BAC Information

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BAC

Clone NameB6Ng01-223P18
Chromosome6 (Build37)
Map Location 36,618,926 - 36,619,990
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039327, 9330158H04Rik, Chrm2, EG620863, LOC100039370
Downstream genePtn, LOC100039514, Dgki, EG665024, Creb3l2, Akr1d1, LOC665046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223P18.bB6Ng01-223P18.g
ACCGA038577GA038578
length1,1991,077
definitionB6Ng01-223P18.b B6Ng01-223P18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaatgttgggatctattaatacaacactatt
gtcctgatctctgaattgggcctctccccctgagaagaaaagggggtcaa
aagtgggccaccagacgcacagctccaagaaagtcagcgccggatgtcct
gacctcaagatgtaccctgataccactaagttgctgctttcccttgtagt
cgccaaaagaaaaatttctgctgccccatccctcctgttgagaagtactt
cctctctttctgctgccccatccctcctgctgaggtgccttgggcctggc
taatacatttggggtcttgatacaacttcagaacggtttccgtgttgtta
ctcgtacaagaccctcgtctctctctaacccccatttggttattaggagg
aggtccccttgagatcctcaaataactggacctgctggacggggcaccta
aacataataaaagcaatatacagcaaaccagtagcaaacatcaaactaaa
tggagagaaacttgaagcaatcccactaaaatcagggtctagagaaggct
gcccactttctccgtacttattcaatatagtacttaaagtcctagccaga
gcaattcaacaacaaaaggagatcaaggggatacaaattggaaaggaaga
agtcaaaatatcaccatttgcagatgatatgatagtatatataagtgacc
ctaaaaattccactagagaactcctaaacctgataaacagcttcagtgca
gtagctggatataaaattaactcaaacaaatcaatggcctttctctacac
aaaggataaatgggctgagaaagtcattagggaaacaacacccttcacaa
tagtcacaaatactataaaataccttggcatgactctaagtaagtgaaat
atatatatgataagaacttcaagtctctgaagaaagaaattgaagatgat
ctcagaagatgggaaagatctcccatgcacatggtttggcaggattaata
tagtcaaaatgggtatactgccgaaagatctagagattcaatgcatcccc
catcaaatcactcatcttcactgagttagaacggcattgcaaattcatct
ggaataataaaaactaggaatagcaaacttatttctactaaaagacttta
attgaatcaccatgcttgaacctctcaagctggttaccttacagaagac
gaattccagagagccagtgaaggatggggaataggaggaaccattagaaa
gtcttggatactagggattccaggggctcctaggacccaaaggggataac
tttagccaaaatgcctaatagtggaaaatagaacctgaagaaactgctcc
cagtagataggcatggcccatcttgggatccaacccatctacagacacca
aaccccaacactattgctgatgccaagatgtgcttgcagacaggagcctg
gtatggctctcctctgagagactttgccagcaccagactaagacagatgc
agatattcacatccctctgtttgactctgcctcaccacaatgaccagcaa
gaatgttcattgctattacatgattctgttgccaggtaaactagaagtct
tactgaaattttcatccaattctaggtgacataatgaggagatgttagtg
gagagagcagattagctgtaccttttaatgcaacatagactaaaacagcc
aaaaatatcaccacaaaatatgtaaactagattctagcatgtgatacaaa
agccagaagaccactaaagtgagaagtggagaggattagaaacacaaacc
aagaaagagggggtggaaacaggattaacaagattatgactttatgatta
atacgtcagacactgaaaccttcatgatcatggacaaaaatggagaagta
tccattttaaaggggtgaattttgacaacgttgcttatattaaagagcag
catgtgggtaactggccccagtgtactgtacccagtgtatgtttgatgga
atattctttcttgcttaagtgaacctacatgagtgctgttattttgaacc
tggaaacctttatgtgaataccaaagtgctggaatggagggcagagtgtt
gggatatttgaattaaacacttgaatatctggattagccaaccatccaat
gttcaagccaaattcctttttccattttcaggtcttgggtttctacctta
ctccatagcttctccttatggaccctttgattattcttgggtagtacttt
aaaaagtccactatttggttccttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_36618926_36619990
seq2: B6Ng01-223P18.g_65_1141

seq1  GAATTCCAGAGAGCCAGTGAAGGATGGGGAATAGGAGGAACCATTAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGAGCCAGTGAAGGATGGGGAATAGGAGGAACCATTAGAAA  50

seq1  GTCTTGGATACTAGGGATTCCAGGGGCTCCTAGGACCCAAAGGGGATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGGATACTAGGGATTCCAGGGGCTCCTAGGACCCAAAGGGGATAAC  100

seq1  TTTAGCCAAAATGCCTAATAGTGGAAAATAGAACCTGAAGAAACTGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCAAAATGCCTAATAGTGGAAAATAGAACCTGAAGAAACTGCTCC  150

seq1  CAGTAGATAGGCATGGCCCATCTTGGGATCCAACCCATCTACAGACACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGATAGGCATGGCCCATCTTGGGATCCAACCCATCTACAGACACCA  200

seq1  AACCCCAACACTATTGCTGATGCCAAGATGTGCTTGCAGACAGGAGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAACACTATTGCTGATGCCAAGATGTGCTTGCAGACAGGAGCCTG  250

seq1  GTATGGCTCTCCTCTGAGAGACTTTGCCAGCACCAGACTAAGACAGATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGCTCTCCTCTGAGAGACTTTGCCAGCACCAGACTAAGACAGATGC  300

seq1  AGATATTCACATCCCTCTGTTTGACTCTGCCTCACCACAATGACCAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTCACATCCCTCTGTTTGACTCTGCCTCACCACAATGACCAGCAA  350

seq1  GAATGTTCATTGCTATTACATGATTCTGTTGCCAGGTAAACTAGAAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTCATTGCTATTACATGATTCTGTTGCCAGGTAAACTAGAAGTCT  400

seq1  TACTGAAATTTTCATCCAATTCTAGGTGACATAATGAGGAGATGTTAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAATTTTCATCCAATTCTAGGTGACATAATGAGGAGATGTTAGTG  450

seq1  GAGAGAGCAGATTAGCTGTACCTTTTAATGCAACATAGACTAAAACAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGCAGATTAGCTGTACCTTTTAATGCAACATAGACTAAAACAGCC  500

seq1  AAAAATATCACCACAAAATATGTAAACTAGATTCTAGCATGTGATACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATCACCACAAAATATGTAAACTAGATTCTAGCATGTGATACAAA  550

seq1  AGCCAGAAGACCACTAAAGTGAGAAGTGGAGAGGATTAGAAACACAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAGACCACTAAAGTGAGAAGTGGAGAGGATTAGAAACACAAACC  600

seq1  AAGAAAGAGGGGGTGGAAACAGGATTAACAAGATTATGACTTTATGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGGGGGTGGAAACAGGATTAACAAGATTATGACTTTATGATTA  650

seq1  ATACGTCAGACACTGAAACCTTCATGATCATGGACAAAAATGGAGAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTCAGACACTGAAACCTTCATGATCATGGACAAAAATGGAGAAGTA  700

seq1  TCCATTTTAAAGGGGTGAATTTTGACAACGTTGCTTATATTAAAGAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTAAAGGGGTGAATTTTGACAACGTTGCTTATATTAAAGAGCAG  750

seq1  CATGTGGGTAACTGGCCCCAGTGTACTGTACCCAGTGTATGTTTGATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGTAACTGGCCCCAGTGTACTGTACCCAGTGTATGTTTGATGGA  800

seq1  ATATTCTTTCTTGCTTAAGTGAACCTACATGAGTGCTGTTATTTTGAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTTCTTGCTTAAGTGAACCTACATGAGTGCTGTTATTTTGAACC  850

seq1  TGGAAACCTTTATGTGAATA-CAAAGTGCTGGAATGGAGGGCAGAGTGTT  899
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGGAAACCTTTATGTGAATACCAAAGTGCTGGAATGGAGGGCAGAGTGTT  900

seq1  GGGATATTTGAATTAAACACTTGAATATCTGAATTAGCCAACCAT-CAAT  948
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  GGGATATTTGAATTAAACACTTGAATATCTGGATTAGCCAACCATCCAAT  950

seq1  GTTCAAGCCAAA-TCCTTTTTCCA-TTTCA-GTCTT-GGTTTCTACCTTA  994
      |||||||||||| ||||||||||| ||||| ||||| |||||||||||||
seq2  GTTCAAGCCAAATTCCTTTTTCCATTTTCAGGTCTTGGGTTTCTACCTTA  1000

seq1  CTCCATAGCTTCT-CTTATG--ACCTTGAATTATTCTT-GGTAGTACTTT  1040
      ||||||||||||| ||||||   ||||  ||||||||| |||||||||||
seq2  CTCCATAGCTTCTCCTTATGGACCCTTTGATTATTCTTGGGTAGTACTTT  1050

seq1  AAAAGTCCCACTATTTG--TTCTTATT  1065
      ||||   ||||||||||  | ||||||
seq2  AAAAAGTCCACTATTTGGTTCCTTATT  1077