BAC Information

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BAC

Clone NameB6Ng01-242P02
Chromosome6 (Build37)
Map Location 19,773,955 - 19,774,704
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242P02.bB6Ng01-242P02.g
ACCGA052457GA052458
length7531,176
definitionB6Ng01-242P02.b B6Ng01-242P02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttttacatcttaaataaactttccacagataagtgaatcctc
ctgttttctcataaaagtttatgcaattttatcattgttacgatccatgg
tgaacagtgtatgtgtttgtgtatgtgtatgtatgtgtgtgttaatgcat
atattttcccatagtatttctcagaaatgtatcacaccattaatgaaaat
attatggatcatttgtaagttatttttgtggcaaatatgtcagaaatccc
caactcattaggattttttcctctgtgtcctgatacattagtaatcatta
agatgatatgaacttatgccatttccaatactgtgacacaggcaaatggt
tatgagtggtagtcttttaaaaagctaagttcattccaataatcttgttg
cattatatggaaaagctcaaaagaattttggatatatataataaaaggcc
ctaattagttgcttagaattactccaaagcaaaagtgtattgggagattc
attctaaactaatgaggcctctgaagctttacagaaatactctgatttta
ttggaacaaaaccctactccttgattaatatcaaggatgggaatgagggt
cttggaaattgatcccataacttaaaggaaatgatatttagcattaatca
tacagaggatgttatacttcatgtaagatgcagccacctcatgattcctt
gatttcagccttcttgatatggctaagcctcagaactaaataactcgtac
caa

gaattccaggacagccagggttaaacagagaaaccatgtctcgggaaagc
aaaaaaaaaaaaaagaaagaaagaaagatagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaaggcaagcaactacagagagcacacac
taccagcttgacaacacacctaaaagctctagaacaaaaggaagcaaatt
cacccagtgtgagtaggtggcaggaaataattaaactcaggggcaaaatc
aaccaagtgtaaacaagaactattcaaagaatcaaccaaaagaggtgttg
gttctttgagaaaatcaacaagatagataaacccatagccagactcactt
gagggaacaggaacagcatactaattaacaaaatccgaaatgaaaaggga
gacataacaactgatcctgaagaaatccaaaacaccatcagatccttcta
caaaaggctatactcatcaaaactggaaaacctggatgaaatggacaaat
ttccagacagataccaggtaccaaatttaaatcaggatcaggttaatgat
ctaaacagccatatatccccctaaagaaatagaagcagtcattaatagtc
tctcaaccaaaaaaagcccaggaccagaagggtttagtgcagagttctat
cagaccttcaaagtagatctaattccagttcttcactaataattccacaa
aatagaagccgaaggtactatacccaattcattctatgaagccacaataa
ctctgataactaaatcacagaaagacccaacaaacatggagaacttcaga
ctgattcccttatgaatatcaatgcaaaatacttaataaaattcttgcta
accgaatccaggaatacatcaaaacaatcattcatcctgaccaagtaggt
ttcattccagggatgcaggatggtttacaatatgggaaatctgtcaatgt
aatccactatataaacaacctccaagacaaaaaacacatgaacatctcgt
tagatgcagagaatgcattgacaaaatcaaacacccatcatgtaaagact
tggaagatcagattcagtcatactaaatgataaaagcatctactgtagca
gtagcaacataaaattaatgtgaagctggaagccaatcactaaattcaga
ctgacaagccttgccccaccttttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19773955_19774704
seq2: B6Ng01-242P02.b_44_796 (reverse)

seq1  TTGGTACGAGTTATTTAGTTCTGA-GCTTAG-CATATCAAGAA-GCTGAA  47
      |||||||||||||||||||||||| |||||| ||||||||||| ||||||
seq2  TTGGTACGAGTTATTTAGTTCTGAGGCTTAGCCATATCAAGAAGGCTGAA  50

seq1  ATAAAGGAATCATGAGGT-GCTGCAATCTTACATGAAGTATAACATCCTC  96
      || ||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  ATCAAGGAATCATGAGGTGGCTGC-ATCTTACATGAAGTATAACATCCTC  99

seq1  TGTATGATTAATGCTAAATATCATTTCCTTTAAGTTATGGGATCAATTTC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGATTAATGCTAAATATCATTTCCTTTAAGTTATGGGATCAATTTC  149

seq1  CAAGACCCTCATTCCCATCCTTGATATTAATCAAGGAGTAGGGTTTTGTT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCCTCATTCCCATCCTTGATATTAATCAAGGAGTAGGGTTTTGTT  199

seq1  CCAATAAAATCAGAGTATTTCTGTAAAGCTTCAGAGGCCTCATTAGTTTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAAATCAGAGTATTTCTGTAAAGCTTCAGAGGCCTCATTAGTTTA  249

seq1  GAATGAATCTCCCAATACACTTTTGCTTTGGAGTAATTCTAAGCAACTAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATCTCCCAATACACTTTTGCTTTGGAGTAATTCTAAGCAACTAA  299

seq1  TTAGGGCCTTTTATTATATATATCCAAAATTCTTTTGAGCTTTTCCATAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCCTTTTATTATATATATCCAAAATTCTTTTGAGCTTTTCCATAT  349

seq1  AATGCAACAAGATTATTGGAATGAACTTAGCTTTTTAAAAGACTACCACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAACAAGATTATTGGAATGAACTTAGCTTTTTAAAAGACTACCACT  399

seq1  CATAACCATTTGCCTGTGTCACAGTATTGGAAATGGCATAAGTTCATATC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCATTTGCCTGTGTCACAGTATTGGAAATGGCATAAGTTCATATC  449

seq1  ATCTTAATGATTACTAATGTATCAGGACACAGAGGAAAAAATCCTAATGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAATGATTACTAATGTATCAGGACACAGAGGAAAAAATCCTAATGA  499

seq1  GTTGGGGATTTCTGACATATTTGCCACAAAAATAACTTACAAATGATCCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGATTTCTGACATATTTGCCACAAAAATAACTTACAAATGATCCA  549

seq1  TAATATTTTCATTAATGGTGTGATACATTTCTGAGAAATACTATGGGAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTCATTAATGGTGTGATACATTTCTGAGAAATACTATGGGAAA  599

seq1  ATATATGCATTAACACACACATACATACACATACACAAACACATACACTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCATTAACACACACATACATACACATACACAAACACATACACTG  649

seq1  TTCACCATGGATCGTAACAATGATAAAATTGCATAAACTTTTATGAGAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCATGGATCGTAACAATGATAAAATTGCATAAACTTTTATGAGAAA  699

seq1  ACAGGAGGATTCACTTATCTGTGGAAAGTTTATTTAAGATGTAAAAGAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGGATTCACTTATCTGTGGAAAGTTTATTTAAGATGTAAAAGAGA  749

seq1  ATTC  750
      ||||
seq2  ATTC  753


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