BAC Information

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BAC

Clone NameB6Ng01-228M10
Chromosome6 (Build37)
Map Location 74,234,509 - 74,394,613
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr210-ps1, 4931417E11Rik, LOC100043338
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228M10.bB6Ng01-228M10.g
ACCGA042106GA042107
length1,1261,109
definitionB6Ng01-228M10.b B6Ng01-228M10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,234,509 - 74,235,648)(74,393,509 - 74,394,613)
sequence
gaattcattgagcctccctagattatccaagttactactcataatacgtt
ataggctagcaaataaccatagttccaactgcagctttaattcccccttg
ttacgtaccatatattcattggttctttagtgttagaacatggaaatcta
ctgcagatgataattcattctagtgcactgtttaactgtcagtgagtaat
gaagtacaattttaatttactttggagagttcttagttcactgttgcata
ttgtaaatgcaaatgtacataaattgagtttgaagaagcaggtaaaaaag
atatcagctctatgaaaaatgtaaattagaatatgctcatataatgcagc
ttttcttcagtatagaacacagtaacctagactttctgcttattctctaa
agtaaatcctgctcttgggactttgactcatggctggtgggaagatatac
cactgtagtcactgttgaaactaaatcagcatcatctgaaaaaaatgtat
aagtatgttctatgataatagaatttctgctccaagaacataaaacaaat
aaattcatgctctgatccataaagggtatgtacaagggtatttctcatac
tgcattttatgtggctgggagctagaggcagcctgtattgtcaatgtgat
agtggagggatggaaatatgataaataatgaggcgaacaggagagatctg
tgaaggaattaagaacaatgatcatttacaagggtaaattagcatatagt
ctgcaaaacttattgctgcacattataatttatacaaatgtataaataaa
tcaatgtgcattttcaagaaaatatttagaagacctaaaacaaacacata
taatcagttttattttgaataagttgtttaacaagcatgatcgtcagcat
atgagacagcaaagttctgaaaacctgcaagcaagggcaaagtgggaaga
gaaaaaaaaaaaagcaaacgaaacaaaccaaaggaaggcatttacagatg
catgaatgaaaataatttcaacactggagtgagagatatcagtattaaaa
gtattttctgtctttgttctcgtacacacattcagaggctcagtattata
atgcctcgcttctggccagtatgttc

gaattctcgagttactgtagcagaatagtatcagcactcttgaatggaaa
tacgcctttgttgcaaataagccttgttgcaaataaggaatgacaagaaa
ataggaagaagcttttcaacctatatatgctcattaacagatatacaata
ttaatgtagtgatatattcacatatattattagctcacatgtgtgttcat
ataaaatatatcagcatatattaatatataacatattaatatataatatt
gatgtatagtgatacatatgctaataatgtaattatatattaatttatag
atgtgtgctataatataaatggaggttactctaagaaagaactgtcctta
aagaccaacctaaaattttagcttatattgtatctagaacaacaaaaaat
tatatctttacagagctgatgtgctttgaatacgaaatgtctccagttgt
ttacatactaagtccttagctagtggtactactcgagaaaatgataccat
ttttagaatgtggaccctaactggagggagtaggtcacttaaggatttac
agttcatctgcacctcttctgtgcactccctgtttctggagtgtggatac
aatgtgaccagctagcctcttgttcctggagacactgtgaccagctagcc
tcttgttcctggagacactgtgaccagctagcctcttgttcccaccactc
tgctttcactctcatcatggaacatatttctttgaagtttagtcctaaat
acacactttttctctaaattgcttttttttttcttcaggaatttcctcac
aggaaaggaaacaaacagagaagacctattacagaataaaagaaaagaca
agtgattctatatgagcaactatttggagggagatacataaagaacagaa
aagttagctggccaggattgttcaatatgaattcttctggattcctgtct
gcactgatgagaacttacagctgcccttccttacaggtaagttctctttc
cttcccacagagaataagacctctattatgtatctatacatataagatat
gatggtgtgaattggatgtaacgtcccctcatgtatttagtgctttgctt
tttaacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74234509_74235648
seq2: B6Ng01-228M10.b_49_1174

seq1  GAATTCATTGAGCCTCCCTAGATTATCCAAGTTACTACTCATAATACGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAGCCTCCCTAGATTATCCAAGTTACTACTCATAATACGTT  50

seq1  ATAGGCTAGCAAATAACCATAGTTCCAACTGCAGCTTTAATTCCCCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTAGCAAATAACCATAGTTCCAACTGCAGCTTTAATTCCCCCTTG  100

seq1  TTACGTACCATATATTCATTGGTTCTTTAGTGTTAGAACATGGAAATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTACCATATATTCATTGGTTCTTTAGTGTTAGAACATGGAAATCTA  150

seq1  CTGCAGATGATAATTCATTCTAGTGCACTGTTTAACTGTCAGTGAGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGATGATAATTCATTCTAGTGCACTGTTTAACTGTCAGTGAGTAAT  200

seq1  GAAGTACAATTTTAATTTACTTTGGAGAGTTCTTAGTTCACTGTTGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACAATTTTAATTTACTTTGGAGAGTTCTTAGTTCACTGTTGCATA  250

seq1  TTGTAAATGCAAATGTACATAAATTGAGTTTGAAGAAGCAGGTAAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAATGCAAATGTACATAAATTGAGTTTGAAGAAGCAGGTAAAAAAG  300

seq1  ATATCAGCTCTATGAAAAATGTAAATTAGAATATGCTCATATAATGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGCTCTATGAAAAATGTAAATTAGAATATGCTCATATAATGCAGC  350

seq1  TTTTCTTCAGTATAGAACACAGTAACCTAGACTTTCTGCTTATTCTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCAGTATAGAACACAGTAACCTAGACTTTCTGCTTATTCTCTAA  400

seq1  AGTAAATCCTGCTCTTGGGACTTTGACTCATGGCTGGTGGGAAGATATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATCCTGCTCTTGGGACTTTGACTCATGGCTGGTGGGAAGATATAC  450

seq1  CACTGTAGTCACTGTTGAAACTAAATCAGCATCATCTGAAAAAAATGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAGTCACTGTTGAAACTAAATCAGCATCATCTGAAAAAAATGTAT  500

seq1  AAGTATGTTCTATGATAATAGAATTTCTGCTCCAAGAACATAAAACAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGTTCTATGATAATAGAATTTCTGCTCCAAGAACATAAAACAAAT  550

seq1  AAATTCATGCTCTGATCCATAAAGGGTATGTACAAGGGTATTTCTCATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATGCTCTGATCCATAAAGGGTATGTACAAGGGTATTTCTCATAC  600

seq1  TGCATTTTATGTGGCTGGGAGCTAGAGGCAGCCTGTATTGTCAATGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTATGTGGCTGGGAGCTAGAGGCAGCCTGTATTGTCAATGTGAT  650

seq1  AGTGGAGGGATGGAAATATGATAAATAATGAGGCGAACAGGAGAGATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGGGATGGAAATATGATAAATAATGAGGCGAACAGGAGAGATCTG  700

seq1  TGAAGGAATTAAGAACAATGATCATTTACAAGGGTAAATTAGCATATAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAATTAAGAACAATGATCATTTACAAGGGTAAATTAGCATATAGT  750

seq1  CTGCAAAACTTATTGCTGCACATTATAATTTATACAAATGTATAAATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAACTTATTGCTGCACATTATAATTTATACAAATGTATAAATAAA  800

seq1  TCAATGTGCATTTTCAAGAAAATATTTAGAAGACCTAAAACAAACACATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTGCATTTTCAAGAAAATATTTAGAAGACCTAAAACAAACACATA  850

seq1  TAATCAGTTTTATTTTGAATAAGTTGTTTAACAAGCATGATCGTCAGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGTTTTATTTTGAATAAGTTGTTTAACAAGCATGATCGTCAGCAT  900

seq1  ATGAGACAGCAAAGTTCTGAAAACCTGCAAGCAAGGGCAAAGTGGGGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATGAGACAGCAAAGTTCTGAAAACCTGCAAGCAAGGGCAAAGT-GGGAAG  949

seq1  AGAAAAAAAAAAAAGCAAACGAAACAAAACCAAAGGAAGGCATTTACAGA  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGAAAAAAAAAAAAGCAAACGAAAC-AAACCAAAGGAAGGCATTTACAGA  998

seq1  TGCATGAAATGAAAATAATTTCAACACTGGGAAGTGGAGAGATATTTCAG  1050
      |||||| |||||||||||||||||||||||  ||| ||||||||  ||||
seq2  TGCATG-AATGAAAATAATTTCAACACTGG--AGT-GAGAGATA--TCAG  1042

seq1  TATTTAAAAGTATTTTTCTGGTCTTTGTTTCTCTGTACACACATCAGGAG  1100
      || ||||||||| |||||| ||||||| ||||| ||||||||||   || 
seq2  TA-TTAAAAGTA-TTTTCT-GTCTTTG-TTCTC-GTACACACATTCAGA-  1086

seq1  GGCTCAGGGTATTAT-ATG-CTCGCTTCTGGCCAGTATGTTC  1140
      ||||||  ||||||| ||| ||||||||||||||||||||||
seq2  GGCTCA--GTATTATAATGCCTCGCTTCTGGCCAGTATGTTC  1126


seq1: chr6_74393509_74394613
seq2: B6Ng01-228M10.g_71_1179 (reverse)

seq1  AATGTTAAAAGCAAAAGCA-TAAATACAT-AGGGGACGTTTTACAATCAA  48
      ||||||||||   |||||| ||||||||| ||||||||  |||||  |||
seq2  AATGTTAAAAAGCAAAGCACTAAATACATGAGGGGACG--TTACATCCAA  48

seq1  ATCACACCATCATATC-TATATGTATAGATACAT-ATAGAGGTC-TATTC  95
       ||||||||||||||| ||||||||||||||||| ||||||||| |||||
seq2  TTCACACCATCATATCTTATATGTATAGATACATAATAGAGGTCTTATTC  98

seq1  TCTGTTGGGAAGGAAAGAGAACTTACCGTTAAGGAAGGGCAGCTGTAAGT  145
      |||| ||||||||||||||||||||||  |||||||||||||||||||||
seq2  TCTG-TGGGAAGGAAAGAGAACTTACCTGTAAGGAAGGGCAGCTGTAAGT  147

seq1  TCTCATCAGTGCAGACAGGAATCCAGGAGAATTCATA-TGAACAATCCTT  194
      |||||||||||||||||||||||||| |||||||||| ||||||||||| 
seq2  TCTCATCAGTGCAGACAGGAATCCAGAAGAATTCATATTGAACAATCCTG  197

seq1  GCCAGCTAACTTTTCTGTTCTTTATGTATCTCCCTCCAAATAGTTGCTCA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTAACTTTTCTGTTCTTTATGTATCTCCCTCCAAATAGTTGCTCA  247

seq1  TATAGAATCACTTGTCTTTTCTTTTATTCTGTAATAGGTCTTCTCTGTTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAATCACTTGTCTTTTCTTTTATTCTGTAATAGGTCTTCTCTGTTT  297

seq1  GTTTCCTTTCCTGTGAGGAAATTCCTGAAG-AAAAAAAAAGCAATTTAGA  343
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTTTCCTTTCCTGTGAGGAAATTCCTGAAGAAAAAAAAAAGCAATTTAGA  347

seq1  GAAAAAGTGTGTATTTAGGACTAAACTTCAAAGAAATATGTTCCATGATG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGTGTGTATTTAGGACTAAACTTCAAAGAAATATGTTCCATGATG  397

seq1  AGAGTGAAAGCAGAGTGGTGGGAACAAGAGGCTAGCTGGTCACAGTGTCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAAAGCAGAGTGGTGGGAACAAGAGGCTAGCTGGTCACAGTGTCT  447

seq1  CCAGGAACAAGAGGCTAGCTGGTCACAGTGTCTCCAGGAACAAGAGGCTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAACAAGAGGCTAGCTGGTCACAGTGTCTCCAGGAACAAGAGGCTA  497

seq1  GCTGGTCACATTGTATCCACACTCCAGAAACAGGGAGTGCACAGAAGAGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCACATTGTATCCACACTCCAGAAACAGGGAGTGCACAGAAGAGG  547

seq1  TGCAGATGAACTGTAAATCCTTAAGTGACCTACTCCCTCCAGTTAGGGTC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGAACTGTAAATCCTTAAGTGACCTACTCCCTCCAGTTAGGGTC  597

seq1  CACATTCTAAAAATGGTATCATTTTCTCGAGTAGTACCACTAGCTAAGGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCTAAAAATGGTATCATTTTCTCGAGTAGTACCACTAGCTAAGGA  647

seq1  CTTAGTATGTAAACAACTGGAGACATTTCGTATTCAAAGCACATCAGCTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTATGTAAACAACTGGAGACATTTCGTATTCAAAGCACATCAGCTC  697

seq1  TGTAAAGATATAATTTTTTGTTGTTCTAGATACAATATAAGCTAAAATTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGATATAATTTTTTGTTGTTCTAGATACAATATAAGCTAAAATTT  747

seq1  TAGGTTGGTCTTTAAGGACAGTTCTTTCTTAGAGTAACCTCCATTTATAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGGTCTTTAAGGACAGTTCTTTCTTAGAGTAACCTCCATTTATAT  797

seq1  TATAGCACACATCTATAAATTAATATATAATTACATTATTAGCATATGTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCACACATCTATAAATTAATATATAATTACATTATTAGCATATGTA  847

seq1  TCACTATACATCAATATTATATATTAATATGTTATATATTAATATATGCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATACATCAATATTATATATTAATATGTTATATATTAATATATGCT  897

seq1  GATATATTTTATATGAACACACATGTGAGCTAATAATATATGTGAATATA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATTTTATATGAACACACATGTGAGCTAATAATATATGTGAATATA  947

seq1  TCACTACATTAATATTGTATATCTGTTAATGAGCATATATAGGTTGAAAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACATTAATATTGTATATCTGTTAATGAGCATATATAGGTTGAAAA  997

seq1  GCTTCTTCCTATTTTCTTGTCATTCCTTATTTGCAACAAGGCTTATTTGC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTCCTATTTTCTTGTCATTCCTTATTTGCAACAAGGCTTATTTGC  1047

seq1  AACAAAGGCGTATTTCCATTCAAGAGTGCTGATACTATTCTGCTACAGTA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGCGTATTTCCATTCAAGAGTGCTGATACTATTCTGCTACAGTA  1097

seq1  ACTCGAGAATTC  1105
      ||||||||||||
seq2  ACTCGAGAATTC  1109


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