BAC Information

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BAC

Clone NameB6Ng01-223D10
Chromosome6 (Build37)14 (Build37)
Map Location 10,804,382 - 10,805,298107,695,871 - 107,695,940
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC330264, LOC100040285
Downstream geneLOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223D10.bB6Ng01-223D10.g
ACCGA038021GA038022
length1,050657
definitionB6Ng01-223D10.b B6Ng01-223D10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(10,804,382 - 10,805,298)(107,695,871 - 107,695,940)
sequence
gaattcacaaattagttctgtatatagtttaatgatatgtttaaagattt
ctttgtataaggccatgttaaatgctcccatatgtataattattcttgct
cccattttccttcacttgatagcacatataacactatttctaatagtata
gtaggatatgttatttctgtattatttttgggagtggagctatagtatat
aattgttgggtatcatatcctttgtaggcttttcaggcagagctttttaa
aatttggatgctttcctttagtttttacatttagaagtggttttgtttga
agtttttataagtacacctgttgaaatcatcatgtttcttttccatcttt
ttctattaaaatgatagatcatgttatgatgttatatattcctaagggtt
gttagatctcaagaacaaacacttttagttataggatataatctgttttc
tgtatttagttattattatttaacagaggaacttgataataatgtttttt
tcttttgtaatgtggttttgtggttttgagaataggataatactgcctag
atacaatgagtgtaaaatatttcttttctcagatgggtttttgaaaataa
gaaagtaaggtcagatcagctgccattacttgtccatgtattatagcttg
catgtcacccagggggtctacagtaatcagggacacagcctgcctgcatc
cccagacatccacattaaccaggaacaaagaaggcctgctctaaaaaaga
cataagaggctcacctaaatcagagatagcactacttgcctacaaggaaa
ctggctctaacctaagtcacagagatctacaagcctccaaagaggctggc
tccaatcggagacacccaggcaagttaacatcagagattaccagatgggc
cagaggaaagcacaagatagtaaacaacagaaccaatgcaattcagcacc
acaggaaccagttctctcaacacagcaaggcctggattccccaacatgcc
tgaaaccaagatattgatcctaaaacccctctcatgagataatagagggc

gaattcccctctattggggcatataaagtttgtaatacaaaggggcctct
ccagtgatggccgactaggccatcttctgctacatatgcagctagagata
cgagttcgggggggggggggctactggttagttcatattgttgttccacc
tatagggttgcagaccccttcatcaacttgggtgctttctctagcttctc
cattgggggacactgtgttccatcttatagatgactgtgagcatatactt
ctgtatttgccaggcactggcatagcctcatatgagagagctataacagg
gtcacgtcagcaaaatctttctggcattgtgcaatagtgggtttggtggc
tgattatgggatggatccgtgggtggggtagaaaatgttcaacatcttta
attatcagtgaaatgcaaatcaaaacaaccctgagattccaccttacacc
agtcagaatggctaagatcaaaaattcaggtgacagcagatgctgggcga
ggatgtggagaaagagaaacactcctccactgctggtgggattgcaagct
tgtacaactactctggaagtcagtctggagtttcctcagaaaattggaca
taatactactggaagatccagcaataccttctcctgggcatatacccaag
aagttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10804382_10805298
seq2: B6Ng01-223D10.b_47_964 (reverse)

seq1  ATCTTGTGCTTTCCTCTGG-CCATCTGGTTATCTCTGATGTTAACTTGCC  49
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  ATCTTGTGCTTTCCTCTGGCCCATCTGGTAATCTCTGATGTTAACTTGCC  50

seq1  TGGGTGTCTCCGATTGGAGCCAGCCTCTTTGGAGGCTTGTAGATCTCTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTCTCCGATTGGAGCCAGCCTCTTTGGAGGCTTGTAGATCTCTGT  100

seq1  GACTTAGGTTAGAGCCAGTTTCCTTGTAGGCAAGTAGTGCTATCTCTGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGGTTAGAGCCAGTTTCCTTGTAGGCAAGTAGTGCTATCTCTGAT  150

seq1  TTAGGTGAGCCTCTTATGTCTTTTTTAGAGCAGGCCTTCTTTGTTCCTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTGAGCCTCTTATGTCTTTTTTAGAGCAGGCCTTCTTTGTTCCTGG  200

seq1  TTAATGTGGATGTCTGGGGATGCAGGCAGGCTGTGTCCCTGATTACTGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGGATGTCTGGGGATGCAGGCAGGCTGTGTCCCTGATTACTGTA  250

seq1  GACCCCCTGGGTGACATGCAAGCTATAATACATGGACAAGTAATGGCAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCCTGGGTGACATGCAAGCTATAATACATGGACAAGTAATGGCAGC  300

seq1  TGATCTGACCTTACTTTCTTATTTTCAAAAACCCATCTGAGAAAAGAAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGACCTTACTTTCTTATTTTCAAAAACCCATCTGAGAAAAGAAAT  350

seq1  ATTTTACACTCATTGTATCTAGGCAGTATTATCCTATTCTCAAAACCACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACACTCATTGTATCTAGGCAGTATTATCCTATTCTCAAAACCACA  400

seq1  AAACCACATTACAAAAGAAAAAAACATTATTATCAAGTTCCTCTGTTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACATTACAAAAGAAAAAAACATTATTATCAAGTTCCTCTGTTAAA  450

seq1  TAATAATAACTAAATACAGAAAACAGATTATATCCTATAACTAAAAGTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAACTAAATACAGAAAACAGATTATATCCTATAACTAAAAGTGT  500

seq1  TTGTTCTTGAGATCTAACAACCCTTAGGAATATATAACATCATAACATGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTGAGATCTAACAACCCTTAGGAATATATAACATCATAACATGA  550

seq1  TCTATCATTTTAATAGAAAAAGATGGAAAAGAAACATGATGATTTCAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCATTTTAATAGAAAAAGATGGAAAAGAAACATGATGATTTCAACA  600

seq1  GGTGTACTTATAAAAACTTCAAACAAAACCACTTCTAAATGTAAAAACTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTACTTATAAAAACTTCAAACAAAACCACTTCTAAATGTAAAAACTA  650

seq1  AAGGAAAGCATCCAAATTTTAAAAAGCTCTGCCTGAAAAGCCTACAAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGCATCCAAATTTTAAAAAGCTCTGCCTGAAAAGCCTACAAAGG  700

seq1  ATATGATACCCAACAATTATATACTATAGCTCCACTCCCAAAAATAATAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATACCCAACAATTATATACTATAGCTCCACTCCCAAAAATAATAC  750

seq1  AGAAATAACATATCCTACTATACTATTAGAAATAGTGTTATATGTGCTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAACATATCCTACTATACTATTAGAAATAGTGTTATATGTGCTAT  800

seq1  CAAGTGAAGGAAAATGGGAGCAAGAATAATTATACATATGGGAGCATTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAAGGAAAATGGGAGCAAGAATAATTATACATATGGGAGCATTTA  850

seq1  ACATGGCCTTATACAAAGAAATCTTTAAACATATCATTAAACTATATACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCCTTATACAAAGAAATCTTTAAACATATCATTAAACTATATACA  900

seq1  GAACTAATTTGTGAATTC  917
      ||||||||||||||||||
seq2  GAACTAATTTGTGAATTC  918

seq1: chr14_107695871_107695940
seq2: B6Ng01-223D10.g_652_720 (reverse)

seq1  GGAACTTCTTCTGGGTATATGCCCAGGAG-AGGTATTGCTGGATCTTCTG  49
      |||||||||  |||||||||||||||||| ||||||||||||||||||  
seq2  GGAACTTCT--TGGGTATATGCCCAGGAGAAGGTATTGCTGGATCTTCCA  48

seq1  GTAGTATTATGTCCAATTTTC  70
      |||||||||||||||||||||
seq2  GTAGTATTATGTCCAATTTTC  69