BAC Information

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BAC

Clone NameB6Ng01-228H21
Chromosome6 (Build37)
Map Location 56,386,034 - 56,387,096
singlet/doubletsinglet
Overlap genenone
Upstream geneAdcyap1r1, LOC100042219, Neurod6, LOC100041339, Ccdc129, Gsbs, LOC100041357, Pde1c
Downstream geneEG666688, Lsm5, 5830411G16Rik, LOC100042288, Kbtbd2, Fkbp9, Nt5c3, LOC100042327, V1rc21, V1rc19, V1rc20, EG434016, V1rc32, V1rc30, V1rc1, V1rc3, EG626397, V1rc4, V1rc5, V1rc7, V1rc6, LOC100041445, V1r-ps6, V1rc29, V1rc16, V1rc26, V1rc27, EG434017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228H21.g
ACCGA041892
length1,079
definitionB6Ng01-228H21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaacacagtttaaggttaaattgaccctttataccaaagctta
ttcttctgttcctgggtcctgaggatctgagccctgtaggtgctatatga
gtaagacatggcattgacccaacattgtgagcagccctgaagctaccctg
tgtatcagtcatctcagttgcttaccttgaactctgtgtctcctagggtg
ggtggagtcctcaggtttggatagctttgcttttggaagaggaagacaat
actccccaaagtcaccacaggcttgataaccttctctcacttagagtgtc
tgtatttgggttctggcatttatttcctagattctatacataggaaatta
ggcatatgttctcaagagcagagccccatggagccaacccttcagtctga
gagaagtgtaaggtcttgttagatgccattggatggctctgttttccatt
ccatattaaattattgaacccctcattttggcatctggcagtcatttttc
taccagggacccctgccaagaactcaatttctgacttgattacttttagg
aagtattcagtgtagttgatggtgggcgtggcatgtggctgaatccctag
gggttccagccccacccccaatgagtcatgggttagtgtgcccagttagt
tagagggaagtctggctgcgcagatttatcatcatgtgtggctacctata
tgaacatttactttcccaatttagtgttgccttcagggaatttctgtgtt
tctctatggtctttgataatcctcaagtttaccaagagggaatgtaaagg
gaaggatttgaggattttaaacatttttattcatctataacatttttctt
gggttaaaagttgatgagttttaattatgacttctttgcatgtgtatcat
ttctttaatctcattttgttctccctcttctgtcatccctctttaagctg
ggttcctttccttcaaccaattaactttcttcctcctgctttccagttaa
tgtaattaacactgccctctccttccttaagaagctaacttttcagcttc
ttgtaacctgtattttggcacacatcaca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_56386034_56387096
seq2: B6Ng01-228H21.g_68_1146 (reverse)

seq1  TGTG-TGTGTGC--ACATACAGGTTAC-AGAAGCTGAAAGGT--GGCTCT  44
      |||| |||||||  | ||||||||||| ||||||||||| ||  |  |||
seq2  TGTGATGTGTGCCAAAATACAGGTTACAAGAAGCTGAAAAGTTAGCTTCT  50

seq1  TAAGGGAGGAGAGGGCAGTGT--AATACATTAACTGG-AAGCAGAAGGAG  91
      ||||| |||||||||||||||  | |||||||||||| |||||| |||| 
seq2  TAAGGAAGGAGAGGGCAGTGTTAATTACATTAACTGGAAAGCAGGAGGAA  100

seq1  GAA--GTAATTGGTGGAAGAAAAGGAA-CCAGCTAAAAGAGGGATGACAG  138
      |||   |||||||| |||| ||||||| |||||| |||||||||||||||
seq2  GAAAGTTAATTGGTTGAAGGAAAGGAACCCAGCTTAAAGAGGGATGACAG  150

seq1  AAGAGGGAGAACAAAATGAGATTAAAGAAATGATACACATGCAAAGAAGT  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAGAACAAAATGAGATTAAAGAAATGATACACATGCAAAGAAGT  200

seq1  CATAA-TGAAACTCATCA--CTTTGACCCAAG-AAAATGTTATAGATGAA  234
      ||||| | ||||||||||   ||| ||||||| |||||||||||||||||
seq2  CATAATTAAAACTCATCAACTTTTAACCCAAGAAAAATGTTATAGATGAA  250

seq1  TAAAAATGTTTTAAAATCCTCAAATCCTT-CCTTTACATTCCCTCTTGGT  283
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  TAAAAATG-TTTAAAATCCTCAAATCCTTCCCTTTACATTCCCTCTTGGT  299

seq1  AAACTTGAGGATTATCAAAGACCATAGAGAAACACAGAAATTCCCTGAAG  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAGGATTATCAAAGACCATAGAGAAACACAGAAATTCCCTGAAG  349

seq1  GCAACACTAAATTGGGAAAGTAAATGTTCATATAGGTAGCCACACATGAT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACTAAATTGGGAAAGTAAATGTTCATATAGGTAGCCACACATGAT  399

seq1  GATAAATCTGCGCAGCCAGACTTCCCTCTAACTAACTGGGCACACTAACC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATCTGCGCAGCCAGACTTCCCTCTAACTAACTGGGCACACTAACC  449

seq1  CATGACTCATTGGGGGTGGGGCTGGAACCCCTAGGGATTCAGCCACATGC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTCATTGGGGGTGGGGCTGGAACCCCTAGGGATTCAGCCACATGC  499

seq1  CACGCCCACCATCAACTACACTGAATACTTCCTAAAAGTAATCAAGTCAG  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCCACCATCAACTACACTGAATACTTCCTAAAAGTAATCAAGTCAG  549

seq1  AAATTGAGTTCTTGGCAGGGGTCCCTGGTAGAAAAATGACTGCCAGATGC  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAGTTCTTGGCAGGGGTCCCTGGTAGAAAAATGACTGCCAGATGC  599

seq1  CAAAATGAGGGGTTCAATAATTTAATATGGAATGGAAAACAGAGCCATCC  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAGGGGTTCAATAATTTAATATGGAATGGAAAACAGAGCCATCC  649

seq1  AATGGCATCTAACAAGACCTTACACTTCTCTCAGACTGAAGGGTTGGCTC  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCATCTAACAAGACCTTACACTTCTCTCAGACTGAAGGGTTGGCTC  699

seq1  CATGGGGCTCTGCTCTTGAGAACATATGCCTAATTTCCTATGTATAGAAT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGCTCTGCTCTTGAGAACATATGCCTAATTTCCTATGTATAGAAT  749

seq1  CTAGGAAATAAATGCCAGAACCCAAATACAGACACTCTAAGTGAGAGAAG  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAATAAATGCCAGAACCCAAATACAGACACTCTAAGTGAGAGAAG  799

seq1  GTTATCAAGCCTGTGGTGACTTTGGGGAGTATTGTCTTCCTCTTCCAAAA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCAAGCCTGTGGTGACTTTGGGGAGTATTGTCTTCCTCTTCCAAAA  849

seq1  GCAAAGCTATCCAAACCTGAGGACTCCACCCACCCTAGGAGACACAGAGT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCTATCCAAACCTGAGGACTCCACCCACCCTAGGAGACACAGAGT  899

seq1  TCAAGGTAAGCAACTGAGATGACTGATACACAGGGTAGCTTCAGGGCTGC  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTAAGCAACTGAGATGACTGATACACAGGGTAGCTTCAGGGCTGC  949

seq1  TCACAATGTTGGGTCAATGCCATGTCTTACTCATATAGCACCTACAGGGC  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATGTTGGGTCAATGCCATGTCTTACTCATATAGCACCTACAGGGC  999

seq1  TCAGATCCTCAGGACCCAGGAACAGAAGAATAAGCTTTGGTATAAAGGGT  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCCTCAGGACCCAGGAACAGAAGAATAAGCTTTGGTATAAAGGGT  1049

seq1  CAATTTAACCTTAAACTGTGTTTGGAATTC  1063
      ||||||||||||||||||||||||||||||
seq2  CAATTTAACCTTAAACTGTGTTTGGAATTC  1079