BAC Information

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BAC

Clone NameB6Ng01-237L07
Chromosome6 (Build37)
Map Location 63,099,737 - 63,252,241
singlet/doubletdoublet
Overlap geneLOC667099, Grid2
Upstream geneC130092O11Rik, GA_x5J8B7W6GG0-4757855-4757501
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237L07.bB6Ng01-237L07.g
ACCGA048590GA048591
length1,1541,083
definitionB6Ng01-237L07.b B6Ng01-237L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,251,096 - 63,252,241)(63,099,737 - 63,100,814)
sequence
gaattctcttttttattgtatttcaagttcataaaataactattatcttg
aattgtcccttgaactaaatctattgttgttttcttttattattaacaag
agactattgtttcaatgttttagacttgtatttcagcacagaatcaaagt
gacaaacagaaattagatctttgtctctttgagctgctcctctcaggatg
ttttaaatcaattattcaaattttgttgataatggcaacattggggacaa
aggccacagagagctgactcagctctcccagggaagaacagatgagagag
tctctgagtgatcactattcaccaggaggtacactggcaaagggaacatc
tccttacaagttctgactttatctttagacaaattcaatccaatggaaat
ataaatattctatagcattgataaatcagtgcaccaaactcttgggcaca
ctatttcatcaaacatatactaataagtataaactttacttatataaata
agacatagtttagcaccaacccaataagagttaattaacacttcagtttc
tctaatagttaggccaactggacaaaaaaaaaaattaaaagagaaacctc
aggattaaatggtatcttacatttaatagacctaatatctgcataatata
aaagacagacacacacacacatactctacagagcagcacatggaagtttc
tctaaagtatacttaatgctgggacacaacacaaaccttaacaaatacag
ggaaaaaatgcgtgaaaaaacatagaatgggaagaaaatcttgatcatct
atgcatctaataagagacaatatccagaatttacaaagtttatattttcc
tatatattctatatgactatttaattatattgagggattggcattccagg
catcaagatatattgtatcgctattattaataaaaaaaaaaaatggtgcc
agcaaaaaaaaaaaaaaaaagaagtccctgtataccactagaatagaaga
cacaaatatgagtacgtatagctacagatgacttataaaaaacaaacact
gtagaaaatacagcatcttcaaaaactgatgctgaaaaacctgtattgtc
cacatgactattgaattggacacatattctgttaggtgtacaaacttaga
ctca
gaattcactttggccatgaaatcaaagtagacatgattataagttacagt
catttaaaccactaaattttagaaatgtatccctatccaataaatcctta
cattatcaagatactaaaatgtttgtctatgtttctgccatagcatactg
atgagaaatgccaagtctactatgtcacctaagatattatcaaactttag
ccttttcacatgacaaacattttccaggccctaaaggagaagggaatttt
cacacaaggcctgtttttttttttttttttttttttttttttaatctgca
tattgacttgtctttttttccttttgaacatcttcaagacaacataaaaa
ttataagcctcacaatttttcatccaataggtttatacatacatagaaaa
ttactatttaaataattgcatattatttaaaaactaaaaatatttttgtg
aaatttcattattcatagaaattgtgtgatcattaactcaattaatattt
taattaataagttatcttgtatagtataaatcttaaagtaactgtggtaa
cttaatcatcgtatggcaaattagtaagcaaaaatctagaaatctagaat
cacttatgtttttatgttggactgatgaaatttcatgttagcatgccttt
ggcatctcataaagagaaccctgaattagtagctgagcagctgaccctat
cgttacccagagtaacttccaatttgctttcttgttagaaggattcattc
ctaaatataaataatctcccaattcatgctaggcctactagatgctactt
tgttcaggatgattttatgaaaatatgtttaaataattatattagacttg
ttgtcctaatatttcatcctagctaggtgataagatacatgcagataaag
ggatttcaagttcctgtctcttcaagtaatttcctgtatagaaattgcac
atttatacagtaaaagaacatcacatctctccactaggatgttagaggat
gcagtcacagtagtcttatcactttgtggtttacaacaaaaaatagatca
gagcttaggttctttataactatggttctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_63251096_63252241
seq2: B6Ng01-237L07.b_46_1199 (reverse)

seq1  TGAGTCTAGTTTTGTACAAACTAACAG-ATATGTGTCAAATTTCATTAGT  49
      ||||||||  ||||||| | ||||||| ||||||||| || |||| ||||
seq2  TGAGTCTAAGTTTGTAC-ACCTAACAGAATATGTGTCCAA-TTCAATAGT  48

seq1  CATGTGGAC-ATACA-GTTTTCCAGCATCAGTTTTTGAAGATGCTGTATT  97
      ||||||||| ||||| ||||| ||||||||||||||||||||||||||||
seq2  CATGTGGACAATACAGGTTTTTCAGCATCAGTTTTTGAAGATGCTGTATT  98

seq1  TTCTACAGTGTTTG-TTTTTATAAGTCATCTGTAGCTATACGTACTCATA  146
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCTACAGTGTTTGTTTTTTATAAGTCATCTGTAGCTATACGTACTCATA  148

seq1  TTTGTGTCTTCTATTCTAGTGGTATACAGG----ACTCTTTTTTTTTTTT  192
      ||||||||||||||||||||||||||||||     || ||||||||||||
seq2  TTTGTGTCTTCTATTCTAGTGGTATACAGGGACTTCTTTTTTTTTTTTTT  198

seq1  TTTGCTGGCACCA-TTTTTTTTTTTATTAAT-ATAGCGATACAATATATC  240
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  TTTGCTGGCACCATTTTTTTTTTTTATTAATAATAGCGATACAATATATC  248

seq1  TTGATGCCTGGAATGCCAATCCCTCAATATAATTAAATAGTCATATAGAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCCTGGAATGCCAATCCCTCAATATAATTAAATAGTCATATAGAA  298

seq1  TATATAGGAAAATATAAACTTTGTAAATTCTGGATATTGTCTCTTATTAG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGGAAAATATAAACTTTGTAAATTCTGGATATTGTCTCTTATTAG  348

seq1  ATGCATAGATGATCAAGATTTTCTTCCCATTCTATGTTTTTTCACGCATT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAGATGATCAAGATTTTCTTCCCATTCTATGTTTTTTCACGCATT  398

seq1  TTTTCCCTGTATTTGTTAAGGTTTGTGTTGTGTCCCAGCATTAAGTATAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTGTATTTGTTAAGGTTTGTGTTGTGTCCCAGCATTAAGTATAC  448

seq1  TTTAGAGAAACTTCCATGTGCTGCTCTGTAGAGTATGTGTGTGTGTGTCT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGAAACTTCCATGTGCTGCTCTGTAGAGTATGTGTGTGTGTGTCT  498

seq1  GTCTTTTATATTATGCAGATATTAGGTCTATTAAATGTAAGATACCATTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTATATTATGCAGATATTAGGTCTATTAAATGTAAGATACCATTT  548

seq1  AATCCTGAGGTTTCTCTTTTAATTTTTTTTTTTGTCCAGTTGGCCTAACT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGAGGTTTCTCTTTTAATTTTTTTTTTTGTCCAGTTGGCCTAACT  598

seq1  ATTAGAGAAACTGAAGTGTTAATTAACTCTTATTGGGTTGGTGCTAAACT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGAAACTGAAGTGTTAATTAACTCTTATTGGGTTGGTGCTAAACT  648

seq1  ATGTCTTATTTATATAAGTAAAGTTTATACTTATTAGTATATGTTTGATG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTATTTATATAAGTAAAGTTTATACTTATTAGTATATGTTTGATG  698

seq1  AAATAGTGTGCCCAAGAGTTTGGTGCACTGATTTATCAATGCTATAGAAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGTGCCCAAGAGTTTGGTGCACTGATTTATCAATGCTATAGAAT  748

seq1  ATTTATATTTCCATTGGATTGAATTTGTCTAAAGATAAAGTCAGAACTTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATTTCCATTGGATTGAATTTGTCTAAAGATAAAGTCAGAACTTG  798

seq1  TAAGGAGATGTTCCCTTTGCCAGTGTACCTCCTGGTGAATAGTGATCACT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGATGTTCCCTTTGCCAGTGTACCTCCTGGTGAATAGTGATCACT  848

seq1  CAGAGACTCTCTCATCTGTTCTTCCCTGGGAGAGCTGAGTCAGCTCTCTG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTCTCTCATCTGTTCTTCCCTGGGAGAGCTGAGTCAGCTCTCTG  898

seq1  TGGCCTTTGTCCCCAATGTTGCCATTATCAACAAAATTTGAATAATTGAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTTGTCCCCAATGTTGCCATTATCAACAAAATTTGAATAATTGAT  948

seq1  TTAAAACATCCTGAGAGGAGCAGCTCAAAGAGACAAAGATCTAATTTCTG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATCCTGAGAGGAGCAGCTCAAAGAGACAAAGATCTAATTTCTG  998

seq1  TTTGTCACTTTGATTCTGTGCTGAAATACAAGTCTAAAACATTGAAACAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACTTTGATTCTGTGCTGAAATACAAGTCTAAAACATTGAAACAA  1048

seq1  TAGTCTCTTGTTAATAATAAAAGAAAACAACAATAGATTTAGTTCAAGGG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCTTGTTAATAATAAAAGAAAACAACAATAGATTTAGTTCAAGGG  1098

seq1  ACAATTCAAGATAATAGTTATTTTATGAACTTGAAATACAATAAAAAAGA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCAAGATAATAGTTATTTTATGAACTTGAAATACAATAAAAAAGA  1148

seq1  GAATTC  1146
      ||||||
seq2  GAATTC  1154

seq1: chr6_63099737_63100814
seq2: B6Ng01-237L07.g_63_1145

seq1  GAATTCACTTTGGCCATGAAATCAAAGTAGACATGATTATAAGTTACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGGCCATGAAATCAAAGTAGACATGATTATAAGTTACAGT  50

seq1  CATTTAAACCACTAAATTTTAGAAATGTATCCCTATCCAATAAATCCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAACCACTAAATTTTAGAAATGTATCCCTATCCAATAAATCCTTA  100

seq1  CATTATCAAGATACTAAAATGTTTGTCTATGTTTCTGCCATAGCATACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCAAGATACTAAAATGTTTGTCTATGTTTCTGCCATAGCATACTG  150

seq1  ATGAGAAATGCCAAGTCTACTATGTCACCTAAGATATTATCAAACTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAATGCCAAGTCTACTATGTCACCTAAGATATTATCAAACTTTAG  200

seq1  CCTTTTCACATGACAAACATTTTCCAGGCCCTAAAGGAGAAGGGAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCACATGACAAACATTTTCCAGGCCCTAAAGGAGAAGGGAATTTT  250

seq1  CACACAAGGCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGGCCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCTGCA  300

seq1  TATTGACTTGTCTTTTTTTCCTTTTGAACATCTTCAAGACAACATAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACTTGTCTTTTTTTCCTTTTGAACATCTTCAAGACAACATAAAAA  350

seq1  TTATAAGCCTCACAATTTTTCATCCAATAGGTTTATACATACATAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGCCTCACAATTTTTCATCCAATAGGTTTATACATACATAGAAAA  400

seq1  TTACTATTTAAATAATTGCATATTATTTAAAAACTAAAAATATTTTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATTTAAATAATTGCATATTATTTAAAAACTAAAAATATTTTTGTG  450

seq1  AAATTTCATTATTCATAGAAATTGTGTGATCATTAACTCAATTAATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCATTATTCATAGAAATTGTGTGATCATTAACTCAATTAATATTT  500

seq1  TAATTAATAAGTTATCTTGTATAGTATAAATCTTAAAGTAACTGTGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATAAGTTATCTTGTATAGTATAAATCTTAAAGTAACTGTGGTAA  550

seq1  CTTAATCATCGTATGGCAAATTAGTAAGCAAAAATCTAGAAATCTAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCATCGTATGGCAAATTAGTAAGCAAAAATCTAGAAATCTAGAAT  600

seq1  CACTTATGTTTTTATGTTGGACTGATGAAATTTCATGTTAGCATGCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATGTTTTTATGTTGGACTGATGAAATTTCATGTTAGCATGCCTTT  650

seq1  GGCATCTCATAAAGAGAACCCTGAATTAGTAGCTGAGCAGCTGACCCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTCATAAAGAGAACCCTGAATTAGTAGCTGAGCAGCTGACCCTAT  700

seq1  CGTTACCCAGAGTAACTTCCAATTTGCTTTCTTGTTAGAAGGATTCATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTACCCAGAGTAACTTCCAATTTGCTTTCTTGTTAGAAGGATTCATTC  750

seq1  CTAAATATAAATAATCTCCCAATTCATGCTAGGCCTACTAGATGCTACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATAAATAATCTCCCAATTCATGCTAGGCCTACTAGATGCTACTT  800

seq1  TGTTCAGGATGA-TTTATGAAAATATGTTTAAATAATTATATTAGACTTG  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGGATGATTTTATGAAAATATGTTTAAATAATTATATTAGACTTG  850

seq1  TTGTCCTAATATTTCATCCTAGCTA-GTGATAAGATACATGCAGATAAAG  898
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTGTCCTAATATTTCATCCTAGCTAGGTGATAAGATACATGCAGATAAAG  900

seq1  GAATTTCAAGTTCCTGTCTCTTCAAGTAATTTCCTGTAATAGAAATTGCA  948
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGATTTCAAGTTCCTGTCTCTTCAAGTAATTTCCTGT-ATAGAAATTGCA  949

seq1  CATTTATACAGTAAAAG-ACATCACATCTCTCCCAACTAGAATG-TAGA-  995
      ||||||||||||||||| |||||||||||||||  ||||| ||| |||| 
seq2  CATTTATACAGTAAAAGAACATCACATCTCTCC--ACTAGGATGTTAGAG  997

seq1  GATGCAGTCAACAGTAGTC-TATCACTTTGT-GTTTACAAC-AAAAATAG  1042
      ||||||||| ||||||||| ||||||||||| ||||||||| ||||||||
seq2  GATGCAGTC-ACAGTAGTCTTATCACTTTGTGGTTTACAACAAAAAATAG  1046

seq1  ATCCAGAGCTAATGTTC-TTATAACTAT-GTTCTATTA  1078
      || ||||||| | |||| |||||||||| |||||||||
seq2  AT-CAGAGCTTAGGTTCTTTATAACTATGGTTCTATTA  1083