BAC Information

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BAC

Clone NameB6Ng01-224H18
Chromosome6 (Build37)
Map Location 64,104,045 - 64,104,936
singlet/doubletsinglet
Overlap geneGrid2
Upstream geneLOC667099
Downstream geneAtoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224H18.bB6Ng01-224H18.g
ACCGA038930GA038931
length963181
definitionB6Ng01-224H18.b B6Ng01-224H18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctaaattgtcacccactatactgtctttggagggctggttgg
cctgcttgccgagtgtgaagaacagcccaggagatgcaaattcttcttct
gtttgcctatgattgcacaagaaagctaagactgttgcgacttagccatg
tcttaggtttttatatgattgtctaagaaagttaaggctgggagactgag
ccttctcttaggtttcatgctgtcagctttacttcaaacagtttaaaatg
cctttagatatttaaaactgaaactgaaattaaccaagtatttagtctgc
ttttcccttatatgtcttttattaatttttattaattctttaatgatttt
gtgtatacatacagtgaattttgatcacattcgccctccactcctttcct
tttttttatcttatttctttttttttttaatttttattacatatttgtta
ttcgacgcgttctcacgaccggccaggaagaacacaacaaccagaatctt
ctacggcaaagctttattgcttacatcttatggggccagagtgtaagaag
caagagagagagaaaacgaaacccctttcctctttaaagagaacaacaat
tgcctaggacgcatcactccctgattggctgcagcccatggccgagctga
cgttcacgggaaaaacagagtacaagtagtcgtaaatacccttggctcat
gcgcagactatttgtttaccaacttagaacacaggatgtcagcgccatct
tgtgacggcgaatgtgggggcggcttcccacagttcccccttttctatta
ataagagcaaataggccacccatattaatgagagtggagatagaggtcaa
atccccagtgtgtaggtaaaggaaccatgtacaggattagctcttaggct
caacaggcttttacccagagcaaccctgacctgctcccgtgtcgttttgc
ctgggggaaggga

tcacctgaggattacggaatggctgagaagcacctgaaaaaaaaaatggc
tttgttgggagaggaagcgcctagcctctcagagacttgaagtcccaggg
tgaggtgatacccagggtgggttcgccccagctgagagaagacagggaga
gggggaggagggaatgactgaggaggggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_64104045_64104936
seq2: B6Ng01-224H18.b_47_938

seq1  GAATTCACCTAAATTGTCACCCACTATACTGTCTTTGGAGGGCTGGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTAAATTGTCACCCACTATACTGTCTTTGGAGGGCTGGTTGG  50

seq1  CCTGCTTGCCGAGTGTGAAGAACAGCCCAGGAGATGCAAATTCTTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTGCCGAGTGTGAAGAACAGCCCAGGAGATGCAAATTCTTCTTCT  100

seq1  GTTTGCCTATGATTGCACAAGAAAGCTAAGACTGTTGCGACTTAGCCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCTATGATTGCACAAGAAAGCTAAGACTGTTGCGACTTAGCCATG  150

seq1  TCTTAGGTTTTTATATGATTGTCTAAGAAAGTTAAGGCTGGGAGACTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGTTTTTATATGATTGTCTAAGAAAGTTAAGGCTGGGAGACTGAG  200

seq1  CCTTCTCTTAGGTTTCATGCTGTCAGCTTTACTTCAAACAGTTTAAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTTAGGTTTCATGCTGTCAGCTTTACTTCAAACAGTTTAAAATG  250

seq1  CCTTTAGATATTTAAAACTGAAACTGAAATTAACCAAGTATTTAGTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGATATTTAAAACTGAAACTGAAATTAACCAAGTATTTAGTCTGC  300

seq1  TTTTCCCTTATATGTCTTTTATTAATTTTTATTAATTCTTTAATGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTTATATGTCTTTTATTAATTTTTATTAATTCTTTAATGATTTT  350

seq1  GTGTATACATACAGTGAATTTTGATCACATTCGCCCTCCACTCCTTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATACATACAGTGAATTTTGATCACATTCGCCCTCCACTCCTTTCCT  400

seq1  TTTTTTTATCTTATTTCTTTTTTTTTTTAATTTTTATTACATATTTGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATCTTATTTCTTTTTTTTTTTAATTTTTATTACATATTTGTTA  450

seq1  TTCGACGCGTTCTCACGACCGGCCAGGAAGAACACAACAACCAGAATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGACGCGTTCTCACGACCGGCCAGGAAGAACACAACAACCAGAATCTT  500

seq1  CTACGGCAAAGCTTTATTGCTTACATCTTATGGGGCCAGAGTGTAAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGGCAAAGCTTTATTGCTTACATCTTATGGGGCCAGAGTGTAAGAAG  550

seq1  CAAGAGAGAGAGAAAACGAAACCCCTTTCCTCTTTAAAGAGAACAACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGAGAGAAAACGAAACCCCTTTCCTCTTTAAAGAGAACAACAAT  600

seq1  TGCCTAGGACGCATCACTCCCTGATTGGCTGCAGCCCATGGCCGAGCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGGACGCATCACTCCCTGATTGGCTGCAGCCCATGGCCGAGCTGA  650

seq1  CGTTCACGGGAAAAACAGAGTACAAGTAGTCGTAAATACCCTTGGCTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCACGGGAAAAACAGAGTACAAGTAGTCGTAAATACCCTTGGCTCAT  700

seq1  GCGCAGACTATTTGTTTACCAACTTAGAACACAGGATGTCAGCGCCATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAGACTATTTGTTTACCAACTTAGAACACAGGATGTCAGCGCCATCT  750

seq1  TGTGACGGCGAATGTGGGGGCGGCTTCCCACAGTTCCCCCTTTTCTATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACGGCGAATGTGGGGGCGGCTTCCCACAGTTCCCCCTTTTCTATTA  800

seq1  ATAAGAGCAAATAGGCCACCCATATTAATGAGAGTGGAGATAGAGGTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGCAAATAGGCCACCCATATTAATGAGAGTGGAGATAGAGGTCAA  850

seq1  ATCCCCAGTGTGTAGGTAAAGGAACCATGTACAGGATTAGCT  892
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGTGTGTAGGTAAAGGAACCATGTACAGGATTAGCT  892


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