BAC Information

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BAC

Clone NameB6Ng01-244G12
Chromosome6 (Build37)
Map Location 107,412,127 - 107,412,873
singlet/doubletsinglet
Overlap genenone
Upstream geneCntn4, Il5ra, Trnt1, Crbn, Ppia-ps6_1128.1
Downstream geneLrrn1, Setmar, Sumf1, LOC100043718, Itpr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244G12.bB6Ng01-244G12.g
ACCGA053549GA053550
length1,072795
definitionB6Ng01-244G12.b B6Ng01-244G12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctcagcatctaacaagatgatcatgtgttttttgtcttt
gagtttgtttatatagtggattacattgatggaattccaaatattaaacc
atccctgcatccctgagatgaagcctacttgatcatgatgtttgatcgtt
ttgatgtgttattggattcggtttgtgaggattttattggaaataaggga
aatcagtctgaagttatcttattgtgtggtttagatatcagagtaattgt
ggcttcatagaatgaattaggtagagtaccttctgcttctattttgtgga
atagtttgaggagaactggaattagatcttctttgaaggtctgatagaac
tctgcaccaaacccatctggtcctgggcttttttgtttgagagattatta
aggactgcttctatttctttagggtatataggactgtttagatcattaat
ctgatccttatttaacttttgtacctggtatctgtctaggaagttgtcca
tttcatccatgttttccagttttgtttgtttgtttgtttgttttgttgag
tataccattatgtagtaggatctgatgattttttttttttttggatttcc
tcagattctgttgctatatctcccttttcatttctgattttgttaattag
gatactgtccctgtgtcctctagttagtatggctgagggtttatctatct
tgttgattttctcaaagaaccagcttctggtttggttcattctttgtata
gtttttttttgtttccactttgtttgatttgagccctgagtttgattatt
cctgttgtctactcctcttgggtgaatttgcttcctttgtctagagcttt
taggtacgctcttgctccagtttcttttttggagcactcagagctattga
gttttcctcttaggcatgctttccattgtgtcctaagtttggtatgttgt
gcttcattttcattaaacctctgaaagtgcttaattctttctttctgaca
agctacatgagatagggacgtg
gaattcctatcatatatcttttatgtatctttatttttctattcatgtgt
ctttcatgtatctatcaatcactcacctacatatgtagctacctatccat
ccattttctgggtctctataggacattgattgttggctgcttctctgaag
aacacttaccaatgcaatggagatataaacttcagatggttgattagatc
agctgcccctagaaccttatgaggctctctctgtttctgtcattcaaagg
tttccaccactatttcaaccactaacaaataacaagtttttcaaatatac
ggaatcagagactcctgggaaaatatggcattcttcagagcctgagcttt
cctctggttcccacagtctccctgagtgtcctcagcctgtctccatcgat
gactgcatgctgatttccatcacatttcacaggttctgcacttcctattc
gctggaggcttcctttgagaatacaatgcagatcctccactgcagtgatt
tcctctgggtatgaatggttggaaggcacagggtaattaaaacccacact
tgcaagcatgtctgactgactgatgtgaactcccctctgattggggtctg
atttgaataagaatgccaagcagagccaaaagaaagtgaaggctactgga
agctttctctcttctgaaaagaaaatgttagaccaggactggcttcttat
gtcattctatctccctctccctctccctctccctctccctctccctcacc
ttccccatcaccattctgggtctgggttttatgtctcaagagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_107412127_107412873
seq2: B6Ng01-244G12.g_65_811

seq1  GAATTCCTATCATATATCTTTTATGTATCTTTATTTTTCTATTCATGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATCATATATCTTTTATGTATCTTTATTTTTCTATTCATGTGT  50

seq1  CTTTCATGTATCTATCAATCACTCACCTACATATGTAGCTACCTATCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGTATCTATCAATCACTCACCTACATATGTAGCTACCTATCCAT  100

seq1  CCATTTTCTGGGTCTCTATAGGACATTGATTGTTGGCTGCTTCTCTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTCTGGGTCTCTATAGGACATTGATTGTTGGCTGCTTCTCTGAAG  150

seq1  AACACTTACCAATGCAATGGAGATATAAACTTCAGATGGTTGATTAGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTACCAATGCAATGGAGATATAAACTTCAGATGGTTGATTAGATC  200

seq1  AGCTGCCCCTAGAACCTTATGAGGCTCTCTCTGTTTCTGTCATTCAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCCTAGAACCTTATGAGGCTCTCTCTGTTTCTGTCATTCAAAGG  250

seq1  TTTCCACCACTATTTCAACCACTAACAAATAACAAGTTTTTCAAATATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACCACTATTTCAACCACTAACAAATAACAAGTTTTTCAAATATAC  300

seq1  GGAATCAGAGACTCCTGGGAAAATATGGCATTCTTCAGAGCCTGAGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAGAGACTCCTGGGAAAATATGGCATTCTTCAGAGCCTGAGCTTT  350

seq1  CCTCTGGTTCCCACAGTCTCCCTGAGTGTCCTCAGCCTGTCTCCATCGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTTCCCACAGTCTCCCTGAGTGTCCTCAGCCTGTCTCCATCGAT  400

seq1  GACTGCATGCTGATTTCCATCACATTTCACAGGTTCTGCACTTCCTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCATGCTGATTTCCATCACATTTCACAGGTTCTGCACTTCCTATTC  450

seq1  GCTGGAGGCTTCCTTTGAGAATACAATGCAGATCCTCCACTGCAGTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGCTTCCTTTGAGAATACAATGCAGATCCTCCACTGCAGTGATT  500

seq1  TCCTCTGGGTATGAATGGTTGGAAGGCACAGGGTAATTAAAACCCACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGGGTATGAATGGTTGGAAGGCACAGGGTAATTAAAACCCACACT  550

seq1  TGCAAGCATGTCTGACTGACTGATGTGAACTCCCCTCTGATTGGGGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCATGTCTGACTGACTGATGTGAACTCCCCTCTGATTGGGGTCTG  600

seq1  ATTTGAATAAGAATGCCAAGCAGAGCCAAAAGAAAGTGAAGGCTACTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATAAGAATGCCAAGCAGAGCCAAAAGAAAGTGAAGGCTACTGGA  650

seq1  AGCTTTCTCTCTTCTGAAAAGAAAATGTTAGACCAGGACTGGCTTCTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTCTCTTCTGAAAAGAAAATGTTAGACCAGGACTGGCTTCTTAT  700

seq1  GTCATTCTATCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTC  747
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCTATCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTC  747