BAC Information

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BAC

Clone NameB6Ng01-221L21
Chromosome6 (Build37)
Map Location 124,509,938 - 124,510,505
singlet/doubletsinglet
Overlap genenone
Upstream geneEG546913, LOC100043516, EG435916, EG243628, EG545874, LOC384484, LOC623282, V2r1b, EG384486, Vmn2r-ps34, Vmn2r27, LOC623374, EG622297, Cd163, LOC100043530, 1700013D24Rik, 1700027F06Rik, 1700060L04Rik, Pex5, Clstn3, C1rl, C1r, C1s
Downstream geneLOC667277, EG317677, Mboat5, Emg1, Phb2, Ptpn6, Grcc10, Atn1, Eno2, Lrrc23, Spsb2, Tpi1, Usp5, Cdca3, Gnb3, Leprel2, Gpr162, Cd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221L21.g
ACCGA036950
length574
definitionB6Ng01-221L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatactcaccctttttattataccaaatcatcttttccttcaa
acatttccccccttaaatctgggaggctcgtccaaggcaaagtggaccaa
atggaagcatattaacaaaccaaacagtcagaaaccataatgaattcaca
gccctgaaaacaaataaaaacaaacaaaccaacaaacaaacagatacctt
ttctcaagacaaaacaaagctgaatggctggaaaccaaaatgcttttaaa
gcaaacaaagtaaaccttatgcatggttggaaagcatactctcaaaaaag
ggtaaccaacaagtttgatttaaaactttaagctctgaatagtcaacaga
ttgttcaactgagcaagggaagtcttgagttccattaagttctcttttaa
gaatctacccaatgagataatggttttatgtttggacataaagaatttat
tctggttcctgttccggtcatggttatggctcctgtgtgcagtggatcat
tccataactgctgatatataaatacatctctcacctctcagggaataaga
ttatactctattctggaaccaaat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_124509938_124510505
seq2: B6Ng01-221L21.g_35_608 (reverse)

seq1  ATTTGGTTCCAGAATAGAGTAT-CTCTTATTCCCTGTGAGGTGAGAGTTG  49
      ||||||||||||||||||||||  |||||||||||| |||||||||| ||
seq2  ATTTGGTTCCAGAATAGAGTATAATCTTATTCCCTGAGAGGTGAGAGATG  50

seq1  TATTTGTGTGTCTGCAGTTATGGAATGAACCACTGCACACTGGAGCCATC  99
      ||||| | | || ||||||||||||||| ||||||||||| |||||||| 
seq2  TATTTATATATCAGCAGTTATGGAATGATCCACTGCACACAGGAGCCATA  100

seq1  ACCCTGACCGGAGCAGGTACCAGCATAAGTTCTTTGTGTCCAAACCTGAA  149
      ||| |||||||| |||| ||||| |||| |||||| ||||||||| | ||
seq2  ACCATGACCGGAACAGGAACCAGAATAAATTCTTTATGTCCAAACATAAA  150

seq1  ACCATTATCTCCTTGGGTAGATTCTT-CGAGAGAACTTGCTGGAACTC-A  197
      ||||||||||| ||||||||||||||   |||||||||  |||||||| |
seq2  ACCATTATCTCATTGGGTAGATTCTTAAAAGAGAACTTAATGGAACTCAA  200

seq1  GACTTCCCTTGCTCAGTTG-ACAATCTGTTGTCTATTCTGAGCTTCTTGT  246
      ||||||||||||||||||| ||||||||||| |||||| ||||||   ||
seq2  GACTTCCCTTGCTCAGTTGAACAATCTGTTGACTATTCAGAGCTTAAAGT  250

seq1  TTTAAATCCTACTTGTTGGTTACCCTTTTTTGAGAGTATGCTTTCCAACC  296
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCAAACTTGTTGGTTACCCTTTTTTGAGAGTATGCTTTCCAACC  300

seq1  ATGCATAAGGTTTGCTTTGTTTGCTTTAAAAGCATTTTGGTTTCCAGCCA  346
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATGCATAAGGTTTACTTTGTTTGCTTTAAAAGCATTTTGGTTTCCAGCCA  350

seq1  TTCAGCTTTGTTTTGTCTTGAGAAAAGGTCTCTGTTTGTTTGTTGGTTTG  396
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCAGCTTTGTTTTGTCTTGAGAAAAGGTATCTGTTTGTTTGTTGGTTTG  400

seq1  TTTGTTTTTATTTGTTTTCAGGGCTCTGAATTCATTATGGTTTCTGACTG  446
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTGTTTTTATTTGTTTTCAGGGCTGTGAATTCATTATGGTTTCTGACTG  450

seq1  TTTGGTTTGTTAATTTGCTTCCATTTGGTCCACTTTGCCTTGGACGCGCC  496
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  TTTGGTTTGTTAATATGCTTCCATTTGGTCCACTTTGCCTTGGACGAGCC  500

seq1  TCCCAGATTTAAGGGGGGAAATGTTTGAAGGAAAAGATGATTTGGTTTAA  546
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCCCAGATTTAAGGGGGGAAATGTTTGAAGGAAAAGATGATTTGGTATAA  550

seq1  T--GCTCGATGAGTATGTGAATTC  568
      |      | |||||||||||||||
seq2  TAAAAAGGGTGAGTATGTGAATTC  574