BAC Information

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BAC

Clone NameB6Ng01-235O11
Chromosome6 (Build37)
Map Location 74,573,269 - 74,574,432
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235O11.bB6Ng01-235O11.g
ACCGA047263GA047264
length1,1751,223
definitionB6Ng01-235O11.b B6Ng01-235O11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactagagaaaactaactttccatgtgcaagaagttaattgttg
ataggttttggatagggttggagcttttctacttcttctgcttagtgctg
ggaccttatcttccttgaagctgtgcaggcccagtgtgtgctaccacagt
cctgtgaactcttatttgtgttagtcctgttgtgtcctaaagactgacat
ggctgtctgagccctgaaaattggatgtaggggtgaagatgtactactta
gggttaaatgttctcatggctctcactctctgcatattgtccaagcgtgt
gttagttcctatcttctgtaaaatgaagcctcagaggatggcttgtgtga
gtgactgacctaagggtatagcaatatcttctcaagaatcatttaactac
gatgttcctctagcagaatgatgagaattggttttccaggcccacagctt
atcaagtctcaggttcttggcaactggagtagtatcgagtattttaatgg
tcacttgtcacgatttgtagataatggagtttagacaaaagattccaagg
taacaatttacaggaataataacaaatttaagagacaaaggcatgtgagg
caggggcagggagtttgacagcacaacacaaataaggaaacagctacaga
atcctgctttcccagaagccacatcagtactaggaaccccaggaaagaca
tcaaccactgtccactaatacttcttagagcctgcctagttaattcccca
gcattcccttcccttgaatccagaacccattccacaactaaggattccat
aaaccaatttcttaacaaatacaaaaaaaaataaaatagcccccctgtat
tttatcagaacactataaactaaagctggatttcaacaagacaaacaaca
gaaaagcctacaaacacatttttctactgaatgacaactgagacaagggc
aatataaagaaagaaattaaaaacttcatagaatgtaataaaaaaaaatg
aaagtacacattacccaaatgctttcattaaataataactaagagattgt
tcctcatagttactaacttattgtaccacctaaacctctctaagagaaca
aagttaccaccaccacaccacccacctatagagtagagagtaagttatat
cgtacttaagtctggaaattcataa
gaattcagacatgaggaataacgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcattaggaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccttgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtcaggaggttcctcag
aaaactggacatagtactaccagaagatcctgcaatacctctcctgggca
tatatccagaagatgtcccaaccagtaagaaggacacatactccactatg
ttcatagcagccttatttataatagccagaatctggaaagatcccagatg
ccccttaacagaggaatggatacgaaaaatgtggtatttttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaag
gaattcacagaatatgtactcactgatgagtgggtattagctcagaatct
taggctacccaagatataagatacaatttgctaaacgcatgaaactcaag
aagtacaaagaccaaagtgtggacactttgccccttcttagaattgggaa
caaaacacccatggaaggagttacagagacaaagttttgagctgtgacaa
aaggatggaccatctagacactgccatatccagggatccatcccataaat
cagcttccaaatgctgacaccattgcatacactagcaagatttttcttga
aaggtcccagatatagctgtctcttgtgagactatgctggggcctagcaa
acacagaagtggatgctcacagtaagctatttggatggatcaccactgcc
ccagtggaggagctaagaagagagtaccaaaggagtctaaagggattctg
caatcatataggtggaacacaatatgaactaaccagtaaccccccctgga
gcttcatgttctctagctggcatatgattcaagaaactgacccttatttg
gccatcttggcaaagagaggcccaatagtcctgaaaaactttaatattgc
cttcagtcaaggtatcgacacggatcaaaaaatgagatgtctcttgtagt
tgcgagagtgatgtactatcacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74573269_74574432
seq2: B6Ng01-235O11.b_50_1224 (reverse)

seq1  TTATGGATTT-CAGACTTAAGTATGATTATAACTTACTCTCTACTCCTAT  49
      ||||| |||| |||||||||||| || |||||||||||||||||| ||||
seq2  TTATGAATTTCCAGACTTAAGTACGA-TATAACTTACTCTCTACT-CTAT  48

seq1  AGGTGTGT-GTGTG--TGTGTTACTTTTGTTC---TAGAG-GTTTTAGGT  92
      ||||| || |||||   ||| ||  |||||||   ||||| | |||||||
seq2  AGGTGGGTGGTGTGGTGGTGGTAACTTTGTTCTCTTAGAGAGGTTTAGGT  98

seq1  -GTACAATTAAGTTAGT-ACTATGAG--AC-ATCTCTAGTTTATTTATT-  136
       |||||| ||||||||| ||||||||  || |||||    ||| ||||| 
seq2  GGTACAA-TAAGTTAGTAACTATGAGGAACAATCTC----TTAGTTATTA  143

seq1  TTTAATGAAAGCATTTGGGTATGTTGTACTTTCA-TTTTTTTTATTACAT  185
      |||||||||||||||||||||   |||||||||| |||||||||||||||
seq2  TTTAATGAAAGCATTTGGGTAATGTGTACTTTCATTTTTTTTTATTACAT  193

seq1  TCTATGAAGTTTTTAATTTCTTTCTTTATATTGCCCTTGTCTCAGTTGTC  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAAGTTTTTAATTTCTTTCTTTATATTGCCCTTGTCTCAGTTGTC  243

seq1  ATTCAGTAG-AAAATGTGTTTGTAGGC-TTTCTGTTGTTTGTCTTGTTGA  283
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  ATTCAGTAGAAAAATGTGTTTGTAGGCTTTTCTGTTGTTTGTCTTGTTGA  293

seq1  AATCCAGCTTTAGTTTATAGTGTTCTGATAAAATACAGGGGGGCTATTTT  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGCTTTAGTTTATAGTGTTCTGATAAAATACAGGGGGGCTATTTT  343

seq1  A-TTTTTTTTGTATTTGTTAAGAAATTGGTTTATGGAATCCTTAGTTGTG  382
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTGTATTTGTTAAGAAATTGGTTTATGGAATCCTTAGTTGTG  393

seq1  GAATGGGTTCTGGATTCAAGGGAAGGGAATGCTGGGGAATTAACTAGGCA  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGTTCTGGATTCAAGGGAAGGGAATGCTGGGGAATTAACTAGGCA  443

seq1  GGCTCTAAGAAGTATTAGTGGACAGTGGTTGATGTCTTTCCTGGGGTTCC  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAAGAAGTATTAGTGGACAGTGGTTGATGTCTTTCCTGGGGTTCC  493

seq1  TAGTACTGATGTGGCTTCTGGGAAAGCAGGATTCTGTAGCTGTTTCCTTA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTGATGTGGCTTCTGGGAAAGCAGGATTCTGTAGCTGTTTCCTTA  543

seq1  TTTGTGTTGTGCTGTCAAACTCCCTGCCCCTGCCTCACATGCCTTTGTCT  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTTGTGCTGTCAAACTCCCTGCCCCTGCCTCACATGCCTTTGTCT  593

seq1  CTTAAATTTGTTATTATTCCTGTAAATTGTTACCTTGGAATCTTTTGTCT  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATTTGTTATTATTCCTGTAAATTGTTACCTTGGAATCTTTTGTCT  643

seq1  AAACTCCATTATCTACAAATCGTGACAAGTGACCATTAAAATACTCGATA  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCATTATCTACAAATCGTGACAAGTGACCATTAAAATACTCGATA  693

seq1  CTACTCCAGTTGCCAAGAACCTGAGACTTGATAAGCTGTGGGCCTGGAAA  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCCAGTTGCCAAGAACCTGAGACTTGATAAGCTGTGGGCCTGGAAA  743

seq1  ACCAATTCTCATCATTCTGCTAGAGGAACATCGTAGTTAAATGATTCTTG  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTCTCATCATTCTGCTAGAGGAACATCGTAGTTAAATGATTCTTG  793

seq1  AGAAGATATTGCTATACCCTTAGGTCAGTCACTCACACAAGCCATCCTCT  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATATTGCTATACCCTTAGGTCAGTCACTCACACAAGCCATCCTCT  843

seq1  GAGGCTTCATTTTACAGAAGATAGGAACTAACACACGCTTGGACAATATG  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTCATTTTACAGAAGATAGGAACTAACACACGCTTGGACAATATG  893

seq1  CAGAGAGTGAGAGCCATGAGAACATTTAACCCTAAGTAGTACATCTTCAC  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTGAGAGCCATGAGAACATTTAACCCTAAGTAGTACATCTTCAC  943

seq1  CCCTACATCCAATTTTCAGGGCTCAGACAGCCATGTCAGTCTTTAGGACA  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACATCCAATTTTCAGGGCTCAGACAGCCATGTCAGTCTTTAGGACA  993

seq1  CAACAGGACTAACACAAATAAGAGTTCACAGGACTGTGGTAGCACACACT  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGACTAACACAAATAAGAGTTCACAGGACTGTGGTAGCACACACT  1043

seq1  GGGCCTGCACAGCTTCAAGGAAGATAAGGTCCCAGCACTAAGCAGAAGAA  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGCACAGCTTCAAGGAAGATAAGGTCCCAGCACTAAGCAGAAGAA  1093

seq1  GTAGAAAAGCTCCAACCCTATCCAAAACCTATCAACAATTAACTTCTTGC  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAAGCTCCAACCCTATCCAAAACCTATCAACAATTAACTTCTTGC  1143

seq1  ACATGGAAAGTTAGTTTTCTCTAGTAGAATTC  1164
      ||||||||||||||||||||||||||||||||
seq2  ACATGGAAAGTTAGTTTTCTCTAGTAGAATTC  1175