BAC Information

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BAC

Clone NameB6Ng01-222G23
Chromosome6 (Build37)
Map Location 11,271,182 - 11,272,333
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040285, LOC667650, AA545190
Downstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879, Thsd7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222G23.bB6Ng01-222G23.g
ACCGA037451GA037452
length1,1501,176
definitionB6Ng01-222G23.b B6Ng01-222G23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaaagatttagagacagatatcaggtggtaaaattgctttgg
caactcagtgcttgtgggcctggatccaacgataataaaattattcagca
gagcaatctttaaagttactctaggcatttctacaattattttgttagat
acttggcattgcataaacaaagcaagagctaagagaagaacaattgtgga
tatgtgaactacatatattaaaaaaattcatggtgtttaagagatctagc
tagccaactagatttcaacctctttaggaatttcaataaatttaaaagaa
ttggagtaataatgaatatctttttcctcttaaataacttagaaatcagg
aagaatgagatatgtttgaaatgtccattgtaataaaaatatctaaaaaa
ctataactatgacaaatccaaaagtcaaaatgatcataagcaaaataaaa
attacattgagtctcatgataataacacaaactgtaaaaatatgctagtg
gtgaatgtaacagcttctaaggtctgttgtagcaaaaagtgaaagtaata
acaagagaaaaaaacccactagaaataaattttgaataatcctaatatta
taatgttataatatggaatctggtttccataaatgataaatatcttcata
ttataggattgtgaatatacttaatattataacgctacaatattaagttt
tgcttctaaaggtgattaatatcttcatattatagattaggagtacgcag
attatgtctcaaaggaaataattgggtaaatatttgaaattaatattata
tataccatattagagaattcatataattatcatatagtcataaaacattt
ataatagtccagctctcatttaacaccatttctgcaatcatggaatagaa
gaacaccttttcacacagataatcagctattccacttgaaagctacaact
gttctgcaatcattgatgggaaaactttcattcatgaaactgggaaggaa
tcaaagttttctctgtaactccttctatttagtatttcagaacgagttaa
gtcagaagaaaaaaagaaggagcaaatagaactagccagtgtcaaaaaca
taataatcatcttacttttagcaaattgaatataataacatgaaatattg


gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgcacaaccactctggaaatcagtctggccgttcctca
ggaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatatagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggtggccatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagagtgaagactgaagtgtggacactatgccccttgttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccatggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccggatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagatagagaaagaacccaagagctaaagggatctgcaaccct
attggttgaacacataatgtactaaccagtaccccgagctctgatctagc
tgcatattattaagatgtcctactgcatccactggaagagagtccactga
acgcaacttatatgccagtacaggcaacgtccaggcttaaacgggatgtc
cgtgcgctatagggtaaggtcgcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11271182_11272333
seq2: B6Ng01-222G23.b_44_1193

seq1  GAATTCCAGAAAGATTTAGAGACAGATATCAGGTGGTAAAATTGCTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAGATTTAGAGACAGATATCAGGTGGTAAAATTGCTTTGG  50

seq1  CAACTCAGTGCTTGTGGGCCTGGATCCAACGATAATAAAATTATTCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAGTGCTTGTGGGCCTGGATCCAACGATAATAAAATTATTCAGCA  100

seq1  GAGCAATCTTTAAAGTTACTCTAGGCATTTCTACAATTATTTTGTTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATCTTTAAAGTTACTCTAGGCATTTCTACAATTATTTTGTTAGAT  150

seq1  ACTTGGCATTGCATAAACAAAGCAAGAGCTAAGAGAAGAACAATTGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCATTGCATAAACAAAGCAAGAGCTAAGAGAAGAACAATTGTGGA  200

seq1  TATGTGAACTACATATATTAAAAAAATTCATGGTGTTTAAGAGATCTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAACTACATATATTAAAAAAATTCATGGTGTTTAAGAGATCTAGC  250

seq1  TAGCCAACTAGATTTCAACCTCTTTAGGAATTTCAATAAATTTAAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAACTAGATTTCAACCTCTTTAGGAATTTCAATAAATTTAAAAGAA  300

seq1  TTGGAGTAATAATGAATATCTTTTTCCTCTTAAATAACTTAGAAATCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTAATAATGAATATCTTTTTCCTCTTAAATAACTTAGAAATCAGG  350

seq1  AAGAATGAGATATGTTTGAAATGTCCATTGTAATAAAAATATCTAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAGATATGTTTGAAATGTCCATTGTAATAAAAATATCTAAAAAA  400

seq1  CTATAACTATGACAAATCCAAAAGTCAAAATGATCATAAGCAAAATAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACTATGACAAATCCAAAAGTCAAAATGATCATAAGCAAAATAAAA  450

seq1  ATTACATTGAGTCTCATGATAATAACACAAACTGTAAAAATATGCTAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTGAGTCTCATGATAATAACACAAACTGTAAAAATATGCTAGTG  500

seq1  GTGAATGTAACAGCTTCTAAGGTCTGTTGTAGCAAAAAGTGAAAGTAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGTAACAGCTTCTAAGGTCTGTTGTAGCAAAAAGTGAAAGTAATA  550

seq1  ACAAGAGAAAAAAACCCACTAGAAATAAATTTTGAATAATCCTAATATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGAAAAAAACCCACTAGAAATAAATTTTGAATAATCCTAATATTA  600

seq1  TAATGTTATAATATGGAATCTGGTTTCCATAAATGATAAATATCTTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTATAATATGGAATCTGGTTTCCATAAATGATAAATATCTTCATA  650

seq1  TTATAGGATTGTGAATATACTTAATATTATAACGCTACAATATTAAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGATTGTGAATATACTTAATATTATAACGCTACAATATTAAGTTT  700

seq1  TGCTTCTAAAGGTGATTAATATCTTCATATTATAGATTAGGAGTACGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTAAAGGTGATTAATATCTTCATATTATAGATTAGGAGTACGCAG  750

seq1  ATTATGTCTCAAAGGAAATAATTGGGTAAATATTTGAAATTAATATTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTCTCAAAGGAAATAATTGGGTAAATATTTGAAATTAATATTATA  800

seq1  TATACCATATTAGAGAATTCATATAATTATCATATAGTCATAAAACATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCATATTAGAGAATTCATATAATTATCATATAGTCATAAAACATTT  850

seq1  ATAATAGTCCAGCTCTCATTTAACACCATTTCTGCAATCATGGAATAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGTCCAGCTCTCATTTAACACCATTTCTGCAATCATGGAATAGAA  900

seq1  GAACACCTTTTCACACAGATAATCAGCTATTCCACTTGAAAGCTACAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCTTTTCACACAGATAATCAGCTATTCCACTTGAAAGCTACAACT  950

seq1  GTTCTGCAATCATTGATGGGAAAACTTTCATTCATGAAACTGGAAGGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||| | ||||
seq2  GTTCTGCAATCATTGATGGGAAAACTTTCATTCATGAAACTGGGAAGGAA  1000

seq1  TCAAAGTTTTCTCTGTAACTCCTTCTATTTAGTATTTCAGAAGGAGTTTA  1050
      |||||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  TCAAAGTTTTCTCTGTAACTCCTTCTATTTAGTATTTCAGAACGAG-TTA  1049

seq1  AGTCAGA--GAAAAAAGAAGGAGCAAATAGAACTAGCCAGTGTCAAAAAA  1098
      |||||||   |||||||||||||||||||||||||||||||||| |||||
seq2  AGTCAGAAGAAAAAAAGAAGGAGCAAATAGAACTAGCCAGTGTC-AAAAA  1098

seq1  CATAATAATCCATCTTTACTTTTAAGCAAAAATGATTATA--TACATGAA  1146
      ||||||||| |||| |||||||| ||| ||| ||| ||||   |||||||
seq2  CATAATAAT-CATC-TTACTTTT-AGC-AAATTGAATATAATAACATGAA  1144

seq1  ATATTG  1152
      ||||||
seq2  ATATTG  1150


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