MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-234C22
Chromosome	6 (Build37)
Map Location	108,198,003 - 108,198,737
singlet/doublet	singlet
Overlap gene	Itpr1
Upstream gene	Lrrn1, Setmar, Sumf1, LOC100043718
Downstream gene	LOC677205, Bhlhb2, Arl8b, Edem1, EG627371, LOC639110
Link	Open Mouse BAC browser

Click to get alignment info.

name	Lrrn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16979 MGI:106038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Setmar (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74729 MGI:1921979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 4 Proteins

name	Sumf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58911 MGI:1889844
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043718 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 344 ESTs, 9 Proteins

name	Itpr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16438 MGI:96623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC677205 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 233 ESTs, 13 Proteins pseudo : _no_value

name	Bhlhb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20893 MGI:1097714
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arl8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67166 MGI:1914416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Edem1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192193 MGI:2180139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627371 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627371 MGI:3648518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 230 ESTs, 28 Proteins

name	LOC639110 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Lrrn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365188 GeneID:16979 MGI:106038
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat protein 1, neuronal transcript_id : NM_008516.2

name	Setmar (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378019 GeneID:74729 MGI:1921979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 4 Proteins product : SET domain and mariner transposase fusion gene transcript_id : XM_982623.1

name	Sumf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144094255 GeneID:58911 MGI:1889844
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sulfatase modifying factor 1 transcript_id : NM_145937.2

name	LOC100043718 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255393 GeneID:100043718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 344 ESTs, 9 Proteins product : similar to rat ribosomal protein L36 transcript_id : XM_001480721.1

name	Itpr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475598 GeneID:16438 MGI:96623
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol 1,4,5-triphosphate receptor 1 transcript_id : NM_010585.2

name	Bhlhb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373546 GeneID:20893 MGI:1097714
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic helix-loop-helix domain containing, class B2 transcript_id : NM_011498.3

name	Arl8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115292448 GeneID:67166 MGI:1914416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 8B transcript_id : NM_026011.3

name	Edem1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119709811 GeneID:192193 MGI:2180139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ER degradation enhancer, mannosidase alpha-like 1 transcript_id : NM_138677.2

name	EG627371 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255258 GeneID:627371 MGI:3648518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 230 ESTs, 28 Proteins product : predicted gene, EG627371 transcript_id : XM_892026.3

name	Lrrn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678724 CCDS:CCDS20399.1 GeneID:16979 MGI:106038
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat protein 1, neuronal protein_id : NP_032542.1

name	Setmar (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378020 GeneID:74729 MGI:1921979
definition	codon_start : 1 product : SET domain and mariner transposase fusion protein_id : XP_987717.1

name	Sumf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144094256 GeneID:58911 MGI:1889844
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IPI] GO_process : GO:0030279 - negative regulation of ossification [Evidence IMP]; GO:0016567 - protein ubiquitination [Evidence IMP] codon_start : 1 product : sulfatase modifying factor 1 precursor protein_id : NP_666049.2

name	LOC100043718 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255394 GeneID:100043718
definition	codon_start : 1 product : similar to rat ribosomal protein L36 protein_id : XP_001480771.1

name	Itpr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754390 GeneID:16438 MGI:96623
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0005789 - endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005220 - inositol 1,4,5-triphosphate-sensitive calcium-release channel activity [Evidence IEA]; GO:0008095 - inositol-1,4,5-triphosphate receptor activity [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence ISS] [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : InsP3R type I; opisthotonus; InsP>3 product : inositol 1,4,5-triphosphate receptor 1 protein_id : NP_034715.1

name	Bhlhb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755680 CCDS:CCDS20400.1 GeneID:20893 MGI:1097714
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence TAS] [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : eip1 (E47 interaction protein 1); cytokine response gene 8 product : basic helix-loop-helix domain containing, class B2 protein_id : NP_035628.1

name	Arl8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385518 GeneID:67166 MGI:1914416
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : small G protein indispensable for equal chromosome segregation 1 product : ADP-ribosylation factor-like 10C protein_id : NP_080287.1

name	Edem1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27413906 CCDS:CCDS20402.1 GeneID:192193 MGI:2180139
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004559 - alpha-mannosidase activity [Evidence IDA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0004571 - mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [Evidence IEA] GO_process : GO:0030433 - ER-associated protein catabolism [Evidence IDA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : ER degradation enhancing alpha mannosidase-like; ER degradation ER degradation enhancer, mannosidase alpha-like 1 product : ER degradation enhancer, mannosidase alpha-like 1 protein_id : NP_619618.1

name	EG627371 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255259 GeneID:627371 MGI:3648518
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897119.3

name	LOC639110 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639110
definition	number : 1 pseudo : _no_value

name	LOC639110 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639110
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:125392
definition	standard_name : MHAa84g5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130900
definition	standard_name : D6Mit35

name	(CDS detail)
type	STS
link
xref	UniSTS:124389
definition	standard_name : 41.MHAa63d5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:185676
definition	standard_name : D45913

name	(CDS detail)
type	STS
link
xref	UniSTS:123844
definition	standard_name : 29.MHAa64g5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:116327
definition	standard_name : D6Mit105

name	(CDS detail)
type	STS
link
xref	UniSTS:124070
definition	standard_name : 34.MMHAP12FRD10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:159552
definition	standard_name : AI463102

name	(CDS detail)
type	STS
link
xref	UniSTS:179428
definition	standard_name : AI851573

name	(CDS detail)
type	STS
link
xref	UniSTS:123199
definition	standard_name : 14.MMHAP17FE2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124048
definition	standard_name : 33.MMHAP69FLC6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123615
definition	standard_name : 23.MMHAP7FLH2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:143635
definition	standard_name : Itpr1

name	(CDS detail)
type	STS
link
xref	UniSTS:235514
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224883
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:208007
definition	standard_name : AI267118

name	(CDS detail)
type	STS
link
xref	UniSTS:460154
definition	standard_name : stSG633507

name	(CDS detail)
type	STS
link
xref	UniSTS:225121
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:161801
definition	standard_name : RH124979

name	(CDS detail)
type	STS
link
xref	UniSTS:235516
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235515
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:212632
definition	standard_name : RH129325

name	(CDS detail)
type	STS
link
xref	UniSTS:142588
definition	standard_name : D6Mit344

name	(CDS detail)
type	STS
link
xref	UniSTS:224237
definition

name	LOC677205 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255395 GeneID:677205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 233 ESTs, 13 Proteins product : similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 pseudo : _no_value transcript_id : XR_034818.1

clone name	MSMg01-046M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530I16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-470I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545J20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-146D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080H15
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-234C22.b	B6Ng01-234C22.g
ACC	GA046018	GA046019
length	903	739
definition	B6Ng01-234C22.b	B6Ng01-234C22.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcacatctttcacaatccagagctcatgtcctctccatgagacaga catcgtatcataagagatttaggatgctgtgtctgtaactgcccagggag acacagtgagattggcagatgtagagatgaaaataagagactgtagcaag gctacacacaacctgtaatgtaacctcctgagaattaccataaaacactc tccttagggagtcaaactgaaaaaaaaaaatgtgttcctccagctaggga aaaaaaaatggcaacagtagcattttcaggcttaaccaattagagaatga ttcttcagtgatgcaaagtttatcaaactcaccactcatgcagagaccca caaaacctcatcacagtcaacagtgggccttgggctcttctcctgaagaa ctggcagtatcctgaatttctgctcaagtcacatgcagtgtgtacacaca cacacacacacacacacacacacactctcactctctctctctctctctct ctctctctctctctctctctctctctctgtctctgtctctctatatatat aaaaaaaagaacctgtgtgtgtgtgtatccctaactccaactttgataat gtgcttaccacattgcagtgctggtatatcccaccattttattttttctg tcatatagaggctggaccaggatgtctcggcttagacactaacttttcgt atatgacacaatgtatatctatgtttaactcctctttttagagtgacact actgcatgtctgttcttaatctttcatcacaggaggtgggggactggggc gagagaactttaatgctcgactgagagcgcggctcgcgctctgagagagg ggcgcaggaggactcaaagaaaaactatggaaaatatagaatctgatatt ctt	gaattctctgggaaggcatctgttcccacaccacagcagttatatatgca aggggaagagagccggcagagtactttcctatgggacgggggcagagtag atgatgctctacatatgtgccttctctctggctctgcagcacctccccag atcaggacacatctgtttcatacctaatgctatttgggttaacagatgtt aggaactggtccagtgtcatgtcacgcctgaatgccagagtcctgagggc tgaccctgtcctttcccaccatttgccctatagattgtcttaaacccctg gcctgagggttctgtaagggcatggcctttgtcactggcatagcttctaa ttgagactagacaaaatgttacttctctgttcttgaattctacctagctt ttattcagacttatttcaatgaaaagctaagaaggaaggaaaaaagaagg aagggagggagggagggagggaggcaggcaggcaggcaggcaggcaggca ggcaggcaggcaggcaggcaggctggctggctggctgccttggacccttt gttacaatgaatcttcagctgttcccaacactagctcaggaatatgcata atgtccacatgattgggacatgtttgtggagccattaagggtcttagccc aaggcagtgtaaccagtgtctgagcatttcaagttgggtgtgagctgaaa gtctctggttccttcagcctggggctccgagacacgact
quality values	Open. Hide. 58 41 46 35 62 38 22 46 47 62 62 62 62 62 31 32 42 39 49 62 62 44 37 62 59 62 62 62 59 59 59 62 59 49 38 50 56 40 48 38 59 62 54 54 62 59 62 59 62 59 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 59 59 62 62 59 62 62 59 59 62 62 54 49 42 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 59 59 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 59 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 54 62 62 62 62 59 49 59 56 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 40 59 48 49 56 59 62 62 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 62 44 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 38 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 49 58 58 58 58 58 58 58 58 58 58 58 58 49 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 49 58 58 52 52 54 53 54 31 39 35 42 40 42 34 40 36 39 9 17 28 16 19 12 16 13 21 14 21 9 16 14 16 12 16 9 15 13 16 9 9 10 14 15 12 11 9 9 12 13 9 7 11 14 10 17 9 10 19 8 7 10 10 10 10 9 6 9 9 13 15 16 12 17 20 10 23 21 16 12 6 6 10 9 12 9 11 6 6 9 9 6 10 12 10 7 10 13 9 10 10 10 15 11 6 9 12 6 6 12 10 6 6 12 7 7 7 11 8 11 6 10 11 6 9 17 20 19 19 9 21 12 9 6 10 9 9 6 11 15 9 6 11 6 19 11 11 12 11 16 15 23 16 18 11 14 8 16 6 12 10 29 30 15 9 16 18 13 13 6 13 18 9 11 11 10 15 6 5 6 9 6 9 5 23 6 19 19 15 6 13 17 16 12 12 19 28 17 24 6 12 16 22 11 9 6 9 6 15 12 31 13 11 6 11 6 9 7 12 6 15 12 14 6 10 14 6 8 10 9 5 11 11 15 12 15 14 13 32 15 10 18 6 7 16 10 6 5 9 11 6 6 9 6 10 15 7 16 13 23 12 5 11 10 10 5 9 16 13 9 13 8 12 9 16 7 18 18 13 10 12 11 9 11 19 6 18 26 29 13 11 6 7 7 6 18 8 23 6 11 10 24 8 12 11 10 8 9 16 9 8 18 10 25 8 6 5 9 7 10 6 11 5 6 7 11 5 8 14 10 7 12 17 13 10 10 10 10 29 19 20 16 6 13 13 16 10 9 16 27 6 16 21 9 10 7 6 13 6 6 17 14 10 10 7 6 6 6 5 6 6 13 15 8 9 8 13 6 5 5 13 17 4 5 11 16 10 5 6 7 5 11 6 6 5 4 5 10 19 5 5 4	Open. Hide. 62 47 42 47 62 62 62 62 62 62 56 56 31 38 25 37 38 56 59 59 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 59 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 54 59 62 62 62 59 54 62 62 62 62 62 62 62 59 59 59 59 62 59 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 59 59 62 62 59 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 47 62 62 49 47 46 46 49 54 62 62 47 32 31 21 20 20 24 20 17 10 27 21 14 16 34 42 30 24 52 28 21 14 40 19 15 18 52 38 34 24 47 35 38 30 52 38 52 42 62 47 48 47 62 43 43 27 31 17 23 25 34 21 41 34 34 25 42 47 40 21 39 31 43 34 54 54 54 54 58 52 52 28 41 33 24 40 38 47 54 53 53 52 35 34 26 41 42 52 39 39 54 52 54 54 54 42 50 48 58 54 49 39 52 52 38 23 52 45 22 32 30 25 12 28 37 50 51 34 51 51 50 50 50 52 49 54 51 54 40 49 44 58 19 25 32 32 40 32 35 32 51 40 50 48 40 41 51 35 34 46 51 48 33 42 43 50 30 26 42 28 32 32 24 40 17 13 24 19 50 33 35 26 17 13 22 19 29 19 13 26 23 9 40 18 28 23 20 32 31 37 33 41 53 53 50 18 32 50 53 53 31 49 22 40 26 32 19 22 27 21 21 24 16 22 50 40 23 14 32 20 30 41 14 24 16 12 31 16 20 21 25 18 33 37 33 17 14 16 12 17 15 12 18 16 19 9 23 29 19 14 13 10 19 21 25 13 15 9 22 8 21 11 6 8 6 17 16 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_108198003_108198737
seq2: B6Ng01-234C22.g_66_803

seq1  GAATTCTCTGGGAAGGCATCTGTTCCCACACCACAGCAGTTATATATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGGAAGGCATCTGTTCCCACACCACAGCAGTTATATATGCA  50

seq1  AGGGGAAGAGAGCCGGCAGAGTACTTTCCTATGGGACGGGGGCAGAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAGAGAGCCGGCAGAGTACTTTCCTATGGGACGGGGGCAGAGTAG  100

seq1  ATGATGCTCTACATATGTGCCTTCTCTCTGGCTCTGCAGCACCTCCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCTCTACATATGTGCCTTCTCTCTGGCTCTGCAGCACCTCCCCAG  150

seq1  ATCAGGACACATCTGTTTCATACCTAATGCTATTTGGGTTAACAGATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGACACATCTGTTTCATACCTAATGCTATTTGGGTTAACAGATGTT  200

seq1  AGGAACTGGTCCAGTGTCATGTCACGCCTGAATGCCAGAGTCCTGAGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTGGTCCAGTGTCATGTCACGCCTGAATGCCAGAGTCCTGAGGGC  250

seq1  TGACCCTGTCCTTTCCCACCATTTGCCCTATAGATTGTCTTAAACCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTGTCCTTTCCCACCATTTGCCCTATAGATTGTCTTAAACCCCTG  300

seq1  GCCTGAGGGTTCTGTAAGGGCATGGCCTTTGTCACTGGCATAGCTTCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGGGTTCTGTAAGGGCATGGCCTTTGTCACTGGCATAGCTTCTAA  350

seq1  TTGAGACTAGACAAAATGTTACTTCTCTGTTCTTGAATTCTACCTAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACTAGACAAAATGTTACTTCTCTGTTCTTGAATTCTACCTAGCTT  400

seq1  TTATTCAGACTTATTTCAATGAAAAGCTAAGAAGGAAGGAAAAAAGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAGACTTATTTCAATGAAAAGCTAAGAAGGAAGGAAAAAAGAAGG  450

seq1  AAGGGAGGGAGGGAGGGAGGGAGGCAGGCAGGCAGGCAGGCAGGCAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGGAGGGAGGGAGGGAGGCAGGCAGGCAGGCAGGCAGGCAGGCA  500

seq1  GGCAGGCAGGCAGGCAGGCAGGCTGGCTGGCTGGCTGCCTTGGACCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCAGGCAGGCAGGCAGGCTGGCTGGCTGGCTGCCTTGGACCCTTT  550

seq1  GTTACAATGAATCTTCAGCTGTTCCCAACACTAGCTCAGGAATATGCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAATGAATCTTCAGCTGTTCCCAACACTAGCTCAGGAATATGCATA  600

seq1  ATGTCCACATGATTGGGACATGTTTGTGGAGCCATTAAGGGTC-TAGCCC  649
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATGTCCACATGATTGGGACATGTTTGTGGAGCCATTAAGGGTCTTAGCCC  650

seq1  AAGGCAGTGTAACCAGTGTCTGAGCATTTCAAGTTGGGTGTGAGCTGAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGTGTAACCAGTGTCTGAGCATTTCAAGTTGGGTGTGAGCTGAAA  700

seq1  GTCTCTGGTTCC-TCAGCCT-GGGCTCCGAGACACGAC  735
      |||||||||||| ||||||| |||||||||||||||||
seq2  GTCTCTGGTTCCTTCAGCCTGGGGCTCCGAGACACGAC  738

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information