BAC Information

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BAC

Clone NameB6Ng01-231B12
Chromosome6 (Build37)
Map Location 94,284,907 - 94,420,117
singlet/doubletdoublet
Overlap geneLOC100043262, LOC665856
Upstream geneLOC665831, Magi1
Downstream geneSlc25a26, Lrig1, LOC625941, EG665865, LOC100043276, LOC100043680, Kbtbd8, LOC435912
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231B12.bB6Ng01-231B12.g
ACCGA043785GA043786
length1,0071,184
definitionB6Ng01-231B12.b B6Ng01-231B12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,419,601 - 94,420,117)(94,284,907 - 94,286,082)
sequence
gaattcattttggattctacacctccaccaagctaaggactatcaccact
cactgagacaagccagcgcttcccctctcaccccatcctgggctagacat
tgtccccagccctagggctccctactccattctcagttcttcctctattc
ccagaggagcctgggtgtccaagagtcagagaaccccacggccccggcct
tatcaaaggtcctgggaccctccaaaccacctccagcatttccatatctc
agactgcacttccccaccccagcacttccctgtagttcagcaccagtacc
agggtgggataagcaatgtcttcctcccaaagaggccttgccagcagcct
cgaagcagacacagagaagacttggactgacaaaagctgtgatcacaacg
aataaaataaagtgtttacttactctcatgattcaggaaaaataagggtc
tatcatggcaaggaagcatggcagcaagtggcaggcgtgaacagaaagtt
gagagctcacaacctcaaccaaactcaaggcaaaaagaagagactggaag
tgacacagagcctttaaactctcaaagcccacctccagtgaaattctttc
tccgacaagactgcatttcccaaacctccccacatagtgccatcaactgg
gaaccaagtgttcaaacatctgagtctatgggggaatattcccattcaag
ccaccacaaggatcactggatgggtgagtgtaagcataaagaccagggtg
cagttaaggctcagaggcatgtcaaagtggaagttcagagttgtggttaa
aggtgagaatcatgtttcatggtcagggtcgagacagtgatagacaagtt
cagcgtgataatcaaggtaagggatcacagtaagggataggctcgcaaga
gtcaaggctagagtgaagaagagggtcaaaggtgaggcttcgtgtcaagg
catatgtggaaatgtgggggtgactgttaatgtgtttgaagagtcgagtt
cagatca

gaattctatgagttcaataatgaagctccagtttcctctctgtgatttaa
aactgaacaggaaacagggaccgatggcctagccagttcaaggtcaaagc
tggccgtctcttgtcatcacctacttgtaatccttgctttgaacttttag
aaatggtcctttgattttcctttgtaacatcacatcaggttcatgtggtt
tgtttgtttcgtgactatgcctcaaggataggtaaattacctagacctga
accactgaaagaaggcatatctctagtcaatgtgattgatcccaaaatgg
gcacatgacccaacctgggcttttaagaatcctggagcttttcatcaaaa
caaagagccatgtttagtgtggattgttaagggtgggagaatttacattg
agagctactctggaatatctctgatgctatatggaagtctttccataaaa
ggaagaaacaattgagcagtgaggacagtggaatacagggacgaggatag
cagtattgggtggtatcatctcagcctctgggccagctcagctactgcac
tgactccttcttcacagagaagccgcttcctctgcacatgtccaaaactc
tgttcaatgcacaggaacacagactttcttcccaccttgaacgccaactc
tcagacattctgaaaacaacacagcagtgactgaagctgttgcatgtttt
cagtttcatacatcaaaactccagtaagttaaaactggaggaatcccaga
aggcttgctacttaaaaggtaaagtgactgtccccaggccatatgctgtg
gtataattggactgtcgtgatgttggagtctagtaagtatactttagtaa
aatgggaattcagaactgaagattcttcatggtaataagttctaggatca
attattggacagcaattgacttttcaaaaagcaaggagacttgagaactt
cagatacatcacatatagcaaggattagttatattttcgtgaagtctttt
attttcttgttgacttataaaaatgtagaagccacatattacaaagatgt
tttgttgtagtgagtctgcatttttactaatggccttatgttcaaagttg
gaatccttctttggagatattaagaactcatataggtggtgtgcttttta
atccaaggaagcagtatggattccatatcagtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_94419601_94420117
seq2: B6Ng01-231B12.b_48_564 (reverse)

seq1  TGAGGTTGTGAGCTCTCAACTTTCTGTTCACGCCTGCCACTTGCTGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTGTGAGCTCTCAACTTTCTGTTCACGCCTGCCACTTGCTGCCAT  50

seq1  GCTTCCTTGCCATGATAGACCCTTATTTTTCCTGAATCATGAGAGTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTTGCCATGATAGACCCTTATTTTTCCTGAATCATGAGAGTAAGT  100

seq1  AAACACTTTATTTTATTCGTTGTGATCACAGCTTTTGTCAGTCCAAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTTATTTTATTCGTTGTGATCACAGCTTTTGTCAGTCCAAGTCT  150

seq1  TCTCTGTGTCTGCTTCGAGGCTGCTGGCAAGGCCTCTTTGGGAGGAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTCTGCTTCGAGGCTGCTGGCAAGGCCTCTTTGGGAGGAAGAC  200

seq1  ATTGCTTATCCCACCCTGGTACTGGTGCTGAACTACAGGGAAGTGCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTATCCCACCCTGGTACTGGTGCTGAACTACAGGGAAGTGCTGGG  250

seq1  GTGGGGAAGTGCAGTCTGAGATATGGAAATGCTGGAGGTGGTTTGGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAAGTGCAGTCTGAGATATGGAAATGCTGGAGGTGGTTTGGAGGG  300

seq1  TCCCAGGACCTTTGATAAGGCCGGGGCCGTGGGGTTCTCTGACTCTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGACCTTTGATAAGGCCGGGGCCGTGGGGTTCTCTGACTCTTGGA  350

seq1  CACCCAGGCTCCTCTGGGAATAGAGGAAGAACTGAGAATGGAGTAGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGGCTCCTCTGGGAATAGAGGAAGAACTGAGAATGGAGTAGGGAG  400

seq1  CCCTAGGGCTGGGGACAATGTCTAGCCCAGGATGGGGTGAGAGGGGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGGCTGGGGACAATGTCTAGCCCAGGATGGGGTGAGAGGGGAAGC  450

seq1  GCTGGCTTGTCTCAGTGAGTGGTGATAGTCCTTAGCTTGGTGGAGGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTGTCTCAGTGAGTGGTGATAGTCCTTAGCTTGGTGGAGGTGTA  500

seq1  GAATCCAAAATGAATTC  517
      |||||||||||||||||
seq2  GAATCCAAAATGAATTC  517


seq1: chr6_94284907_94286082
seq2: B6Ng01-231B12.g_68_1251

seq1  GAATTCTATGAGTTCAATAATGAAGCTCCAGTTTCCTCTCTGTGATTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGAGTTCAATAATGAAGCTCCAGTTTCCTCTCTGTGATTTAA  50

seq1  AACTGAACAGGAAACAGGGACCGATGGCCTAGCCAGTTCAAGGTCAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACAGGAAACAGGGACCGATGGCCTAGCCAGTTCAAGGTCAAAGC  100

seq1  TGGCCGTCTCTTGTCATCACCTACTTGTAATCCTTGCTTTGAACTTTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGTCTCTTGTCATCACCTACTTGTAATCCTTGCTTTGAACTTTTAG  150

seq1  AAATGGTCCTTTGATTTTCCTTTGTAACATCACATCAGGTTCATGTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTCCTTTGATTTTCCTTTGTAACATCACATCAGGTTCATGTGGTT  200

seq1  TGTTTGTTTCGTGACTATGCCTCAAGGATAGGTAAATTACCTAGACCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTCGTGACTATGCCTCAAGGATAGGTAAATTACCTAGACCTGA  250

seq1  ACCACTGAAAGAAGGCATATCTCTAGTCAATGTGATTGATCCCAAAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGAAAGAAGGCATATCTCTAGTCAATGTGATTGATCCCAAAATGG  300

seq1  GCACATGACCCAACCTGGGCTTTTAAGAATCCTGGAGCTTTTCATCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGACCCAACCTGGGCTTTTAAGAATCCTGGAGCTTTTCATCAAAA  350

seq1  CAAAGAGCCATGTTTAGTGTGGATTGTTAAGGGTGGGAGAATTTACATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGCCATGTTTAGTGTGGATTGTTAAGGGTGGGAGAATTTACATTG  400

seq1  AGAGCTACTCTGGAATATCTCTGATGCTATATGGAAGTCTTTCCATAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTACTCTGGAATATCTCTGATGCTATATGGAAGTCTTTCCATAAAA  450

seq1  GGAAGAAACAATTGAGCAGTGAGGACAGTGGAATACAGGGACGAGGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAACAATTGAGCAGTGAGGACAGTGGAATACAGGGACGAGGATAG  500

seq1  CAGTATTGGGTGGTATCATCTCAGCCTCTGGGCCAGCTCAGCTACTGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTGGGTGGTATCATCTCAGCCTCTGGGCCAGCTCAGCTACTGCAC  550

seq1  TGACTCCTTCTTCACAGAGAAGCCGCTTCCTCTGCACATGTCCAAAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCTTCTTCACAGAGAAGCCGCTTCCTCTGCACATGTCCAAAACTC  600

seq1  TGTTCAATGCACAGGAACACAGACTTTCTTCCCACCTTGAACGCCAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAATGCACAGGAACACAGACTTTCTTCCCACCTTGAACGCCAACTC  650

seq1  TCAGACATTCTGAAAACAACACAGCAGTGACTGAAGCTGTTGCATGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACATTCTGAAAACAACACAGCAGTGACTGAAGCTGTTGCATGTTTT  700

seq1  CAGTTTCATACATCAAAACTCCAGTAAGTTAAAACTGGAGGAATCCCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCATACATCAAAACTCCAGTAAGTTAAAACTGGAGGAATCCCAGA  750

seq1  AGGCTTGCTACTTAAAAGGTAAAGTGACTGTCCCCAGGCCATATGCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGCTACTTAAAAGGTAAAGTGACTGTCCCCAGGCCATATGCTGTG  800

seq1  GTATAATTGGACTGTCGTGATGTTGGAGTCTAGTAAGTATACTTTAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATTGGACTGTCGTGATGTTGGAGTCTAGTAAGTATACTTTAGTAA  850

seq1  AAT-GGAATTCAGAACTGAAGATTCTTCATGGTAATAAGTTCTAGGATCA  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAATTCAGAACTGAAGATTCTTCATGGTAATAAGTTCTAGGATCA  900

seq1  ATTATTGGACAGCAATTGACTTTTCAAAAAGCAAGGAGACTTGAGAACTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGGACAGCAATTGACTTTTCAAAAAGCAAGGAGACTTGAGAACTT  950

seq1  CAGAATACATCACATATAGCAAGGATTAGTAATA-TTTCGTGAAGTC-TT  997
      ||| |||||||||||||||||||||||||| ||| |||||||||||| ||
seq2  CAG-ATACATCACATATAGCAAGGATTAGTTATATTTTCGTGAAGTCTTT  999

seq1  TATTT--CTGTTGAC-TATAAAAATGTAGAAG-CACATA-TACAAAGATG  1042
      |||||   ||||||| |||||||||||||||| |||||| ||||||||||
seq2  TATTTTCTTGTTGACTTATAAAAATGTAGAAGCCACATATTACAAAGATG  1049

seq1  TTT--GTGTAGTGAGTCTGCATTTTTACT-ATGG-CTTATGGTCAAAGTT  1088
      |||   ||||||||||||||||||||||| |||| |||||| ||||||||
seq2  TTTTGTTGTAGTGAGTCTGCATTTTTACTAATGGCCTTATGTTCAAAGTT  1099

seq1  GGAAAACCTCTTTGGAGGATATT-AGAACTTCTTTTATGT-GTGTGCTTT  1136
      ||||  | |||||||| |||||| ||||| || | || || |||||||||
seq2  GGAATCCTTCTTTGGA-GATATTAAGAAC-TCATATAGGTGGTGTGCTTT  1147

seq1  TT-ATCAAAAAGGAAAAGCAGTATGTTTTCCCTATCAGTAA  1176
      || |||   ||||  ||||||||||  |||| |||||||||
seq2  TTAATC--CAAGG--AAGCAGTATGGATTCCATATCAGTAA  1184


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