BAC Information

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BAC

Clone NameB6Ng01-224I14
Chromosome6 (Build37)
Map Location 103,022,223 - 103,023,128
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666084, Cntn3, EG666123
Downstream geneChl1, LOC666141, LOC100043345
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224I14.bB6Ng01-224I14.g
ACCGA038967GA038968
length763906
definitionB6Ng01-224I14.b B6Ng01-224I14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatgacaaaggggtgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tcaacctcataccaatcagaatggctaagatcaaaaattcaggtgacaga
agatgctggagaggttgttgataaagaggaacactcctccatttctggtg
ggaatgcaagatggtacaaccactctggaagtcagtctggtggttcctta
gaaaattggacatagtactactggaagatccagcaatacctctcctgagc
atatacccgggagatgttccaacttgcaataaggatacatgttccactat
gttcatagcagccttatttataatagccagaagctggaaagaactcagat
gtccctcaacagaggaatggatacagaaaacgtggtacatttacacaatg
gagtactactcagctattaaaaacaatgaattcatgaaattcttaggcaa
agggatggatctggaggatatcatcctgagtgaggtaacccaatcaccaa
agacacacatgatatgcactcactgacaagtggatataagcccaaaaatt
ttagaataccccatgatacaatttgaaaaacacatgaaactgaagaagaa
ggaagaccaaagtgtggatactttcattccttcttagaatggggaaacaa
aatacacatggaaaggggttacagaaacaaaagcttggagctgagacgga
tgggaaggacctt
gaattcaaaatccatttgctgcagctgaaagaggaataaaaggcaaaggt
actgtggatatacagaaagccaaagaaataaaacgatagaaagacctttt
ccaggatatcacaatttgcagattcctttttttttttttttttttttttt
ttttttttttttttgggaccttaccctgaacccactgggaccctttaaat
tgagacacaaatgactggaatgattttacaactcagtggaaataaaatat
gaggacaaaaaaacatattccccgcttaatccaaaaagagaaacttccat
caagggtgtatgcattctgattttattattcccctgtccttcttaggaaa
ccgtcctaatgccccacggaaaccttggaagggcagcaaacacctccaga
gtaacaaccccagggttttttgtttggtttttttttttttcccattcttc
ccttccaaattgtcttgttgtaccatttgatatacaaaaagctttcccac
agcccgtccggatatgtcaggagtgtccagtcactgttacagcaaaacta
aaattaccttcttataaggacagttggcttggtttgatgtagatcccggt
catttgctgcgggtgctatggacttaaagcagcacatcatggtgggcagc
acatgacccatgagggtatgtttacatgttaagagtaggggagaacctct
gttccacctctttaagggtctgctgtctcctagtgccacaggctggggat
cagttttttacttcaaaggcctgggagatattagagccaaactggcaagt
tctcctttgctctttaatatagactttatatggctccttagacattttta
tggtttgacaatatctgacagaaaatgccgaaagcaatttcccttcttct
tcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_103022223_103023128
seq2: B6Ng01-224I14.g_68_973 (reverse)

seq1  AGAA-AAGAAGAA---AAATATGCTTTCTGCATTTTTCTTTGTCAGATAT  46
      |||| ||||||||   |||| ||||||| ||||||   | ||||||||| 
seq2  AGAAGAAGAAGAAGGGAAAT-TGCTTTCGGCATTT---TCTGTCAGATA-  45

seq1  TTTGTCAAAACATAAAAATGTCTAAGAGGCCATATAAAGTCTATTATTAA  96
       |||||||| ||||||||||||||||  ||||||||||||||||  | ||
seq2  -TTGTCAAACCATAAAAATGTCTAAGGAGCCATATAAAGTCTATATTAAA  94

seq1  GAGCAAA-GAGAACTTGCCAAGTTTGGCTCCTAATATCTCCCAGGCCTTT  145
      ||||||| ||||||||||| ||||||||| ||||||||||||||||||||
seq2  GAGCAAAGGAGAACTTGCC-AGTTTGGCT-CTAATATCTCCCAGGCCTTT  142

seq1  GAGTTAAAAACTTGAT-CCCAGCCTGTGGCACTAGGAGACAGCAGAACCT  194
      ||  ||||||  |||| ||||||||||||||||||||||||||||| |||
seq2  GAAGTAAAAAACTGATCCCCAGCCTGTGGCACTAGGAGACAGCAGACCCT  192

seq1  TAAAGAGTTGGAACAGAGGTTCT-CCCTACTCTTAACATGTAAACATAGC  243
      ||||||| ||||||||||||||| |||||||||||||||||||||||| |
seq2  TAAAGAGGTGGAACAGAGGTTCTCCCCTACTCTTAACATGTAAACATACC  242

seq1  CTCATGGGTCATGTGCTG-CCACCATGATGTGCTGCTTTAAGTCCATAGC  292
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTCATGGGTCATGTGCTGCCCACCATGATGTGCTGCTTTAAGTCCATAGC  292

seq1  ACCCGCAGCAAATGACCAGGATCTACATCAAAACAAGCCAACTGTCCTTA  342
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  ACCCGCAGCAAATGACCGGGATCTACATCAAACCAAGCCAACTGTCCTTA  342

seq1  TAAGAAGGTAATTTTAGTTTTGCTGTAACAGTGACTGGACACTCCTGACA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGGTAATTTTAGTTTTGCTGTAACAGTGACTGGACACTCCTGACA  392

seq1  TATCCGGACTGGCTGTTGGAAAGCATCTTGTATATCAAATGGTACAACAA  442
      ||||||||| |||||| ||||||| | |||||||||||||||||||||||
seq2  TATCCGGACGGGCTGTGGGAAAGCTTTTTGTATATCAAATGGTACAACAA  442

seq1  GACAATCTAGAAAGGAAGAATAGGAAAAAAAAAAAAAACAAACAAAAAAA  492
      |||||| | ||| |||||||| ||||||||||||||| ||||||||||| 
seq2  GACAATTTGGAAGGGAAGAATGGGAAAAAAAAAAAAACCAAACAAAAAAC  492

seq1  CCTCGGGTTGTTACTCTGGATGTGTTTGCTGCCCTTCCAAGGTCTCCGTC  542
      ||| |||||||||||||||| |||||||||||||||||||||| ||||| 
seq2  CCTGGGGTTGTTACTCTGGAGGTGTTTGCTGCCCTTCCAAGGTTTCCGTG  542

seq1  GGGCATTAGGACGGTTTCCTAAGAAGGACATGGGAATAATAAAATCAGAA  592
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGGCATTAGGACGGTTTCCTAAGAAGGACAGGGGAATAATAAAATCAGAA  592

seq1  TGCATACAGCCTTGATGGAAGCTTCTCTCTCTGGATTAAGCTGGGAATAT  642
      |||||||| |||||||||||| |||||| | |||||||||| ||||||||
seq2  TGCATACACCCTTGATGGAAGTTTCTCTTTTTGGATTAAGCGGGGAATAT  642

seq1  GTTCTTTTGTCCTCATATTTTATTTCCACTGAGTTGTAAAATCATTCCAG  692
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTGTCCTCATATTTTATTTCCACTGAGTTGTAAAATCATTCCAG  692

seq1  TCATTTGTGTCTCAATTTAAAGGGTCACAGTAGGTTCAGGGTAAGGTCAC  742
      |||||||||||||||||||||||||| |||| |||||||||||||||| |
seq2  TCATTTGTGTCTCAATTTAAAGGGTCCCAGTGGGTTCAGGGTAAGGTCCC  742

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAATCTGCAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAATCTGCAAA  792

seq1  TTGTGATATCCTGGAAAAGGTCTTTCTATCGTTTTATTTCTTTGGCTTTC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATATCCTGGAAAAGGTCTTTCTATCGTTTTATTTCTTTGGCTTTC  842

seq1  TGTATATCCACAGTACCTTTGCCTTTTATTCCTCTTTCAGCTGCAGCAAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATCCACAGTACCTTTGCCTTTTATTCCTCTTTCAGCTGCAGCAAA  892

seq1  TGGATTTTGAATTC  906
      ||||||||||||||
seq2  TGGATTTTGAATTC  906