BAC Information

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BAC

Clone NameB6Ng01-237L15
Chromosome6 (Build37)
Map Location 11,888,732 - 11,889,900
singlet/doubletsinglet
Overlap genePhf14
Upstream geneAA545190, Ndufa4
Downstream geneLOC100040844, EG625347, LOC435879, Thsd7a, LOC667735
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237L15.bB6Ng01-237L15.g
ACCGA048606GA048607
length1,157449
definitionB6Ng01-237L15.b B6Ng01-237L15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttcttcccattcacaggtttaatcgtagaattctcatatat
ttctctcttaagccattttctaaggcttagatgtaattctatcatacaga
tgttgacagtccattaacacagatagcacaggtagcctcttaattatcag
actctgggccgggcagtggtagtgcacgcctttaatcccagcacttggga
ggcagaggcaggtggatttctgagttcgaggccagcatggtctacaaagt
gagttccaggacagccagggctacacagagaaaccctgtctcaaaaaaac
aaaaacaaaaaaaaatcagactctgtttcactaggtcgtttcctagctca
tgatattcaacaaaacaaaagacaagtgatttagaagtgatggcctacgg
aaacgtttggagttaccactgggatggtgaattatagtgctcatttgggc
ttgtcacttacctctgacgttcaaaagagctcatcccacccttgcctaat
gcttaggtgtcagtccgtgtttctgttatgagccatgtacaggaagtata
gaggagaggaggaagggcatgggtaatgccgcactgaggacctttagtgc
tttatggagtcttacaatgacctttctggccccttttaatttggtcattc
tcattttacaaacgggaacactgtgttcgacagctgtaatgaaagctgca
aatgaacccaggatgttcattagctaccaagataatgtaagcacaggagt
ttctttacaagatagcctcacttcgctttccccgatttgttttacagcgg
tagtaattttagatactattcataaaatgagtcaaaagaattatttcttg
tgaccttttcaggatggtcagtgggtgttgtgacatatgcctgtaatcag
agctagtgagaagtagagacgggaggactagaagttctaggccaaccttg
ggtacataggaagatcaagaacatcttgagatctttggatcttgtctcaa
aaagctcctcccacaaatattaaacatatcattacaattttttaatgaat
gatgctccaagtgttattctttgagagtattgtaagaattaagtgctata
acagccaaaaaatatatggaattcttagtaggtgactgagtaatatattt
tagtgac

catgggaagcccaacagagttaactaacctggacccctaggagctctcag
agactgaataccaatcaaaaagcatacttgggctgtaaccaggctcccgg
tacatatgtaacagacatatgtaggtcagtctccatgtgcgtctctatgg
tatctgttctctgacagagttgccttgtctggtctcagtgggagaggaaa
tactttattctgcagagacttgatgtgctagggttggggaataatgggag
ttgcccaccctcagcagagggagaatgggagcagagactctgtgagggag
taaaggaaaggggggggggagtggcatttgagatgtaaataaataaattt
aaaaaagcattccaggcagtagcaaaattactgttatgaagtagcaacaa
aaataattttttggtttggggtcagcggacatgaggaacggctctcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11888732_11889900
seq2: B6Ng01-237L15.b_43_1199

seq1  GAATTCAGTTTCTTCCCATTCACAGGTTTAATCGTAGAATTCTCATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTCTTCCCATTCACAGGTTTAATCGTAGAATTCTCATATAT  50

seq1  TTCTCTCTTAAGCCATTTTCTAAGGCTTAGATGTAATTCTATCATACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTAAGCCATTTTCTAAGGCTTAGATGTAATTCTATCATACAGA  100

seq1  TGTTGACAGTCCATTAACACAGATAGCACAGGTAGCCTCTTAATTATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACAGTCCATTAACACAGATAGCACAGGTAGCCTCTTAATTATCAG  150

seq1  ACTCTGGGCCGGGCAGTGGTAGTGCACGCCTTTAATCCCAGCACTTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGGCCGGGCAGTGGTAGTGCACGCCTTTAATCCCAGCACTTGGGA  200

seq1  GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCATGGTCTACAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCATGGTCTACAAAGT  250

seq1  GAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAC  300

seq1  AAAAACAAAAAAAAATCAGACTCTGTTTCACTAGGTCGTTTCCTAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAAAAAATCAGACTCTGTTTCACTAGGTCGTTTCCTAGCTCA  350

seq1  TGATATTCAACAAAACAAAAGACAAGTGATTTAGAAGTGATGGCCTACGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTCAACAAAACAAAAGACAAGTGATTTAGAAGTGATGGCCTACGG  400

seq1  AAACGTTTGGAGTTACCACTGGGATGGTGAATTATAGTGCTCATTTGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTTTGGAGTTACCACTGGGATGGTGAATTATAGTGCTCATTTGGGC  450

seq1  TTGTCACTTACCTCTGACGTTCAAAAGAGCTCATCCCACCCTTGCCTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTTACCTCTGACGTTCAAAAGAGCTCATCCCACCCTTGCCTAAT  500

seq1  GCTTAGGTGTCAGTCCGTGTTTCTGTTATGAGCCATGTACAGGAAGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGTGTCAGTCCGTGTTTCTGTTATGAGCCATGTACAGGAAGTATA  550

seq1  GAGGAGAGGAGGAAGGGCATGGGTAATGCCGCACTGAGGACCTTTAGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAGGAGGAAGGGCATGGGTAATGCCGCACTGAGGACCTTTAGTGC  600

seq1  TTTATGGAGTCTTACAATGACCTTTCTGGCCCCTTTTAATTTGGTCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGAGTCTTACAATGACCTTTCTGGCCCCTTTTAATTTGGTCATTC  650

seq1  TCATTTTACAAACGGGAACACTGTGTTCGACAGCTGTAATGAAAGCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTACAAACGGGAACACTGTGTTCGACAGCTGTAATGAAAGCTGCA  700

seq1  AATGAACCCAGGATGTTCATTAGCTACCAAGATAATGTAAGCACAGGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACCCAGGATGTTCATTAGCTACCAAGATAATGTAAGCACAGGAGT  750

seq1  TTCTTTACAAGATAGCCTCACTTCGCTTTCCCCGATTTGTTTTACAGCGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACAAGATAGCCTCACTTCGCTTTCCCCGATTTGTTTTACAGCGG  800

seq1  TAGTAATTTTAGATACTATTCATAAAATGAGTCAAAAGAATTATTTCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTTTAGATACTATTCATAAAATGAGTCAAAAGAATTATTTCTTG  850

seq1  TGACC-TTTCAGGATGGTCAGTGGGTGTTGTGACATATGCCTGTAATCAG  899
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTTTCAGGATGGTCAGTGGGTGTTGTGACATATGCCTGTAATCAG  900

seq1  AGCTAGTGAGAAGTAGAGACGGGAGGACTAGAAGTTCTAGGCCAACCTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGTGAGAAGTAGAGACGGGAGGACTAGAAGTTCTAGGCCAACCTTG  950

seq1  GGTACATAGGAAGATCAAGAACATCTTGAGATCTTTGGATCTTGTCTCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATAGGAAGATCAAGAACATCTTGAGATCTTTGGATCTTGTCTCAA  1000

seq1  AAAGCTCCTCCCCACAAAATATTTAAACATATCATTTACAA-TTTTTATT  1048
      ||||||||| ||||| ||||| |||||||||||| |||||| |||||| |
seq2  AAAGCTCCT-CCCAC-AAATA-TTAAACATATCA-TTACAATTTTTTAAT  1046

seq1  GAAATGATGGTTCCAAGTGTTA-TCTTTGAGAGTATTGGTAGAATTTAAA  1097
      | |||||| | ||||||||||| |||||||||||||||  ||||||  ||
seq2  G-AATGAT-GCTCCAAGTGTTATTCTTTGAGAGTATTGTAAGAATT--AA  1092

seq1  GTGCTATAAACCAGCAAAAAATTAATATGAAATTAAATATAGTTAGTGAC  1147
      |||||||||  |||| ||||| | ||||| ||||     ||||  |||||
seq2  GTGCTATAA--CAGCCAAAAAAT-ATATGGAATT---CTTAGTAGGTGAC  1136

seq1  TGAATTAAATATATTTAGTGAC  1169
      ||| | | |||| |||||||||
seq2  TGAGTAATATAT-TTTAGTGAC  1157


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