BAC Information

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BAC

Clone NameB6Ng01-246K12
Chromosome6 (Build37)
Map Location 64,405,450 - 64,406,406
singlet/doubletsinglet
Overlap geneGrid2
Upstream genenone
Downstream geneAtoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745, EG667141, C130060K24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246K12.bB6Ng01-246K12.g
ACCGA055215GA055216
length1,210958
definitionB6Ng01-246K12.b B6Ng01-246K12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccctatattttaatggggttatttgatt
ttctggagttcaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggattggtaaagatccatttccaatctattggtggcct
ttttgtcttgttgaaggtgtcttttgccttacagaagctttgcagtttta
tgaggtcccatttgccgattctcgatcttacagcacaagccattgctgtt
ttgtttaggaatattttcccctgtgtccatatcttcgagggttttcccca
ctttctcctttataaatttcagtgtctctggttttatgtggagttctttg
atccacttagacttgagctttgtacaaggacataagaatgggtcaattca
cattcttctacatgataaccgtaagttgtgccagcaccttgaaaatttgt
tgaaaatgctgtcttttttctgctggatggttttagcttccttgtcaaag
atcgagtgaccataggtgtgtggattcatttctgggacttcaattctatt
ccattgatctatctgtctgttgctgtaccagtaccatgcagtttttatca
caattgctttgtagtacagctttaggtcaggcatggtgattcccccagag
gttcttttatcagtgagaagagtttttgctttcctaggtattttgctact
ccagatgaatttgtaaattgccctttctaattcgtggaagaattgagttg
gaattttgatgaagattgctgtgaatctgtaggttgctttaggccaaaca
agatagccatttttactatattgatcctgccaatctatgagcatgggaga
tcttttcatcttctgagactcttctttgatctctttcttcagagacttga
agttctaatcatacaaggctttcattttcttagttaaagtcaaaccaagg
tattttatattattgtgactattgtgaagtgtgttgtttccctaatttct
ttctcagcctgttatcctttgtgtagagaaaggccattgatttttttgga
gtaattatattcaagctactgcaactgaagctggtcatcaaggtttagag
tcttctgggtggaattggctaggatcacttaatgtagactaataatatca
ctcgcaaaaggggagttgactccttccattctcaaaatgtagacctcgca
cgttgatgat
gaattctaagtcactagaggacagatttaaaaagagataaaatgtatttc
atatttctccaaagacatcttagataacacataaaaagtccagttaaaat
attgaagggtatagggaataaaggcatgcttagatacacaagtagcaaaa
ttctacttctaactggcatctcataagtaatttattggatcctgtgttct
cccaaaaacatgaagaaacaagaaaaatatacaggaactgagtggcaggt
tggacacatttaagcctcctgaaagggagtttaggtcactgagaaaggta
gaaatcgagtaagtaccaactatgcaagaattaaacaaaggagaaggaac
catacccagcaatggaaaataattccttatagtttgtttaacgaataaac
tgtgcatgcaaatatatgtgtatataggataggaaagttatctttggatg
atgaggcaagagaggaaaagaaagtaaaattttatcttttatggtcagaa
ataacaatctatgcttaaaatagaatgcagaatgtaatctgtgtttcttt
tgcatatttaccttaaagtaactcttgctttataaagctgtaaatggtga
catggtttcattctcccatttctcccatgttaacaccttgtggcactagg
acacatttgtgaaagctgaggtagcaaaattgttgcagtatgttgtctag
tttttgcatggatgtctttattcttctgttcctggttcttttccaggata
taacatcacatgtagctgttgcttgtcattagtttgctctggagcataat
aatctttatctaattgtttttcacgactttggcagttttgagaaataatt
gttaggtgttttggaatatttctgtcaatttgggcttgtcagatgttttt
gttcactactaattgagattctgggggattaggaagatttgtgtggggag
agggatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_64405450_64406406
seq2: B6Ng01-246K12.g_69_1026 (reverse)

seq1  ACATCCCTCT-CCCACACAAATCTTCCTAATCCCCCAGAATCTCATTTAG  49
      |||||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  ACATCCCTCTCCCCACACAAATCTTCCTAATCCCCCAGAATCTCAATTAG  50

seq1  TAGTGAACAAAAACATCTGACAAGCCCAAATTGACAGAAATATTCCAAAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAACAAAAACATCTGACAAGCCCAAATTGACAGAAATATTCCAAAA  100

seq1  CACCTAACAATTATTTCTCAAAACTGCCAAAGTCGTGAAAAACAATTAGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAACAATTATTTCTCAAAACTGCCAAAGTCGTGAAAAACAATTAGA  150

seq1  TAAAGATTATTATGCTCCAGAGCAAACTAATGACAAGCAACAGCTACATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATTATTATGCTCCAGAGCAAACTAATGACAAGCAACAGCTACATG  200

seq1  TGATGTTATATCCTGGAAAAGAACCAGGAACAGAAGAATAAAGACATCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTATATCCTGGAAAAGAACCAGGAACAGAAGAATAAAGACATCCA  250

seq1  TGCAAAAACTAGACAACATACTGCAACAATTTTGCTACCTCAGCTTTCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAACTAGACAACATACTGCAACAATTTTGCTACCTCAGCTTTCAC  300

seq1  AAATGTGTCCTAGTGCCACAAGGTGTTAACATGGGAGAAATGGGAGAATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTCCTAGTGCCACAAGGTGTTAACATGGGAGAAATGGGAGAATG  350

seq1  AAACCATGTCACCATTTACAGCTTTATAAAGCAAGAGTTACTTTAAGGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATGTCACCATTTACAGCTTTATAAAGCAAGAGTTACTTTAAGGTA  400

seq1  AATATGCAAAAGAAACACAGATTACATTCTGCATTCTATTTTAAGCATAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCAAAAGAAACACAGATTACATTCTGCATTCTATTTTAAGCATAG  450

seq1  ATTGTTATTTCTGACCATAAAAGATAAAATTTTACTTTCTTTTCCTCTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTATTTCTGACCATAAAAGATAAAATTTTACTTTCTTTTCCTCTCT  500

seq1  TGCCTCATCATCCAAAGATAACTTTCCTATCCTATATACACATATATTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCATCATCCAAAGATAACTTTCCTATCCTATATACACATATATTTG  550

seq1  CATGCACAGTTTATTCGTTAAACAAACTATAAGGAATTATTTTCCATTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACAGTTTATTCGTTAAACAAACTATAAGGAATTATTTTCCATTGC  600

seq1  TGGGTATGGTTCCTTCTCCTTTGTTTAATTCTTGCATAGTTGGTACTTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATGGTTCCTTCTCCTTTGTTTAATTCTTGCATAGTTGGTACTTAC  650

seq1  TCGATTTCTACCTTTCTCAGTGACCTAAACTCCCTTTCAGGAGGCTTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATTTCTACCTTTCTCAGTGACCTAAACTCCCTTTCAGGAGGCTTAAA  700

seq1  TGTGTCCAACCTGCCACTCAGTTCCTGTATATTTTTCTTGTTTCTTCATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCAACCTGCCACTCAGTTCCTGTATATTTTTCTTGTTTCTTCATG  750

seq1  TTTTTGGGAGAACACAGGATCCAATAAATTACTTATGAGATGCCAGTTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGAGAACACAGGATCCAATAAATTACTTATGAGATGCCAGTTAG  800

seq1  AAGTAGAATTTTGCTACTTGTGTATCTAAGCATGCCTTTATTCCCTATAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAATTTTGCTACTTGTGTATCTAAGCATGCCTTTATTCCCTATAC  850

seq1  CCTTCAATATTTTAACTGGACTTTTTATGTGTTATCTAAGATGTCTTTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAATATTTTAACTGGACTTTTTATGTGTTATCTAAGATGTCTTTGG  900

seq1  AGAAATATGAAATACATTTTATCTCTTTTTAAATCTGTCCTCTAGTGACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATGAAATACATTTTATCTCTTTTTAAATCTGTCCTCTAGTGACT  950

seq1  TAGAATTC  957
      ||||||||
seq2  TAGAATTC  958