BAC Information

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BAC

Clone NameB6Ng01-230K17
Chromosome6 (Build37)
Map Location 19,671,420 - 19,672,499
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230K17.bB6Ng01-230K17.g
ACCGA043473GA043474
length9331,092
definitionB6Ng01-230K17.b B6Ng01-230K17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcccactattattgtgtgaggtgcaatatgtgctttgaacttta
ctaaagtttctttaatgaatgtcgctgcccttgcatttggagcatagaca
ttcagaattgagagttccttttggatgattttacctttgatgagtatgaa
gtgtccctccttgtcttttttgataactttgagttggaagttgattttat
tcgatgttagaatggctactccagcttgtttcctcagaccatttgcttgg
aaaattgttttcccgactttcactctgaggtagtgtctgtctttttttcc
tgagatgggtttcctgtaagcagcagaatgttgggtcctgtttgtatagc
cagtctgttagtttatgtctttttattggggaattgagtccattgatatt
aagatatattaaggaaaagtaaatgttgcttcctattatttatgttgtta
gagttggcattctgttcttgtggctgtcttctttttggtttgtagaagga
ttactttcttgcttttcctagagcggggtttctgtccttttattgttttt
ttttttttttttcggtcataatcatttgaagggctgaatttgctttcaaa
tggaaagataatgtgtaaatttggtttttgttgtggattactttggtttc
tccatctatggtaattgagagtttggctggttatagtagcctaggctatt
tgagttctcatagtgtctgtataacatctgtccagaatcttctggctttc
attgtctctggtgaaagtctcttgtaattctgataggcctgcctttatat
gttacttgacttttttcccttactgcttttaatattctatctttatttag
tgcatttgttattctgattattatgtgtcgggaggaattttctttttctg
gtccagtctattttgaagttctgtaggcttctt

gaattcaaatttgttttcacatttggtgaaatgacacagaggggcaatga
tttgatttctgtccttcatatgacatggaagcaccattgatgaatctagg
tttattcaagccaactggaatttggtttttattctgctatatcaatgcag
ctgataaattgcacatttgaagtatgcattgtaatcatgtcatttgagat
gtttttaggactctactatcttatctacctttaccactactagaatgttg
gagtgttttgtggcttctatgtgattcattttaaagtttaaatccaaata
aactcttaactccactaatgtcctcaagtgtcttggtgttttttattgtt
ttgtcatgttatttttcataaaaatgataaaatgccataacaataattta
taggtatagtgcacaaatgaatgcttaatatttccaatgaataaacccag
ttaacacagcccataactcccaggttatttgtatgttatgttaatttata
tacagggtatctgttcttgtattaaacatgctcacataattttaattaat
tttgacttacatttattatttaatattcactatttaaatgatcttctgta
gtagcttgtgccctcatgctattttttttttaatcaaaaatacctgtttc
ctgtgtccagcacataggctgaaggaagcctgccccgaggttggctcaga
tggggaaataaagtagccaatggccattggcttggcaggatgaaggaggc
tggatttttacaattccagaacaagggaagaaaggaagtaggaggagtag
actggccatgatggggaagcagagagattagaccttaggccagccaacat
ataagaatcaggtaagtggtcacaaggggccactctcttgatttgggttt
gaggtagcagacataaatagattattagattatattatagattttgcagt
ataacacagaaataccagaggggaaagtatgctatcagcagagaagtttt
taagtgcccagccattggagcaagttaagtatattcaaaagtcaagctag
caacacatgttgagtgtgtgatgttgttgtgtgtgtgctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19671420_19672499
seq2: B6Ng01-230K17.g_68_1159

seq1  GAATTCAAATTTGTTTTCACATTTGGTGAAATGACACAGAGGGGCAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTTGTTTTCACATTTGGTGAAATGACACAGAGGGGCAATGA  50

seq1  TTTGATTTCTGTCCTTCATATGACATGGAAGCACCATTGATGAATCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTCTGTCCTTCATATGACATGGAAGCACCATTGATGAATCTAGG  100

seq1  TTTATTCAAGCCAACTGGAATTTGGTTTTTATTCTGCTATATCAATGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAAGCCAACTGGAATTTGGTTTTTATTCTGCTATATCAATGCAG  150

seq1  CTGATAAATTGCACATTTGAAGTATGCATTGTAATCATGTCATTTGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAATTGCACATTTGAAGTATGCATTGTAATCATGTCATTTGAGAT  200

seq1  GTTTTTAGGACTCTACTATCTTATCTACCTTTACCACTACTAGAATGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAGGACTCTACTATCTTATCTACCTTTACCACTACTAGAATGTTG  250

seq1  GAGTGTTTTGTGGCTTCTATGTGATTCATTTTAAAGTTTAAATCCAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTTTGTGGCTTCTATGTGATTCATTTTAAAGTTTAAATCCAAATA  300

seq1  AACTCTTAACTCCACTAATGTCCTCAAGTGTCTTGGTGTTTTTTATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTAACTCCACTAATGTCCTCAAGTGTCTTGGTGTTTTTTATTGTT  350

seq1  TTGTCATGTTATTTTTCATAAAAATGATAAAATGCCATAACAATAATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATGTTATTTTTCATAAAAATGATAAAATGCCATAACAATAATTTA  400

seq1  TAGGTATAGTGCACAAATGAATGCTTAATATTTCCAATGAATAAACCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATAGTGCACAAATGAATGCTTAATATTTCCAATGAATAAACCCAG  450

seq1  TTAACACAGCCCATAACTCCCAGGTTATTTGTATGTTATGTTAATTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACAGCCCATAACTCCCAGGTTATTTGTATGTTATGTTAATTTATA  500

seq1  TACAGGGTATCTGTTCTTGTATTAAACATGCTCACATAATTTTAATTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGTATCTGTTCTTGTATTAAACATGCTCACATAATTTTAATTAAT  550

seq1  TTTGACTTACATTTATTATTTAATATTCACTATTTAAATGATCTTCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTTACATTTATTATTTAATATTCACTATTTAAATGATCTTCTGTA  600

seq1  GTAGCTTGTGCCCTCATGCTATTTTTTTTTTAATCAAAAATACCTGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTGTGCCCTCATGCTATTTTTTTTTTAATCAAAAATACCTGTTTC  650

seq1  CTGTGTCCAGCACATAGGCTGAAGGAAGCCTGCCCCGAGGTTGGCTCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCAGCACATAGGCTGAAGGAAGCCTGCCCCGAGGTTGGCTCAGA  700

seq1  TGGGGAAATAAAGTAGCCAATGGCCATTGGCTTGGCAGGATGAAGGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAATAAAGTAGCCAATGGCCATTGGCTTGGCAGGATGAAGGAGGC  750

seq1  TGGATTTTTACAATTCCAGAACAAGGGAAGAAAGGAAGTAGGAGGAGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTTTACAATTCCAGAACAAGGGAAGAAAGGAAGTAGGAGGAGTAG  800

seq1  ACTGGCCATGATGGGGAAGCAGAGAGATTAGACCTTAGGCCAGCCAACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCATGATGGGGAAGCAGAGAGATTAGACCTTAGGCCAGCCAACAT  850

seq1  ATAAGAATCAGGGTAAGTGGTCAC-AGGGGCCACTCTCTTGATTTGGGTT  899
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  ATAAGAATCA-GGTAAGTGGTCACAAGGGGCCACTCTCTTGATTTGGGTT  899

seq1  TGAGGTAGCAGACATAAATAGATTA-TAGATTATATTATAGATTTTGCAA  948
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  TGAGGTAGCAGACATAAATAGATTATTAGATTATATTATAGATTTTGC-A  948

seq1  GTATTAACACAGAAATACCAGAGGGGAAAGTATGCTATCAGCAGAGAGGT  998
      ||| ||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTA-TAACACAGAAATACCAGAGGGGAAAGTATGCTATCAGCAGAGAAGT  997

seq1  TTTTAAGTGCCCAGCCATT-GAGCAAGTTAAGTATAT--CAAAGTCAAGC  1045
      ||||||||||||||||||| |||||||||||||||||   ||||||||||
seq2  TTTTAAGTGCCCAGCCATTGGAGCAAGTTAAGTATATTCAAAAGTCAAGC  1047

seq1  TAGC-ACACGTG-TGAGTGTGTG-------TGTGTGTGTG-TGTG  1080
      |||| |||| || ||||||||||       |||||||||| ||||
seq2  TAGCAACACATGTTGAGTGTGTGATGTTGTTGTGTGTGTGCTGTG  1092


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