BAC Information

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BAC

Clone NameB6Ng01-232K15
Chromosome6 (Build37)
Map Location 129,038,291 - 129,039,509
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f
Downstream geneClec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232K15.bB6Ng01-232K15.g
ACCGA044942GA044943
length1,2351,011
definitionB6Ng01-232K15.b B6Ng01-232K15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtgaatatgagaagattttttgaacagctgtcacctgtagat
ggcggcagtgtcacctacaacagcaagtgaaaacacttttatctccatga
tgaattattgaaagactaagatagtaagcatgtactgagcatggtgagac
atgttcacagataagcctaccagtattatagttgtccattgagctatttt
acacactacaaagctctgtgatagctgctgacttgtccagcaggtccagt
tatttgagggtcttgaggggaccttctcctaagaaccaaatggagggagg
gagagacggacaccaagtgcaggaacgacacggcggaagcagtctgagta
gcatcaaggtgtcactgtattcagcatggctcaaggcttaaatgcacaag
caaaaggggaagtacgtctcagcaggaggaatggggaagcagaaatgcac
aagcaaaggaggaagtacttctcagcaggaggaatggggcagcataaatg
cacaagcaaaggaggaagtacttctcagcaggatgggtggggcagtggaa
atttttcttttggcagctacatggggaagcagaaacttggtggtatcagg
gtgtggtcaggacatctggcgctgacttagggctggaacattctgtggtt
gttctcagaagggtgcgtcagtagcgcgcttttgacccccttttcttcta
ggggggacagatccaatttggagatcaagtcaatagagttgtcgtaatag
ctcccaacaagctgctacaaaagttcctaagttattggactataaatagg
gtaatctatattttcgtggtatatgtcttagaagccagtttgtacagttt
gttgtgggaggtgtggccttgttggaggaggtgtggtcttattgctggag
tcatgtcactggggttgggttcctaaaatcccacagcatccccagttcat
gctctgtctgtctgtggtggtctctcaatatgtcaccccacctgttccaa
taggatacctgcctggtttctatcatgctcctccatcaagggtggtcatt
ttactcatttactggaaatttaaagttaatttccaagtaatgggagcttt
tttattaaagttgtctttcatcaatgtgtctccttcacagcgcaatacac
aagtaacctaagaatggtactgtccaagccatactcggcaggctatacat
ttggttccaaagttccagttgtggagctcccatgc
gaattctgcactgaaaccttctggccctgggctttttttggttgggtgac
ttttaataattgcttctatttccttaggggatacagggctatttagatag
tttgacttatcttgattaaaatttggtagtaggtatctgtctagaaaatc
acccatttcatttagtttttccaaatttgggaagtaaagtcttttgaagt
gagacctaatgattctttgactttcctcaatgtccattgttatctctcct
ttttaatttctgattttgttaattagggtactgtctctctgccttttagt
tagtttggctaagggtttgtctatcttgttgatttttctcaaagaaccag
tcttggttttgttgatcctttgtatttttctctttgtttctagttgattg
atttcatcactaagcttatttcctgccgtttactcttcttgggtgtgttt
acttctttttttctagacatttcaggtgtactcttaaatcgttagtatga
gaactctccaatttctttacgaaggcactttatgctataaactttcctct
tagcactgctttcattgtgtcccataagtttggacatgttgtgccctcat
tttcactgacaagagagtctttaatttctttatgtctaccctgacccagt
gatcattcagtagatcattcagtttcatgactatgtaggacttctgttgt
ttctgttgttgtagaagtccagctttaatccatggtgatatgataaggtg
caaggggttattttcatctttttgtatctgttggggtttgctttgtgacc
gatcatgaggtcagttttagagaacattcagtgaggtgctgagaagaagg
tgtattactttgtgtttctgtgaaatattctatagatatcagttaggtcc
atttcgatcacacctctgttagtttcatcatttctctcttagtttctgtt
tcgatgatctgtccattggtgagatggggtttaaagtctccccattataa
tatgtgagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129038291_129039509
seq2: B6Ng01-232K15.b_47_1281

seq1  GAATTCCAGTGAATATGAGAAGATTTTTTGAACAGCTGTCACCTGTAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGAATATGAGAAGATTTTTTGAACAGCTGTCACCTGTAGAT  50

seq1  GGCGGCAGTGTCACCTACAACAGCAAGTGAAAACACTTTTATCTCCATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCAGTGTCACCTACAACAGCAAGTGAAAACACTTTTATCTCCATGA  100

seq1  TGAATTATTGAAAGACTAAGATAGTAAGCATGTACTGAGCATGGTGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATTGAAAGACTAAGATAGTAAGCATGTACTGAGCATGGTGAGAC  150

seq1  ATGTTCACAGATAAGCCTACCAGTATTATAGTTGTCCATTGAGCTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCACAGATAAGCCTACCAGTATTATAGTTGTCCATTGAGCTATTTT  200

seq1  ACACACTACAAAGCTCTGTGATAGCTGCTGACTTGTCCAGCAGGTCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTACAAAGCTCTGTGATAGCTGCTGACTTGTCCAGCAGGTCCAGT  250

seq1  TATTTGAGGGTCTTGAGGGGACCTTCTCCTAAGAACCAAATGGAGGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAGGGTCTTGAGGGGACCTTCTCCTAAGAACCAAATGGAGGGAGG  300

seq1  GAGAGACGGACACCAAGTGCAGGAACGACACGGCGGAAGCAGTCTGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACGGACACCAAGTGCAGGAACGACACGGCGGAAGCAGTCTGAGTA  350

seq1  GCATCAAGGTGTCACTGTATTCAGCATGGCTCAAGGCTTAAATGCACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAAGGTGTCACTGTATTCAGCATGGCTCAAGGCTTAAATGCACAAG  400

seq1  CAAAAGGGGAAGTACGTCTCAGCAGGAGGAATGGGGAAGCAGAAATGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGGGAAGTACGTCTCAGCAGGAGGAATGGGGAAGCAGAAATGCAC  450

seq1  AAGCAAAGGAGGAAGTACTTCTCAGCAGGAGGAATGGGGCAGCATAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAGGAGGAAGTACTTCTCAGCAGGAGGAATGGGGCAGCATAAATG  500

seq1  CACAAGCAAAGGAGGAAGTACTTCTCAGCAGGATGGGTGGGGCAGTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCAAAGGAGGAAGTACTTCTCAGCAGGATGGGTGGGGCAGTGGAA  550

seq1  ATTTTTCTTTTGGCAGCTACATGGGGAAGCAGAAACTTGGTGGTATCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTTTGGCAGCTACATGGGGAAGCAGAAACTTGGTGGTATCAGG  600

seq1  GTGTGGTCAGGACATCTGGCGCTGACTTAGGGCTGGAACATTCTGTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTCAGGACATCTGGCGCTGACTTAGGGCTGGAACATTCTGTGGTT  650

seq1  GTTCTCAGAAGGGTGCGTCAGTAGCGCGCTTTTGACCCCCTTTTCTTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGAAGGGTGCGTCAGTAGCGCGCTTTTGACCCCCTTTTCTTCTA  700

seq1  GGGGGGACAGATCCAATTTGGAGATCAAGTCAATAGAGTTGTCGTAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGACAGATCCAATTTGGAGATCAAGTCAATAGAGTTGTCGTAATAG  750

seq1  CTCCCAACAAGCTGCTACAAAAGTTCCTAAGTTATTGGACTATAAATAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAACAAGCTGCTACAAAAGTTCCTAAGTTATTGGACTATAAATAGG  800

seq1  GTAATCTATATTTTCGTGGTATATGTCTTAGAAGCCAGTTTGTACAGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCTATATTTTCGTGGTATATGTCTTAGAAGCCAGTTTGTACAGTTT  850

seq1  GTTGTGGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGTCTTATTGCTGGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGTCTTATTGCTGGAG  900

seq1  TCATGTCACTGGGGTTGGGTTCCTAAAATCCCACAGCATCCCCAGTTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCACTGGGGTTGGGTTCCTAAAATCCCACAGCATCCCCAGTTCAT  950

seq1  GCTCTGTCTGTCTTGTGGTTGTTCTCTCAATATGTCACCC--ACTGTTCC  998
      |||||||||||| ||||| || ||||||||||||||||||   |||||||
seq2  GCTCTGTCTGTC-TGTGG-TGGTCTCTCAATATGTCACCCCACCTGTTCC  998

seq1  AATAGGATACCTGCCTGTTTTCTATCATGCTCCT-CATC-ATGGTGGTCA  1046
      ||||||||||||||||| |||||||||||||||| |||| | ||||||||
seq2  AATAGGATACCTGCCTGGTTTCTATCATGCTCCTCCATCAAGGGTGGTCA  1048

seq1  -TTTACTCATTATCT-GAAATTT-AAGTAAATTTCC-AGTAAATGGAGCT  1092
       ||||||||||  || ||||||| |||| ||||||| |||||  ||||||
seq2  TTTTACTCATTTACTGGAAATTTAAAGTTAATTTCCAAGTAATGGGAGCT  1098

seq1  TTTAT----AAGTTGTC-TTCATCATTGTGTCT-CTTCACA--GCAATAC  1134
      ||| |    |||||||| ||||||| ||||||| |||||||  |||||||
seq2  TTTTTATTAAAGTTGTCTTTCATCAATGTGTCTCCTTCACAGCGCAATAC  1148

seq1  AAAAGTTAACTAAGATAGGAACTGTCCA--GCATACT--GCAGGCTATAC  1180
      | |||| | ||||||  || ||||||||   ||||||  |||||||||||
seq2  ACAAGTAACCTAAGAATGGTACTGTCCAAGCCATACTCGGCAGGCTATAC  1198

seq1  ATTGTGTCCCAGAGTTCCAGTTTTTGTGAGCTCCCATGC  1219
      |||  || ||| |||||||||| |   ||||||||||||
seq2  ATTTGGTTCCAAAGTTCCAGTTGT--GGAGCTCCCATGC  1235