BAC Information

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BAC

Clone NameB6Ng01-239N24
Chromosome6 (Build37)
Map Location 140,636,974 - 140,637,961
singlet/doubletsinglet
Overlap genenone
Upstream genePik3c2g, Plcz1, Capza3, LOC100042680, LOC100039020, LOC269810, Plekha5, Aebp2
Downstream geneEG664868, LOC664875, Pde3a, Slco1c1, Slco1b2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239N24.bB6Ng01-239N24.g
ACCGA050186GA050187
length524996
definitionB6Ng01-239N24.b B6Ng01-239N24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttagacattttcatgaagctattaaaaaaaaaaaaaaaaaaacaagttt
agatgattacaatcaactggccgttgtcaacttctggtggcaggtggctg
tcctccacatctttcatttcctttacaaaactccttgaccctccaccaca
ctgcacatttgtgagcagttcctgaggccagggttttattgatgttgaaa
gtcttccctgttgtcttatgacacattttgaactcccataagaaaaggaa
attggcccccaactccagtcgaaactccctgctcaaccacaggccagaat
ggccaccaaaactccaggtggatcactgtctgaggatggcccccactctc
tgaactgtggtcaggatgtaatgaatgagagaagaatgaataaacgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtatacatatacatgtgtgtgtatgta
tatatgtgtatatacatatgcaaattgctctgtactacgttttgctctaa
tattactttccatagtataatgat
gaattccttgtcctccgccttcctccttctaagttctggatgataaactc
gcacgcaccactacgcctggacatgggactccataatctccactgaaaca
atgacagctgagctggaaggatggggcagcagtgaggagcccctacctgg
cagctcacaactgtctgtgactctaattgcaggggatctgtgccctcttc
cagcctgttcaggctcttccatgcgtgtggagtttatgatctcatgtcag
catgcatacacatttttttaaaagccttttaaaaaggaaatgtgctggaa
agctggcttagtgattaacaacgcttgttgcttttttagaggacccaggt
tgggtttccagcatctatatggtagctcacacatcattcataactccagt
tccaggggctccaacactatctcctgacatctgtaggaaccagacatgca
tgtggcacacacacacacacacacacacacacacacacacacacacacat
atacatacacatacatacaggaaaaaaaacacatacataaaatagactaa
atacatctaatacaaaataaaagaagaacttatgtgcttttaatctcata
ttccttatattccattttttttgtacattttcttcagatttctgatgtta
tgggtcagccacttctggtaacttttctttttattgtgtactgtgtggtt
tggctttgtagtttgcctctaagggcatggtggcaaaagtctctagttgt
gggtacagaagcagcatggtgaggcaggggatttacagtcaggctccccg
cagggtcaggctccccgcagggtcaagctccccccccctcccccccaggg
ttcaggctccttgcaagggtcaggcttcaagatgtgagttcactgggggc
tgagcatgaggcaaagtgctcctttgctcaaaggatcttgagattggatc
cctattcctcaggtggggtgggtggggcatgggactaaccagcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_140636974_140637961
seq2: B6Ng01-239N24.g_68_1063

seq1  GAATTCCTTGTCCTCCGCCTTCCTCCTTCTAAGTTCTGGATGATAAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTCCTCCGCCTTCCTCCTTCTAAGTTCTGGATGATAAACTC  50

seq1  GCACGCACCACTACGCCTGGACATGGGACTCCATAATCTCCACTGAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCACCACTACGCCTGGACATGGGACTCCATAATCTCCACTGAAACA  100

seq1  ATGACAGCTGAGCTGGAAGGATGGGGCAGCAGTGAGGAGCCCCTACCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGCTGAGCTGGAAGGATGGGGCAGCAGTGAGGAGCCCCTACCTGG  150

seq1  CAGCTCACAACTGTCTGTGACTCTAATTGCAGGGGATCTGTGCCCTCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCACAACTGTCTGTGACTCTAATTGCAGGGGATCTGTGCCCTCTTC  200

seq1  CAGCCTGTTCAGGCTCTTCCATGCGTGTGGAGTTTATGATCTCATGTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTTCAGGCTCTTCCATGCGTGTGGAGTTTATGATCTCATGTCAG  250

seq1  CATGCATACACATTTTTTTAAAAGCCTTTTAAAAAGGAAATGTGCTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATACACATTTTTTTAAAAGCCTTTTAAAAAGGAAATGTGCTGGAA  300

seq1  AGCTGGCTTAGTGATTAACAACGCTTGTTGCTTTTTTAGAGGACCCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCTTAGTGATTAACAACGCTTGTTGCTTTTTTAGAGGACCCAGGT  350

seq1  TGGGTTTCCAGCATCTATATGGTAGCTCACACATCATTCATAACTCCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTCCAGCATCTATATGGTAGCTCACACATCATTCATAACTCCAGT  400

seq1  TCCAGGGGCTCCAACACTATCTCCTGACATCTGTAGGAACCAGACATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGGCTCCAACACTATCTCCTGACATCTGTAGGAACCAGACATGCA  450

seq1  TGTGGCACACACACACACACACACACACACACACACACACACACACACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCACACACACACACACACACACACACACACACACACACACACACAT  500

seq1  ATACATACACATACATACAGGAAAAAAAACACATACATAAAATAGACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACACATACATACAGGAAAAAAAACACATACATAAAATAGACTAA  550

seq1  ATACATCTAATACAAAATAAAAGAAGAACTTATGTGCTTTTAATCTCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCTAATACAAAATAAAAGAAGAACTTATGTGCTTTTAATCTCATA  600

seq1  TTCCTTATATTCCATTTTTTTTGTACATTTTCTTCAGATTTCTGATGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATATTCCATTTTTTTTGTACATTTTCTTCAGATTTCTGATGTTA  650

seq1  TGGGTCAGCCACTTCTGGTAACTTTTCTTTTTATTGTGTACTGTGTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCAGCCACTTCTGGTAACTTTTCTTTTTATTGTGTACTGTGTGGTT  700

seq1  TGGCTTTGTAGTTTGCCTCTAAGGGCATGGTGGCAAAAGTCTCTAGTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGTAGTTTGCCTCTAAGGGCATGGTGGCAAAAGTCTCTAGTTGT  750

seq1  GGGTACAGAAGCAGCATGGTGAGGCAGGGGATTTACAGTCAGGCTCCCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACAGAAGCAGCATGGTGAGGCAGGGGATTTACAGTCAGGCTCCCCG  800

seq1  CAGGGTCAGGCTCCCCGCAGGGTCAGGCT-CCCCCCCCTCCCCCCCAGGG  849
      ||||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  CAGGGTCAGGCTCCCCGCAGGGTCAAGCTCCCCCCCCCTCCCCCCCAGGG  850

seq1  -TCAGGCTCCTTGC-AGGGTCAGGCT--CAGATGTGAGTTCACT-GGGGC  894
       ||||||||||||| |||||||||||   ||||||||||||||| |||||
seq2  TTCAGGCTCCTTGCAAGGGTCAGGCTTCAAGATGTGAGTTCACTGGGGGC  900

seq1  TGAGCATGAGGCAAAGTGCTCC-TTGCTC-AAGGATC-TGAGATTGGATC  941
      |||||||||||||||||||||| |||||| ||||||| ||||||||||||
seq2  TGAGCATGAGGCAAAGTGCTCCTTTGCTCAAAGGATCTTGAGATTGGATC  950

seq1  CCTATTCCTCAGGTGGGGTGGGTGGGGCATGGGATAAACCCAGCACT  988
      ||||||||||||||||||||||||||||||||||  || ||||||||
seq2  CCTATTCCTCAGGTGGGGTGGGTGGGGCATGGGACTAA-CCAGCACT  996