BAC Information

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BAC

Clone NameB6Ng01-243N12
Chromosome6 (Build37)
Map Location 18,805,578 - 18,806,416
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8
Downstream geneAnkrd7, LOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243N12.bB6Ng01-243N12.g
ACCGA053123GA053124
length830987
definitionB6Ng01-243N12.b B6Ng01-243N12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaacaacttgggctatactgagaagccttgtctcaaaacaaa
acaagcaagcaaacaaacaaacaaacaaacaaaaggattagattttgtat
cttacttatgatcttccctgaagaatcttgtgtgaacttgagaagaactg
gtattttgttggtttgagattacaagctctgtacatatcagtaggccatt
tggcctatgtgtagtcaatctatgttactcctgtttttgttgatggctca
ttctgaatggtagaggtcttcataatgattttcattaacttaatgctcaa
attgtttaccttagaaaattattgctaaataatgctctctatcccactcc
gaacccgaatctcaaaaatcctaacaatcaaaagaatgccccttctacat
ttatctctgtaagcaaaagtaaaactttagggaaaagtctttaggttgtt
taaaattaacaaacgggttcaaaaggttcaaaaaaaatttttggggatgt
gacggataatgcttttaattattaggggggggtgtaatcgccataaaaga
aaattttagggaaaaagggggagacaaaaaggccccccctgttgtgggga
acccccaaaaaaaaaaacgcgggttttttttttttacaaaaaaaaaaatt
ttttttaaaaaaaataaacaaaaacattccccgggagaggaaaaaagaga
ggggggtgttttttatttgggagaaaaaaaaaaaaaaaaccaagaaaaag
ccctcgcgggtgactccccccccccctctctttttttttttttatgaaaa
aagaaaaaaggtgtgttgtgtttggtgttt

gaattcaaggatataagttgtcttcaagacatcttccaaagatggaaggg
tttcatgttaaaacattttaaaaatctagcattttaggtctttttgtatt
ttgtgtatttttcatatatttaaattgttctttatctttttgtagcatgg
ataaagatttgttataaaaaattccactctattgtcctacttcagtattc
tttatgtgatataatttctctgttctcattaggatagtagtaaagtaaac
tataaacctttttttttttaatctgtttgttctctttcagaaatggcact
aatagcatgcctcctggaaaagaagtcctctcttccaagtggttcttccc
cccttttatgaagcagatctttttctcatacagtataatgtgattacagt
tcccctccactcctcccaggtcctgccagctacctcttccattcagatct
attctttctgtttctcattagagaggaacagatttcaaagagataccaac
aaaacatatcaaaaaattaataagatgaaacaagaaccaccacatccagg
ttggacaaagcaagccaacaggaaaataaaagagccccaggagaaggcac
aagaatcagagacccgccgcttcacacagtcaggagtcccataaaaatag
aaaactgaaaagtcttatgtgcgcgcagaggacctggtgtagatatgccg
gccctgtgcttgctgcttcagtttccctaaattcatgtgagctttgctca
gttgttttaaagggctttgttctggtatggaccacccctgctgtctccac
tcctgcttccccttccatggggttcactgagctctaaggggagtggtttg
atggtgtcttagttagggttttactgctgtgaacagacaccatgaccaag
gtaagtcttacaaaaacatttaattggggctggcttacaggttcaagggt
tcagttcattatcaaagtggggagcatggcagtatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18805578_18806416
seq2: B6Ng01-243N12.g_65_903

seq1  GAATTCAAGGATATAAGTTGTCTTCAAGACATCTTCCAAAGATGGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGATATAAGTTGTCTTCAAGACATCTTCCAAAGATGGAAGGG  50

seq1  TTTCATGTTAAAACATTTTAAAAATCTAGCATTTTAGGTCTTTTTGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTTAAAACATTTTAAAAATCTAGCATTTTAGGTCTTTTTGTATT  100

seq1  TTGTGTATTTTTCATATATTTAAATTGTTCTTTATCTTTTTGTAGCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATTTTTCATATATTTAAATTGTTCTTTATCTTTTTGTAGCATGG  150

seq1  ATAAAGATTTGTTATAAAAAATTCCACTCTATTGTCCTACTTCAGTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGATTTGTTATAAAAAATTCCACTCTATTGTCCTACTTCAGTATTC  200

seq1  TTTATGTGATATAATTTCTCTGTTCTCATTAGGATAGTAGTAAAGTAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGATATAATTTCTCTGTTCTCATTAGGATAGTAGTAAAGTAAAC  250

seq1  TATAAACCTTTTTTTTTTTAATCTGTTTGTTCTCTTTCAGAAATGGCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACCTTTTTTTTTTTAATCTGTTTGTTCTCTTTCAGAAATGGCACT  300

seq1  AATAGCATGCCTCCTGGAAAAGAAGTCCTCTCTTCCAAGTGGTTCTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCATGCCTCCTGGAAAAGAAGTCCTCTCTTCCAAGTGGTTCTTCCC  350

seq1  CCCTTTTATGAAGCAGATCTTTTTCTCATACAGTATAATGTGATTACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTATGAAGCAGATCTTTTTCTCATACAGTATAATGTGATTACAGT  400

seq1  TCCCCTCCACTCCTCCCAGGTCCTGCCAGCTACCTCTTCCATTCAGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCCACTCCTCCCAGGTCCTGCCAGCTACCTCTTCCATTCAGATCT  450

seq1  ATTCTTTCTGTTTCTCATTAGAGAGGAACAGATTTCAAAGAGATACCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTCTGTTTCTCATTAGAGAGGAACAGATTTCAAAGAGATACCAAC  500

seq1  AAAACATATCAAAAAATTAATAAGATGAAACAAGAACCACCACATCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATATCAAAAAATTAATAAGATGAAACAAGAACCACCACATCCAGG  550

seq1  TTGGACAAAGCAAGCCAACAGGAAAATAAAAGAGCCCCAGGAGAAGGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACAAAGCAAGCCAACAGGAAAATAAAAGAGCCCCAGGAGAAGGCAC  600

seq1  AAGAATCAGAGACCCGCCGCTTCACACAGTCAGGAGTCCCATAAAAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCAGAGACCCGCCGCTTCACACAGTCAGGAGTCCCATAAAAATAG  650

seq1  AAAACTGAAAAGTCTTATGTGCGCGCAGAGGACCTGGTGTAGATATGCCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGAAAAGTCTTATGTGCGCGCAGAGGACCTGGTGTAGATATGCCG  700

seq1  GCCCTGTGCTTGCTGCTTCAGTTTCCCTAAATTCATGTGAGCTTTGCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTGCTTGCTGCTTCAGTTTCCCTAAATTCATGTGAGCTTTGCTCA  750

seq1  GTTGTTTTAAAGGGCTTTGTTCTGGTATGGACCACCCCTGCTGTCTCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTAAAGGGCTTTGTTCTGGTATGGACCACCCCTGCTGTCTCCAC  800

seq1  TCCTGCTTCCCCTTCCATGGGGTTCACTGAGCTCTAAGG  839
      |||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTTCCCCTTCCATGGGGTTCACTGAGCTCTAAGG  839


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