAGACCACACCTTTG  850

seq1  ACCTCCCATTATCTGAAATACATGAGATTCCCTTTCATGATCTCCAGTAA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCATTATCTGAAATACATGAGATTCCCTTTCATGATCTCCAGTAA  900

seq1  ACTTTGAAGATAATATAGCCAGGAAATCACTTCTCATAAACTGAGAACAA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAAGATAATATAGCCAGGAAATCACTTCTCATAAACTGAGAACAA  950

seq1  CCTAGTTACAGAATTC  950
      ||||||||||||||||
seq2  CCTAGTTACAGAATTC  966


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