BAC Information

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BAC

Clone NameB6Ng01-244N13
Chromosome6 (Build37)
Map Location 131,114,664 - 131,115,203
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100038894, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830
Downstream geneEG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244N13.bB6Ng01-244N13.g
ACCGA053882GA053883
length5341,183
definitionB6Ng01-244N13.b B6Ng01-244N13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
attcatattttccagtgtctgattgataatgccaacagaaacatgttaca
aaaaataaattggattgcttttgacaaattctaagaccacagttctgaag
tgtgtatgtgttgagcagagaaaacccatgattttcctgagtatgtatgt
gtgtgttttttatgcataaaatcacttgtattacaaggaacatagtttct
gttccagggcaaaattctaagtagacccaatggatggggaagaggttgaa
gctttaagattacaactcctcctctgttcaaaatgttcatgttcatagtg
cattcttcatattgtccacaatagaattctcactcctttttttttttccc
gaatcacaggaggtctcaaaatatgattaaaagggaaaggccctctttta
cttattgcaaatgataatatatttagtacttgagtctctgcttgccattt
tggatttcaagcaaacagtacaaggacattgagggtatttgaattacatt
ttgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgt
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaaaa
aatgttcaccatccttaatcatcatggaaatgcaaatcaaagcaactctg
agattcaacctcacaccagttagaatgtctaagataaaaagttcaggtga
cagcagatgctggcgaggatgtggagaaagaggaacactcctccattgtt
ggtgggagtgcaggcttgtacaaccactctggaaatcagtctggcggttc
ctcagaaaactggacatagtactaccggaggatccagcaatacctctcct
gggcatatatccagaagatgccccaacaggtaagaaggacacatgctcca
ctatgttcatagcagccttatttataatagccagaagctggaaagaacct
agatgcccctcaacagaggaatggatacagaaaatgtggtacatctacac
aatggagtactactcagctattaaaaagaatgaatttatgaaattcctag
ccaaatggatggacctggagggcatcatcctgagtgaggtaacacattca
caaagaaactcacacaatatgtattcactgataagtggatattagcccca
aacctaggatacccaagatataagatataatttgctaaacacatgaaact
caaggagaatgaagactgaagtgtggacactatgcccctccttagatttg
ggaacaaaacacccatggaaggagttacagagacggagtttggagctgag
atgaaaggatggaccatgtagatactgccatagccagggatccaccccat
aatcagcatccaaacgctgacaccattgtatacactagcaagattttatt
gaaaggacgcagatgtagctgtctcttgtgagactatgccggggcccagc
aaacacagaagtggatgctcacagtcagctaatggatggatcatagggct
cccaatggaggagctagagaagtagccaaggagctaaggggatctgcaac
ctataggtagacacaatatgaactaaccagtaccccggagctctttgttc
tctctagctgcatttattatcaaaagatgcttagtcgcatcactggaaag
agaggtccaattgggacttgcactttaatgcccagatacaggaatacatg
gactcaaaaatgttgagtgcgaatactggctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_131114664_131115203
seq2: B6Ng01-244N13.b_50_589 (reverse)

seq1  ACACATACACACACACACACACACACACACACAAAATGTAATTCAAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACACACACACACACACACACACACAAAATGTAATTCAAATAC  50

seq1  CCTCAATGTCCTTGTACTGTTTGCTTGAAATCCAAAATGGCAAGCAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATGTCCTTGTACTGTTTGCTTGAAATCCAAAATGGCAAGCAGAGA  100

seq1  CTCAAGTACTAAATATATTATCATTTGCAATAAGTAAAAGAGGGCCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTACTAAATATATTATCATTTGCAATAAGTAAAAGAGGGCCTTTC  150

seq1  CCTTTTAATCATATTTTGAGACCTCCTGTGATTCGGGAAAAAAAAAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAATCATATTTTGAGACCTCCTGTGATTCGGGAAAAAAAAAAAGG  200

seq1  AGTGAGAATTCTATTGTGGACAATATGAAGAATGCACTATGAACATGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAATTCTATTGTGGACAATATGAAGAATGCACTATGAACATGAAC  250

seq1  ATTTTGAACAGAGGAGGAGTTGTAATCTTAAAGCTTCAACCTCTTCCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAACAGAGGAGGAGTTGTAATCTTAAAGCTTCAACCTCTTCCCCA  300

seq1  TCCATTGGGTCTACTTAGAATTTTGCCCTGGAACAGAAACTATGTTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGGTCTACTTAGAATTTTGCCCTGGAACAGAAACTATGTTCCTT  350

seq1  GTAATACAAGTGATTTTATGCATAAAAAACACACACATACATACTCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATACAAGTGATTTTATGCATAAAAAACACACACATACATACTCAGGA  400

seq1  AAATCATGGGTTTTCTCTGCTCAACACATACACACTTCAGAACTGTGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGGGTTTTCTCTGCTCAACACATACACACTTCAGAACTGTGGTC  450

seq1  TTAGAATTTGTCAAAAGCAATCCAATTTATTTTTTGTAACATGTTTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTTGTCAAAAGCAATCCAATTTATTTTTTGTAACATGTTTCTGT  500

seq1  TGGCATTATCAATCAGACACTGGAAAATATGAATGAATTC  540
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTATCAATCAGACACTGGAAAATATGAATGAATTC  540