BAC Information

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BAC

Clone NameB6Ng01-236O23
Chromosome6 (Build37)
Map Location 45,750,937 - 45,751,835
singlet/doubletsinglet
Overlap geneCntnap2
Upstream geneLOC100040210
Downstream geneRbpsuh-rs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236O23.bB6Ng01-236O23.g
ACCGA048030GA048031
length592900
definitionB6Ng01-236O23.b B6Ng01-236O23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatttagactagtccaaacatcacgtgtcctctgtgggtcttgc
aagcaggtgtgtctgtttcagcagtttgtctcagttgacatcactctgcc
aattggcctgagtccctggaaggagcaagaaactgcagcacaccaccaga
agttttttggtgcatttctgtctatgagtttccaacaaatgtactttaac
tatgtaatgtaaggtggggcaaaatatgcatgtcattaatgaagaatctt
ttatcatgtgtccttttatgcatttgttttagtagaataatcatgtgtgt
gtgtgttttagtgaaatatttttatttatttatttatttatttattttta
attaggtatttatttcatttacatttccaatgctatcccaaaagtccccc
acatgctcccctacccactccccctccaacccactcccacttcttggccc
tggtgttcccctgtactgaggcatataaagtttgcatggccaatgggcct
ctctttccagtgatggcccactaggccatcttctgatacatatacagcta
gagacacgagctccgggttgggggggggggtaactggttagt

gaattcttttattttttattttatattttgagatgaagactatatatatt
gaggtacaggttttgataggtagcctagacgatattaactactcaaattg
ccactatgcataacttgttgggtaggtccttaaaaagtgtctgatatttt
ccctatagtagatgattgaaagaaaactaagcaatacaaaaatattgaat
tttttaaaaatgcactgctacatgagaaattacaggaatgtgtggttgac
agcatagaaaactgttctccatcattttttgagtaagcatacatgatgtc
aaaagggctttgaagtcgtacaaatcagtgctcaaattctagctctgaca
ctttccatccctctgatctgggagaagttgcttaatcttaaaagctaaat
tctcttctgtataattagaataataaaattgcttctttcatgtggtgctt
gtgaggatttaaagaggtgatgcttagcaaagggtctggtgcatcaggtt
ctataaatgtgaagcccagcagactctactgatggctcacgagtgccagg
tgtctgacttttgttccccttacctgtataaaaagtttaccgtgtaagga
acactgaaatgtacagtacagcaacttcaccatgccagaattcacatcct
taaaacctgactgatctccgtggggaacaaatacagagaagtggctctct
gtattctttctattaaaactgtatcttacactttaccacaggttgtccag
acacaccatgtttacgtggtggacctaaactaatggtcatcctcctgcct
tttatccctcagtgttattacactcataaaacatttggcaataaaacatc
ttttaaatgttttacatttatttacagtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_45750937_45751835
seq2: B6Ng01-236O23.g_67_966

seq1  GAATTCTTTTATTTTTTATTTTATATTTTGAGATGAAGACTATATATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATTTTTTATTTTATATTTTGAGATGAAGACTATATATATT  50

seq1  GAGGTACAGGTTTTGATAGGTAGCCTAGACGATATTAACTACTCAAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACAGGTTTTGATAGGTAGCCTAGACGATATTAACTACTCAAATTG  100

seq1  CCACTATGCATAACTTGTTGGGTAGGTCCTTAAAAAGTGTCTGATATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATGCATAACTTGTTGGGTAGGTCCTTAAAAAGTGTCTGATATTTT  150

seq1  CCCTATAGTAGATGATTGAAAGAAAACTAAGCAATACAAAAATATTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATAGTAGATGATTGAAAGAAAACTAAGCAATACAAAAATATTGAAT  200

seq1  TTTTTAAAAATGCACTGCTACATGAGAAATTACAGGAATGTGTGGTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAATGCACTGCTACATGAGAAATTACAGGAATGTGTGGTTGAC  250

seq1  AGCATAGAAAACTGTTCTCCATCATTTTTTGAGTAAGCATACATGATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGAAAACTGTTCTCCATCATTTTTTGAGTAAGCATACATGATGTC  300

seq1  AAAAGGGCTTTGAAGTCGTACAAATCAGTGCTCAAATTCTAGCTCTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGCTTTGAAGTCGTACAAATCAGTGCTCAAATTCTAGCTCTGACA  350

seq1  CTTTCCATCCCTCTGATCTGGGAGAAGTTGCTTAATCTTAAAAGCTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATCCCTCTGATCTGGGAGAAGTTGCTTAATCTTAAAAGCTAAAT  400

seq1  TCTCTTCTGTATAATTAGAATAATAAAATTGCTTCTTTCATGTGGTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTGTATAATTAGAATAATAAAATTGCTTCTTTCATGTGGTGCTT  450

seq1  GTGAGGATTTAAAGAGGTGATGCTTAGCAAAGGGTCTGGTGCATCAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGATTTAAAGAGGTGATGCTTAGCAAAGGGTCTGGTGCATCAGGTT  500

seq1  CTATAAATGTGAAGCCCAGCAGACTCTACTGATGGCTCACGAGTGCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAATGTGAAGCCCAGCAGACTCTACTGATGGCTCACGAGTGCCAGG  550

seq1  TGTCTGACTTTTGTTCCCCTTACCTGTATAAAAAGTTTACCGTGTAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGACTTTTGTTCCCCTTACCTGTATAAAAAGTTTACCGTGTAAGGA  600

seq1  ACACTGAAATGTACAGTACAGCAACTTCACCATGCCAGAATTCACATCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAAATGTACAGTACAGCAACTTCACCATGCCAGAATTCACATCCT  650

seq1  TAAAACCTGACTGATCTCCGTGGGGAACAAATACAGAGAAGTGGCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCTGACTGATCTCCGTGGGGAACAAATACAGAGAAGTGGCTCTCT  700

seq1  GTATTCTTTCTATTAAAACTGTATCTTACACTTTACCACAGGTTGTCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTTTCTATTAAAACTGTATCTTACACTTTACCACAGGTTGTCCAG  750

seq1  ACACACCATGTTTACGTGGTGGACCTAAACTAATGGTCATCCTCCTGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCATGTTTACGTGGTGGACCTAAACTAATGGTCATCCTCCTGCCT  800

seq1  TTTATCCCTCAGTGTTATTACACTCATAAAACATTTGGCAATAAAACATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCCTCAGTGTTATTACACTCATAAAACATTTGGCAATAAAACATC  850

seq1  -TTTAAATGTTTTACATTTATTTACAGTGTGTGTGTGTGTGTGTGTGTGT  899
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATGTTTTACATTTATTTACAGTGTGTGTGTGTGTGTGTGTGTGT  900


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