BAC Information

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BAC

Clone NameB6Ng01-237H11
Chromosome6 (Build37)
Map Location 59,904,046 - 59,904,796
singlet/doubletsinglet
Overlap genenone
Upstream geneD430015B01Rik, Tigd2, Gprin3, EG634166, EG627108
Downstream geneEG434019, LOC671300, EG627178, LOC100041706, LOC100041717, A530053G22Rik, LOC667066, LOC100041726, Snca, ENSMUSG00000064018, Mmrn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237H11.bB6Ng01-237H11.g
ACCGA048417GA048418
length9871,139
definitionB6Ng01-237H11.b B6Ng01-237H11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggggtcttctcagggtgggtataaatgctaggttctttagagg
cattgtttgctgatgatcatttctgttagtcctgagtcttggttattcag
tttgatacattgaggtctggtaattgtattgctcaaaaattcaacaagaa
aaaaaggaattagatataagattcaggactctctctctctgagaggcagc
aggcaactgatctgatccttgtctaatctcacatactttgttcaaatttg
tgggttcttttgcagctctcttgagatctgccaatggattttgttggtag
accttcatgtctcccttacattctgtcttattatagttctagtcaggtct
aactaggagaaaccctctgtcaaaaacagcctggttaatcaatggtatac
ccttgtctaaggggacattctttctttctctctgcattattctctctagc
tctttgttcatgaagagcattctcatgagttgttggatattctccctttt
ttgggctgatgctagagaggccatgggctcaagcatagggggatatggag
gaggaggttcttggatctaggaagattgacttattctcaggtatgtatcc
ctcctcctgtgtttccttttttctgtcagccagaacctgtaaagtgggta
atggggaaaaaggccgttatccatgagatggggagggtcctccactagat
ttttttcacgtaactatatagagctcttggtggacactcaggggtcttct
tgcatcccagaatcccccaaatgtaagaacctgaccctggggcagtcaga
ctttactttgaaatgtctccaagtgtgacagggagatgcagatagatgca
aaagcaagagttttttttttcccataaggtcagggtcaaccctcaaccag
taccactaggcaaaggaaaagaagacacccaattttacacatacttttaa
gatacctaggtacaacacttaaagaagaagtaaacct
gaattctcattacagacatgaatggaagccagtccatggcaggaaatcat
gaagattaataggccattgggcccaagtaaggatgcttcaatcccactag
ggaggtaaaggaatccagagggccaattaagggagggaactgagtgggag
agtggaagaggatgggttgggaagcaaagcaggagacatagagctgaaat
aatatctgagagttttagaataacatactgattcacactgtgtatgtatg
caagctagagagatagacaaaaagggatatacacatacagagagacagag
agtgagaaagagacagagagaggaacagagagaaaggctgaaatacagag
agacaaacagagacagagagacagaaacagacagagacagaaagacaaag
agagcctagtctgatatgagactcaaacctcatcctcagtgacacatttc
ttctaacaaagacatttatataccaacaatgtcactcctagtcttatcaa
aaattccactccctgatgagtaagcattcaaatatagtaacacatagggg
ccattcttatctgaaccaccacatttgcattagctgaaatatatcatttt
ctttcttttatttgtcttttatctttcttccatttattaatttaatcttt
tttttttttacagttcagattttaactccctccaaatccaccttctgact
cttccacctcacacacctcctcctcctctgcatctctaagaggatgtacc
caccccacacaccccaccccactagccctcctcacacccttgggcatcca
gtttcttgagggtttatttgcatcttctctgactgagtccagacctggca
accctttgctgtatatgtgccttcatatcaactaaagtaagctgcctgaa
tagtggcacagtgtctgagagatcttgggggtccaggtagtgatgatgct
agatacagaaagtatggttcaattttcacaatggagtaccactcagctat
agacgagacattatgagttgcagcatgtattgaatatctgatgagcaact
cgaatccaaagactgctgagttattcactaattgtattgaagaaaatcaa
cgaacgagatttcctaaatactctcgcatataaagtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_59904046_59904796
seq2: B6Ng01-237H11.b_284_1036

seq1  ACTTTGTTCAAATTTGTGGGTTCTTTTGCAGCTCTCTTGAGATCTGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTTCAAATTTGTGGGTTCTTTTGCAGCTCTCTTGAGATCTGCCAA  50

seq1  TGGATTTTGTTGGTAGACCTTCATGTCTCCCTTACATTCTGTCTTATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTTGTTGGTAGACCTTCATGTCTCCCTTACATTCTGTCTTATTAT  100

seq1  AGTTCTAGTCAGGTCTAACTAGGAGAAACCCTCTGTCAAAAACAGCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAGTCAGGTCTAACTAGGAGAAACCCTCTGTCAAAAACAGCCTGG  150

seq1  TTAATCAATGGTATACCCTTGTCTAAGGGGACATTCTTTCTTTCTCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAATGGTATACCCTTGTCTAAGGGGACATTCTTTCTTTCTCTCTG  200

seq1  CATTATTCTCTCTAGCTCTTTGTTCATGAAGAGCATTCTCATGAGTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTCTCTCTAGCTCTTTGTTCATGAAGAGCATTCTCATGAGTTGTT  250

seq1  GGATATTCTCCCTTTTTTGGGCTGATGCTAGAGAGGCCATGGGCTCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTCTCCCTTTTTTGGGCTGATGCTAGAGAGGCCATGGGCTCAAGC  300

seq1  ATAGGGGGATATGGAGGAGGAGGTTCTTGGATCTAGGAAGATTGACTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGGATATGGAGGAGGAGGTTCTTGGATCTAGGAAGATTGACTTAT  350

seq1  TCTCAGGTATGTATCCCTCCTCCTGTGTTTCCTTTTTTCTGTCAGCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGTATGTATCCCTCCTCCTGTGTTTCCTTTTTTCTGTCAGCCAGA  400

seq1  ACCTGTAAAGTGGGTAATGGGGAAAAAGGCCGTTATCCATGAGATGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAAAGTGGGTAATGGGGAAAAAGGCCGTTATCCATGAGATGGGGA  450

seq1  GGGTCCTCCACTAGATTTTTTTCAGGTAACTATATAGAGCTCTTGGTGGA  500
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGGTCCTCCACTAGATTTTTTTCACGTAACTATATAGAGCTCTTGGTGGA  500

seq1  CACTCAGGGGTCTTCTTGCATCCCAGAATCCCCCAAATGTAAGAACCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGGGTCTTCTTGCATCCCAGAATCCCCCAAATGTAAGAACCTGA  550

seq1  CCCTGGGGCAGTCAGAC-TTACTTTGAAATGTCTCCAAGTGTGACAGGGA  599
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCCTGGGGCAGTCAGACTTTACTTTGAAATGTCTCCAAGTGTGACAGGGA  600

seq1  GATGCAGATAGATGCAAAAGCAAGAG-TTTTTTTTTCCCATAAGGTCAGG  648
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GATGCAGATAGATGCAAAAGCAAGAGTTTTTTTTTTCCCATAAGGTCAGG  650

seq1  GTCAACCCTCAACCAGTACCACTAGGCAAAGGAAAAG-AGACACCCAATT  697
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTCAACCCTCAACCAGTACCACTAGGCAAAGGAAAAGAAGACACCCAATT  700

seq1  TAACACATACTTTTAAGAATACCTAGGTACAACACCTTAAAG-AGAAGTA  746
      | ||||||||||||||| |||||||||||||||| ||||||| |||||||
seq2  TTACACATACTTTTAAG-ATACCTAGGTACAACA-CTTAAAGAAGAAGTA  748

seq1  AAACT  751
      || ||
seq2  AACCT  753