BAC Information

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BAC

Clone NameB6Ng01-223K05
Chromosome6 (Build37)
Map Location 20,786,308 - 20,786,971
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040838
Downstream geneKcnd2, LOC100041343, Tspan12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223K05.bB6Ng01-223K05.g
ACCGA038327GA038328
length6641,041
definitionB6Ng01-223K05.b B6Ng01-223K05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctgccctctacaatatcatctattttaggtaaccctaaact
tgtctaacaacagaaagaaaaaagatacataacaattaatttatatgttg
aataatttttctataacatcttaaatagtctctaatgtcatattcttcat
atatttgtagcaccttctttctgattaaagttttgttttctgatactttt
ctattttgaaatacataattttatttcattaggttaaaggactcatctgt
aatattgtaatcttatgcttattatcgtatacaaagccttagtaactagt
atctgtttaatattagcaatacaatccaccagttatttgtccttaaaacc
acgagaaatgatatcagtgatatagacagatgtttgtatttacaaaattg
taactatcaataagaatatgtgtttctggccttgtcaatatttctccttt
agggactcctagatgtttgtttgtacatcttcatactttcttgtgggaac
taaaaggggtcaggggaaggagggagagggaggatagcccatgtacatcc
agagttcctcctatgctctgggcaggcagatatgggaaggctgccagaag
ctttcaacttggccccaggtgggcatcaaagccaatgaccctacttgatg
gggggggtgggggg

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaatactgagat
tccacttcactccagtcagaatggctaagataaaaaactcaggtgacagc
agatgctggagaggatgtggagaaaggggaacattcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggagggtcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagaagccttgtttataatagccagaagctggaaagaacccagat
acccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatacagctataaaaaatgaatttatgaaattcctaggcaaatggatgg
acctggagggtattatcctgagtgaagtaacccaatcacacacactgata
agtggatattaatccagaaacttaggatacccatgatataagatacaact
tgccaaacgcatgaaattcaagaagaacgaagaccaaagtgtggacactt
taccctttcttagaaatgggaacaaaacacccatggaaggagttacagag
aatatatttggagctgtgacgaaaggatagacaatctagtgattgccata
tgcagggatccatcccataaatctgcttccaaatgctgacaccattgcat
acactagtaagattttgctgcaaggacccagatatagctgtctcttgtga
gactatgccggggcctagcaaacacagaagtggatgatcacagtcagcta
ttggatgggtcatacggcccccaatggaggagctagagaaatttacccaa
ggagctaaagggaactgcaaccctttaggtggaacaacaatatgaactac
cagtacccggggatctcctgtctttatgctggcatctgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_20786308_20786971
seq2: B6Ng01-223K05.b_46_709 (reverse)

seq1  CCCCCCACCCCCCCCATCAAGTAGGGTCATTGGCTTTGATGCCCACCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCCCCCCATCAAGTAGGGTCATTGGCTTTGATGCCCACCTGG  50

seq1  GGCCAAGTTGAAAGCTTCTGGCAGCCTTCCCATATCTGCCTGCCCAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGTTGAAAGCTTCTGGCAGCCTTCCCATATCTGCCTGCCCAGAGC  100

seq1  ATAGGAGGAACTCTGGATGTACATGGGCTATCCTCCCTCTCCCTCCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGGAACTCTGGATGTACATGGGCTATCCTCCCTCTCCCTCCTTCC  150

seq1  CCTGACCCCTTTTAGTTCCCACAAGAAAGTATGAAGATGTACAAACAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCCCTTTTAGTTCCCACAAGAAAGTATGAAGATGTACAAACAAAC  200

seq1  ATCTAGGAGTCCCTAAAGGAGAAATATTGACAAGGCCAGAAACACATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGAGTCCCTAAAGGAGAAATATTGACAAGGCCAGAAACACATATT  250

seq1  CTTATTGATAGTTACAATTTTGTAAATACAAACATCTGTCTATATCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGATAGTTACAATTTTGTAAATACAAACATCTGTCTATATCACTG  300

seq1  ATATCATTTCTCGTGGTTTTAAGGACAAATAACTGGTGGATTGTATTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTTCTCGTGGTTTTAAGGACAAATAACTGGTGGATTGTATTGCT  350

seq1  AATATTAAACAGATACTAGTTACTAAGGCTTTGTATACGATAATAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAAACAGATACTAGTTACTAAGGCTTTGTATACGATAATAAGCAT  400

seq1  AAGATTACAATATTACAGATGAGTCCTTTAACCTAATGAAATAAAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTACAATATTACAGATGAGTCCTTTAACCTAATGAAATAAAATTAT  450

seq1  GTATTTCAAAATAGAAAAGTATCAGAAAACAAAACTTTAATCAGAAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCAAAATAGAAAAGTATCAGAAAACAAAACTTTAATCAGAAAGAA  500

seq1  GGTGCTACAAATATATGAAGAATATGACATTAGAGACTATTTAAGATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTACAAATATATGAAGAATATGACATTAGAGACTATTTAAGATGTT  550

seq1  ATAGAAAAATTATTCAACATATAAATTAATTGTTATGTATCTTTTTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAATTATTCAACATATAAATTAATTGTTATGTATCTTTTTTCTT  600

seq1  TCTGTTGTTAGACAAGTTTAGGGTTACCTAAAATAGATGATATTGTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTTAGACAAGTTTAGGGTTACCTAAAATAGATGATATTGTAGAG  650

seq1  GGCAGAAAGAATTC  664
      ||||||||||||||
seq2  GGCAGAAAGAATTC  664


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