BAC Information

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BAC

Clone NameB6Ng01-222O14
Chromosome6 (Build37)
Map Location 69,468,148 - 69,469,266
singlet/doubletsinglet
Overlap geneIgk
Upstream geneIgkv14-100, Igkv1-99, Igkv12-98, Igkv15-97, Igkv10-96, Igkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83, Igkv13-82, Gm460, Igkv13-80-1, Igkv4-80, Gm194, EG628498, Igkv4-78, EG667621, Igkv13-76, Igkv4-75, Igkv13-74-1, LOC236047, Igkv13-73-1, EG628516, Gm1499, Igkv13-71-1, Igkv4-71, Gm1502, EG628541, Gm1419, Igkv12-67, Igkv12-66, Igkv4-65, Igkv13-64, EG628571, Igkv13-62-1, EG636752, Igkv13-61-1, Igkv4-61, EG667683, Igkv4-60, Gm1077
Downstream geneIgkv13-57-2, Gm1418, Igkv13-57-1, Gm189, Igkv13-56-1, Igkv4-56, Igkv13-55-1, Gm1524, Igkv13-54-1, Igkv4-54, Gm1420, Igkv4-51, Gm1069, Igkv12-49, Igkv5-48, ENSMUSG00000029975, Igkv12-46, Igkv5-45, Igkv12-44, Igkv5-43, Igkv12-42, Igkv12-41, Igkv5-40-1, Igkv12-40, Gm1409, Igkv12-38, Gm1410, Igkv18-36, Igkv1-35, Igkv8-34, U29423, ENSMUSG00000053690, Igkv8-31, Igkv8-30, LOC545852, Igkv6-29, Igkv8-28, Igkv8-27, Igkv8-26, LOC667812, Igkv6-25, Igkv8-24, Igkv8-23-1, Igkv6-23, LOC667829, Igkv8-22, Igk-V8-21, EG667840, Igk-V19-20, Igk-V8-19, Igk-V8-18, LOC667863, Igk-V19-17, Igk-V8-16, Igk-V19-15, LOC667872, LOC620497, Igk-V19-14, LOC667889, Igk-V19-13, LOC667902, Igkv3-12-1, Igk-V21-12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222O14.bB6Ng01-222O14.g
ACCGA037798GA037799
length1,1091,180
definitionB6Ng01-222O14.b B6Ng01-222O14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccggatcattttagtgaacaaatcttagagacacaaggtcacac
taatgaggaacatatttaaggaagtttgaagaacaaaagtcacaaacaga
aaacctgagactttattcttcttttgaataaatgtcatagtctcatttga
acacaaatgaacccttgattaagtattataagttgcatagtgtagactgg
agcagaacctatataatacaaaccctgttaaatattatgtttatccaaat
agtttttgcatcaaagatcactcagagccagtaacaaaataatatatgtt
gtcaatattccaactcataaggcataccttccaccatgctttttactttg
agctaaatattcaaatgagttttgtttttaaatccgattttctaattttg
gctgttttttgtgcataactatttattgaacatattatataggcaagttt
tgagtattcctttaactaggtttcataagttaaggtttctttataaagaa
aagaaactgagctcattctgaaaagtttttgaatgtatttcaaacaaccc
attataacttcaatctaatattcccctcttggcaaaatgtatatctaata
ttaattttggaattgaatctttttggtgccttcttcttattcatatgaga
ctctagtacatgagcaggaataggtaatttcaaaaactcaagcagcagca
cttacagacaatgatctgcaactctgggaacactcctttaaaatcaagta
ggctttctcccaggaatgcagggatgattagatagatggaaaaccatcaa
cataatccactaaataaacaactcaagggaaaaaaaagaaaaacacagga
tcctctcattagatgtttagagcatttgagaaaattcaataccccttcat
ggaaaaagtcttggaaagatcaggagttcaagacccatacctgaatatag
ttaaaccagtcccaaaccagtaacaagcatcaactaaaggagaaatcttg
aagcaatcccatgaaatcagtctaaacatgctgaccacactctccctttc
tatcatgtagtatagattcgaaatcctagccagagccataagacaacaaa
ggaagtcaa
gaattctcacctgaggaataccaaatggcacagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtaagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaaaaaggacacatcctccactat
gttcatagcagccttatttataacagacagaagctagaaataaaccagat
gctcctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttgaaaatcctagccaaat
ggatggacctggagggcatcatcctgagtgaggtaacacaattacaaagg
aactcacacagtatatactcactgataagtggatattagcccaaaactta
ggatacccaagatataagatacaatttgctaaacaaatgaatctccagaa
gaatgaagactgaatgtggtcactatgcccctccttagaattgggaagaa
aacacccatggaaggagttacagagacaaagtttggagctttgacgaaag
gatggaccatctggagactgccatatccagggatccaccccataatcagc
ttccaaacgctgacaccattgcatacactagcaagattttgctgaaagga
cccagatatagctatctcttgtgagactatgcaaggggcctagcaaacac
agaagtggatgctcacagtcagctagtgatggatcacagggctcccaatg
gaggagcaagagaaagtactcacgagctaaagggatctgcaaccctatag
tggacacattatgactacagtactcagaagctctggactctagctgcata
tgtatcaaagatggcttagtcgcatcactgaagagaggcccaattggacc
gcactttatatgctcagtacacggtaaaaaaatggagcaatgcgtgggtt
aggacagcgacttatacgatcgcatgtcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_69468148_69469266
seq2: B6Ng01-222O14.b_46_1154

seq1  GAATTCCCGGATCATTTTAGTGAACAAATCTTAGAGACACAAGGTCACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGGATCATTTTAGTGAACAAATCTTAGAGACACAAGGTCACAC  50

seq1  TAATGAGGAACATATTTAAGGAAGTTTGAAGAACAAAAGTCACAAACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGGAACATATTTAAGGAAGTTTGAAGAACAAAAGTCACAAACAGA  100

seq1  AAACCTGAGACTTTATTCTTCTTTTGAATAAATGTCATAGTCTCATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGAGACTTTATTCTTCTTTTGAATAAATGTCATAGTCTCATTTGA  150

seq1  ACACAAATGAACCCTTGATTAAGTATTATAAGTTGCATAGTGTAGACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATGAACCCTTGATTAAGTATTATAAGTTGCATAGTGTAGACTGG  200

seq1  AGCAGAACCTATATAATACAAACCCTGTTAAATATTATGTTTATCCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACCTATATAATACAAACCCTGTTAAATATTATGTTTATCCAAAT  250

seq1  AGTTTTTGCATCAAAGATCACTCAGAGCCAGTAACAAAATAATATATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTGCATCAAAGATCACTCAGAGCCAGTAACAAAATAATATATGTT  300

seq1  GTCAATATTCCAACTCATAAGGCATACCTTCCACCATGCTTTTTACTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATATTCCAACTCATAAGGCATACCTTCCACCATGCTTTTTACTTTG  350

seq1  AGCTAAATATTCAAATGAGTTTTGTTTTTAAATCCGATTTTCTAATTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAATATTCAAATGAGTTTTGTTTTTAAATCCGATTTTCTAATTTTG  400

seq1  GCTGTTTTTTGTGCATAACTATTTATTGAACATATTATATAGGCAAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTTTGTGCATAACTATTTATTGAACATATTATATAGGCAAGTTT  450

seq1  TGAGTATTCCTTTAACTAGGTTTCATAAGTTAAGGTTTCTTTATAAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTCCTTTAACTAGGTTTCATAAGTTAAGGTTTCTTTATAAAGAA  500

seq1  AAGAAACTGAGCTCATTCTGAAAAGTTTTTGAATGTATTTCAAACAACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTGAGCTCATTCTGAAAAGTTTTTGAATGTATTTCAAACAACCC  550

seq1  ATTATAACTTCAATCTAATATTCCCCTCTTGGCAAAATGTATATCTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAACTTCAATCTAATATTCCCCTCTTGGCAAAATGTATATCTAATA  600

seq1  TTAATTTTGGAATTGAATCTTTTTGGTGCCTTCTTCTTATTCATATGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTGGAATTGAATCTTTTTGGTGCCTTCTTCTTATTCATATGAGA  650

seq1  CTCTAGTACATGAGCAGGAATAGGTAATTTCAAAAACTCAAGCAGCAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTACATGAGCAGGAATAGGTAATTTCAAAAACTCAAGCAGCAGCA  700

seq1  CTTACAGACAATGATCTGCAACTCTGGGAACACTCCTTTAAAATCAAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGACAATGATCTGCAACTCTGGGAACACTCCTTTAAAATCAAGTA  750

seq1  GGCTTTCTCCCAGGAATGCAGGGATGATTAGATAGATGGAAAACCATCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCTCCCAGGAATGCAGGGATGATTAGATAGATGGAAAACCATCAA  800

seq1  CATAATCCACTAAATAAACAACTCAAGGGAAAAAAAAGAAAAACACAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCCACTAAATAAACAACTCAAGGGAAAAAAAAGAAAAACACAGGA  850

seq1  TCCTCTCATTAGATGTTTAGAGCATTTGAGAAAATTCAATACCCCTTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCATTAGATGTTTAGAGCATTTGAGAAAATTCAATACCCCTTCAT  900

seq1  GGAAAAAGTCTTGGAAAGATCAGGAGTTCAAGACCCATACCTGAATATAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGTCTTGGAAAGATCAGGAGTTCAAGACCCATACCTGAATATAG  950

seq1  TTAAACCAGTCCCAAACCAGTAACAAGCATCAAACTAAAAGGAGAAAATC  1000
      ||||||||||||||||||||||||||||||| |||| ||||||| |||||
seq2  TTAAACCAGTCCCAAACCAGTAACAAGCATC-AACT-AAAGGAG-AAATC  997

seq1  TTGAAGCAATCCCATGAAAATCAAGGTCTAAACAATGCTGACCACACTCT  1050
      |||||||||||||||| ||||||  |||||||| ||||||||||||||||
seq2  TTGAAGCAATCCCATG-AAATCA--GTCTAAAC-ATGCTGACCACACTCT  1043

seq1  CCCTTTCTATTCAATGTAGTATAGATTCGAAATCCTAGCCAGAGCAATAA  1100
      ||||||||||   |||||||||||||||||||||||||||||||| ||||
seq2  CCCTTTCTAT--CATGTAGTATAGATTCGAAATCCTAGCCAGAGCCATAA  1091

seq1  GACAACAAAAGGAAGTCAA  1119
      |||||| ||||||||||||
seq2  GACAAC-AAAGGAAGTCAA  1109