BAC Information

Click to search

BAC

Clone NameB6Ng01-241L21
Chromosome6 (Build37)
Map Location 124,376,896 - 124,377,740
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC626436, EG546912, LOC100043511, Vmn2r-ps32, EG546913, LOC100043516, EG435916, EG243628, EG545874, LOC384484, LOC623282, V2r1b, EG384486, Vmn2r-ps34, Vmn2r27, LOC623374, EG622297, Cd163, LOC100043530, 1700013D24Rik, 1700027F06Rik, 1700060L04Rik, Pex5
Downstream geneClstn3, C1rl, C1r, C1s, LOC667277, EG317677, Mboat5, Emg1, Phb2, Ptpn6, Grcc10, Atn1, Eno2, Lrrc23, Spsb2, Tpi1, Usp5, Cdca3, Gnb3, Leprel2, Gpr162, Cd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241L21.bB6Ng01-241L21.g
ACCGA051579GA051580
length722845
definitionB6Ng01-241L21.b B6Ng01-241L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtggagcattagtgatatcaacccacccacaaaatttttgac
acaaaatgtatcctgtctccaagaaatgcagagatggaggagggagcaga
gaccgggggagggggatgatcaaacaataactggtccaatttgagaccca
tcccaagggcaagcaccaatccctgacaccatcaatgatactctgttagt
cttgcagacaggagtctagcatggctgtcctctgagtggctccacccagc
agctgactcagacagatatagacaccaacagccaaacagtgaatggaact
tgaggactcttatggaagagttggaggtaagattgcaagctctgaaggag
gtaggagctacagaggaaaaccaacagaatcggctaacctagacctctgg
ggctctcagaaactgaaccaccagtcaaagagcatacacaggctggacct
acacctcccccaacacatacatatgtagcagatgtgcagcttggttgtca
tgtgggtcacaaacaactggagtcccagggaagggggctatcacaaaagc
tgttgcctgtctgtgggatatgttcttggagctgtactgccttgtctggc
ctcagtgaaaaaggatgggcctagtcctacagagacttgatgttccttgg
tgggaggatacgtagggggctccaccctctctaaggaaaaggggaagaag
ggatggaaggaaggattgtggg
gaattcctgagatccttcaaacccttgggggtttcctgggggtgtctgaa
cgtatactgtgtgaggatggactagcgcccaacgaggctaccaatttcct
gaattcactccactcagcagcagcgcgctctctccagctgcttcctgaga
gggaagaaggcatgggaaaggaggtaggcatttgactgatgggtaagccc
ctggcatcatcaggggagggagctgttttatctacctctttagtgctaga
gtttttcagtgctggttcctctctcgcaacatcatcctgagagtacttaa
aataccctcaacctacaagaaaaggacagatgaagttctaaatttagaga
cggtggatagaaggagggggaatggagactctgggatatactagagctgg
ctctgtcagagagagagagagagagagagagagagagagagagagagaga
gagagagagagagagaagctcgtgcctcccggctgtagcttctagtccat
aaggataagggagcccctattttaattttcatgtttaagacatgacccca
gttcttccaaccccttcttccacctccctcagcagttggtatttttctcc
tttttctgtgggttgtaatgtgactggatctggaggaagaggctgttcac
agggacaatagccagtcagaggatgcctttcctttgttggtaggtcaccg
tgaagcatcttctctccatccataccactgtggggaggggaagtaagtgc
aaaagaaggcacagcagtgacaactttcagaccacagcagactacatgcc
agagtgccaggcccgatgttagacctgggctgggctgtgtgggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_124376896_124377740
seq2: B6Ng01-241L21.g_66_910 (reverse)

seq1  GGCCCACACAGCCCAGCCCAGGTCT-ACCTCGGGCCTGGCACTCTGGCAT  49
      ||||||||||||||||||||||||| || |||||||||||||||||||||
seq2  GGCCCACACAGCCCAGCCCAGGTCTAACATCGGGCCTGGCACTCTGGCAT  50

seq1  GTAGTCCTGCTGTGGTCTGAAAGTTGTCACTGCTGTGCCTTCTTTTGCAC  99
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGT-CTGCTGTGGTCTGAAAGTTGTCACTGCTGTGCCTTCTTTTGCAC  99

seq1  TTACTTCCCCTCCCCACAGTGGTATGGATGGAGAGAAGATGCTTCACGGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCCCCTCCCCACAGTGGTATGGATGGAGAGAAGATGCTTCACGGT  149

seq1  GACCTACCAACAAAGGAAAGGCATCCTCTGACTGGCTATTGTCCCTGTGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTACCAACAAAGGAAAGGCATCCTCTGACTGGCTATTGTCCCTGTGA  199

seq1  ACAGCCTCTTCCTCCAGATCCAGTCACATTACAACCCACAGAAAAAGGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTCTTCCTCCAGATCCAGTCACATTACAACCCACAGAAAAAGGAG  249

seq1  AAAAATACCAACTGCTGAGGGAGGTGGAAGAAGGGGTTGGAAGAACTGGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACCAACTGCTGAGGGAGGTGGAAGAAGGGGTTGGAAGAACTGGG  299

seq1  GTCATGTCTTAAACATGAAAATTAAAATAGGGGCTCCCTTATCCTTATGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTCTTAAACATGAAAATTAAAATAGGGGCTCCCTTATCCTTATGG  349

seq1  ACTAGAAGCTACAGCCGGGAGGCACGAGCTTCTCTCTCTCTCTCTCTCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAGCTACAGCCGGGAGGCACGAGCTTCTCTCTCTCTCTCTCTCTC  399

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACAGAGCCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACAGAGCCAG  449

seq1  CTCTAGTATATCCCAGAGTCTCCATTCCCCCTCCTTCTATCCACCGTCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTATATCCCAGAGTCTCCATTCCCCCTCCTTCTATCCACCGTCTC  499

seq1  TAAATTTAGAACTTCATCTGTCCTTTTCTTGTAGGTTGAGGGTATTTTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAGAACTTCATCTGTCCTTTTCTTGTAGGTTGAGGGTATTTTAA  549

seq1  GTACTCTCAGGATGATGTTGCGAGAGAGGAACCAGCACTGAAAAACTCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTCAGGATGATGTTGCGAGAGAGGAACCAGCACTGAAAAACTCTA  599

seq1  GCACTAAAGAGGTAGATAAAACAGCTCCCTCCCCTGATGATGCCAGGGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAAAGAGGTAGATAAAACAGCTCCCTCCCCTGATGATGCCAGGGGC  649

seq1  TTACCCATCAGTCAAATGCCTACCTCCTTTCCCATGCCTTCTTCCCTCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCATCAGTCAAATGCCTACCTCCTTTCCCATGCCTTCTTCCCTCTC  699

seq1  AGGAAGCAGCTGGAGAGAGCGCGCTGCTGCTGAGTGGAGTGAATTCAGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAGCTGGAGAGAGCGCGCTGCTGCTGAGTGGAGTGAATTCAGGA  749

seq1  AATTGGTAGCCTCGTTGGGCGCTAGTCCATCCTCACACAGTATACGTTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTAGCCTCGTTGGGCGCTAGTCCATCCTCACACAGTATACGTTCA  799

seq1  GACACCCCCAGGAAACCCCCAAGGGTTTGAAGGATCTCAGGAATTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCCCAGGAAACCCCCAAGGGTTTGAAGGATCTCAGGAATTC  845