BAC Information

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BAC

Clone NameB6Ng01-243B07
Chromosome6 (Build37)
Map Location 17,027,693 - 17,028,631
singlet/doubletsinglet
Overlap geneTes, EG232599
Upstream geneLOC100041116, Tcfec, EG435881
Downstream geneCav2, Cav1, Met, Capza2, St7, Wnt2, Asz1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243B07.bB6Ng01-243B07.g
ACCGA052561GA052562
length1,198986
definitionB6Ng01-243B07.b B6Ng01-243B07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaggagccagaaggtgtcaaagacctcaggagaacatggaccgc
agaatcaactaagcagggctcatagaggctcacagagatagaaatgacaa
tcaagtagcatgtatgggtctgagctaggccctctgcttatatgttatgg
ttgtgtagtttggctttctgtggagcttgtaacagtgtgagcaaagactg
tctctgatgcttccctgcttcaggacctttttcctactattggctcacct
ggttcagcattgacatgagagtttgtgcttagtcttattgtaatttatgc
cagcctatttttttctcttaagggaaacgggagaaatagacctagagaaa
acaggaggtagggaaactggaagagatggaggcaggggaaactgcagttg
aaggtgtaatgtatgaaaagaatgtaaattaaaattaaaagaaaaaaaaa
gaacttttaagatcctagagagtttggattgttataggtccaggattaaa
ttaaaatttatcctgggctatatgttagctccccttaatgccactccttt
tccacccttgtgtttgatctaacaccctcgtgagcagcaggtgaaatgtt
tgagatggactcacttagcagacccctgactatcctgtgggcagcttcac
caatgcgtctacaattgtttttgaaaaatgtcttgattctttgttctgtt
accagtaaaacttgatgacactgcctttcctttggaacttgggctttggg
gtgacttcagtatgtgttcccagaccatggtcactgattgggttccagaa
taaaccatctctttattccctttgagattagagttgtgtttttgtgtgaa
gaaaagcaactttaagtaagacagtatttattttgtttcacagttcaagg
agggatacagttcatcacagtacaagtcatggtgacagggcccatgaggt
gacgggtcacattgcatccacagtcaggaagtggatagtgacagatgatc
ctactacgcttgggctccccttttctattaagtccaggcctgaacagaca
ttgcttccacagtcaaggtgatttcacctcagtacctatctaagataata
tctattctagaatatcctgtagaaacctgtaggctagctaaatagaacct
ttttccaaggccatacgtgtccccgagacctatattttctctagcgtg
gaattccataactctttgcagtccttcccaagaaaaatgcagtcgttttc
ctcccctttgtctgtactgctgttatttccttggtccaatttgaggtatt
gaatgggctagtgtcagttccaggcttgggcttcaacagaccttgcttgt
ctctctctgcttccttggagctctgatcctattttgggaagtagccaggc
cagcctggagggaaagagaggccacagaaacagatgagcgatctcagcag
gagctcccctgaaccattcaccctgaagtgaacagaagcgtggctggctg
ctggtccagctagctgaccccaggtcataccattgttgaggcatgaagag
aacagaaaggacaaaataaacaactgtctttatcagtgcacttgtaggtt
tttaagcaccaaatcatggctgggatagtcttatctccctcctgtagtca
gaggtatggaaggagtcatggtggtgactttcttcaactctgaattacgt
atacagtctaatattctgtgaacagggaagagtcaaagaagaatggagca
tagcttcgggacatgggagtggcccctctaatcacttaactttagtttct
ttttttgttccaccaaggtaaagagagattgaattagcatgcaactgaaa
tttgatagtagctgtaagtagagtgtatatgcatgcttggaagtgtggac
actatgcccctccttagatttgggaacaaaacacccatggaaggagttac
agagacggagtttggagctgagatgaaaggatggaccatctagagactgc
catatccagggatccaccccataatcagcatccaaacgctgacaccattg
catacactagcaagattttattgaaaggacgcagatgtagctgtctcttg
tgagactatgccggggcccagcaaacacagaagtggatgctcacagttca
gcttaatgggatggatcatagggctcccaatggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_17027693_17028631
seq2: B6Ng01-243B07.g_69_1007

seq1  GAATTCCATAACTCTTTGCAGTCCTTCCCAAGAAAAATGCAGTCGTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAACTCTTTGCAGTCCTTCCCAAGAAAAATGCAGTCGTTTTC  50

seq1  CTCCCCTTTGTCTGTACTGCTGTTATTTCCTTGGTCCAATTTGAGGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTTGTCTGTACTGCTGTTATTTCCTTGGTCCAATTTGAGGTATT  100

seq1  GAATGGGCTAGTGTCAGTTCCAGGCTTGGGCTTCAACAGACCTTGCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGCTAGTGTCAGTTCCAGGCTTGGGCTTCAACAGACCTTGCTTGT  150

seq1  CTCTCTCTGCTTCCTTGGAGCTCTGATCCTATTTTGGGAAGTAGCCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTGCTTCCTTGGAGCTCTGATCCTATTTTGGGAAGTAGCCAGGC  200

seq1  CAGCCTGGAGGGAAAGAGAGGCCACAGAAACAGATGAGCGATCTCAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGAGGGAAAGAGAGGCCACAGAAACAGATGAGCGATCTCAGCAG  250

seq1  GAGCTCCCCTGAACCATTCACCCTGAAGTGAACAGAAGCGTGGCTGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCCCTGAACCATTCACCCTGAAGTGAACAGAAGCGTGGCTGGCTG  300

seq1  CTGGTCCAGCTAGCTGACCCCAGGTCATACCATTGTTGAGGCATGAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCAGCTAGCTGACCCCAGGTCATACCATTGTTGAGGCATGAAGAG  350

seq1  AACAGAAAGGACAAAATAAACAACTGTCTTTATCAGTGCACTTGTAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAGGACAAAATAAACAACTGTCTTTATCAGTGCACTTGTAGGTT  400

seq1  TTTAAGCACCAAATCATGGCTGGGATAGTCTTATCTCCCTCCTGTAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCACCAAATCATGGCTGGGATAGTCTTATCTCCCTCCTGTAGTCA  450

seq1  GAGGTATGGAAGGAGTCATGGTGGTGACTTTCTTCAACTCTGAATTACGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATGGAAGGAGTCATGGTGGTGACTTTCTTCAACTCTGAATTACGT  500

seq1  ATACAGTCTAATATTCTGTGAACAGGGAAGAGTCAAAGAAGAATGGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTCTAATATTCTGTGAACAGGGAAGAGTCAAAGAAGAATGGAGCA  550

seq1  TAGCTTCGGGACATGGGAGTGGCCCCTCTAATCACTTAACTTTAGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCGGGACATGGGAGTGGCCCCTCTAATCACTTAACTTTAGTTTCT  600

seq1  TTTTTTGTTCCACCAAGGTAAAGAGAGATTGAATTAGCATGCAACTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTCCACCAAGGTAAAGAGAGATTGAATTAGCATGCAACTGAAA  650

seq1  TTTGATAGTAGCTGTAAGTAGAGTGTATATGCATGCTTGGAAGTGTGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAGTAGCTGTAAGTAGAGTGTATATGCATGCTTGGAAGTGTGGAC  700

seq1  ACTATGCCCCTCCTTAGATTTGGGAACAAAACACCCATGGAAGGAGTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGCCCCTCCTTAGATTTGGGAACAAAACACCCATGGAAGGAGTTAC  750

seq1  AGAGACGGAGTTTGGAGCTGAGATGAAAGGATGGACCATCTAGAGACTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACGGAGTTTGGAGCTGAGATGAAAGGATGGACCATCTAGAGACTGC  800

seq1  CATATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACACCATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACACCATTG  850

seq1  CATACACTAGCAAGATTTTATTGAAAGGACGCAGATGTAGCTGTCTCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACTAGCAAGATTTTATTGAAAGGACGCAGATGTAGCTGTCTCTTG  900

seq1  TGAGACTATGCCGGGGCCCAGCAAACACAGAAGTGGATG  939
      |||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTATGCCGGGGCCCAGCAAACACAGAAGTGGATG  939