BAC Information

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BAC

Clone NameB6Ng01-248I15
Chromosome6 (Build37)
Map Location 128,788,378 - 128,789,475
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d
Downstream geneLOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248I15.bB6Ng01-248I15.g
ACCGA056590GA056591
length1,1241,164
definitionB6Ng01-248I15.b B6Ng01-248I15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttattccattgaaaaaagaaaaacatctagtagcttgcatcat
caaaataagtttcgagtactcaattaactgagccgaagtttgccggctct
ggtggcgcaggccggtaggatttgctgaaggaggcagaggcaggaggatc
tggagttcgaggacagcctggtctacacatttttttttcctcccagtttc
aacaaaaccacaaatccacggctccactgcgccccgaaacaaacttccaa
cctccacaaggcctctttttatgtttcttcctcctgaaatctgatcggct
actcgcaccccaacccgaaccagcttcttcagccgcaccggctactgctc
cacgctgcttacaaacctttatccacgcacacgtccgaccctcacgcctg
cccacgccgcactccacacccctctcttccctacaggccttctctacaat
ccgcctgcttagccctctcgcgacccttttctacagttctgcacgtgcgg
aacgagtcagcagccaccgttcagagaaaatgttcgctgcaaagagtccg
ttttttctcgcttcgagtgttcggttttatgtacaaagaaagaaagtgag
gattacttagagtcagaaacaggctcagcggaagcgcggttgcgcaacgc
ctaacttgctacttcagggaaagaatacagggcgtcgtcgggctggagag
atggctcagccgttaaaggctaggctcacaaccaaaaatataagagttcg
gttcccagcacccacggctgtctctccagccacctttttttgtcggacac
cgcacccacacacacagactactaaatatagataaaagacaacttcttta
gaaaatgtttatcggctgttaacgaaattggaaaacaatgatttaaataa
aagcaaacaagccaagtaaagaacttaacgtttcaacaccctgcgtattg
gcccggaggatttgcgcgctgggcgtcttgccttagtcacttaggcggtg
atgacttctttcattgctgttggctagtgaactcgaattcaactcggacg
tcgtctcttctctcctctctctttacctactccctctcaattttgaaaaa
ggtagttttggccaattacatgga
gaattcactacttcttaaaggaaatgaaaatttaattttgctattttcct
ggctagtgaaaaagagcatgtctgtcatgaaggacagcacaggagagacc
tggcacccagttgcttcatggtcaccgtgttccctttcatcagtgttgtt
tagatgcagttattgctaacatttgggtgatatgcaaagccatattataa
gccctcagctcgtgagcagcagaagcaggaagatctctgtgagttagcgg
ccagcctagtctgcatagggagttccaggccagccaggactacatacaga
gactgtcttcaaaagggaaatcacagcagaaaaataaaatagttgtatac
tagtgctattcttaaaaacaaaatcctactgaggggtggagagatgactc
agcagctaagaggtctgcttgttcttgcagaggaccgaggtgtggttccc
aacaccttacagttgctagcaaccatccctaagttccaggggacccagtg
ccctattatgaccactgtaggcaccaggtatgcacatgatgcacatgcat
acaagcaggcaaacattcatacacatgaaagtaaaataaataaatcttaa
aatattcaaagaagcttaaacaacagcaacataaatctctattgcagttt
taaaggccagaggttcagaagagatcctttttttttttcatgtatttatt
cattttatatcctgactacagtttcccctccctcctcttctcccagccct
ccctaccccatcaacctccctttctccccccatcaactcttcttccctct
ctgttcagaaaagggatggcctctcatggctatcaacccaccttggcttc
ccatacgactagactcatcttttttttgaggctagagaggaagcccagtt
tagcagaatgcaggcaacagaattcagagacagcccctactcctgctgtt
aggagtcccaacaacgaagaccaagctacatactgctatagagggctacg
tctgtcctatgtatgcctctcttgtttggtagttcatctcttgtgagccc
ctgttggtccaagttaattgattcgtgtggggatttcttgggtagtcata
acctctctggctccttcagtctccatacccttttaccggattcagcttcc
gtaagtctttggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128788378_128789475
seq2: B6Ng01-248I15.b_48_1171

seq1  GAATTCTTTATTCCATTGAAAAAAGAAAAACATCTAGTAGCTTGCATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATTCCATTGAAAAAAGAAAAACATCTAGTAGCTTGCATCAT  50

seq1  CAAAATAAGTTTCGAGTACTCAATTAACTGAGCCGAAGTTTGCCGGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAGTTTCGAGTACTCAATTAACTGAGCCGAAGTTTGCCGGCTCT  100

seq1  GGTGGCGCAGGCCGGTAGGATTTGCTGAAGGAGGCAGAGGCAGGAGGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCGCAGGCCGGTAGGATTTGCTGAAGGAGGCAGAGGCAGGAGGATC  150

seq1  TGGAGTTCGAGGACAGCCTGGTCTACACATTTTTTTTTCCTCCCAGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTCGAGGACAGCCTGGTCTACACATTTTTTTTTCCTCCCAGTTTC  200

seq1  AACAAAACCACAAATCCACGGCTCCACTGCGCCCCGAAACAAACTTCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCACAAATCCACGGCTCCACTGCGCCCCGAAACAAACTTCCAA  250

seq1  CCTCCACAAGGCCTCTTTTTATGTTTCTTCCTCCTGAAATCTGATCGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACAAGGCCTCTTTTTATGTTTCTTCCTCCTGAAATCTGATCGGCT  300

seq1  ACTCGCACCCCAACCCGAACCAGCTTCTTCAGCCGCACCGGCTACTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGCACCCCAACCCGAACCAGCTTCTTCAGCCGCACCGGCTACTGCTC  350

seq1  CACGCTGCTTACAAACCTTTATCCACGCACACGTCCGACCCTCACGCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTGCTTACAAACCTTTATCCACGCACACGTCCGACCCTCACGCCTG  400

seq1  CCCACGCCGCACTCCACACCCCTCTCTTCCCTACAGGCCTTCTCTACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGCCGCACTCCACACCCCTCTCTTCCCTACAGGCCTTCTCTACAAT  450

seq1  CCGCCTGCTTAGCCCTCTCGCGACCCTTTTCTACAGTTCTGCACGTGCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTGCTTAGCCCTCTCGCGACCCTTTTCTACAGTTCTGCACGTGCGG  500

seq1  AACGAGTCAGCAGCCACCGTTCAGAGAAAATGTTCGCTGCAAAGAGTCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGTCAGCAGCCACCGTTCAGAGAAAATGTTCGCTGCAAAGAGTCCG  550

seq1  TTTTTTCTCGCTTCGAGTGTTCGGTTTTATGTACAAAGAAAGAAAGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTCGCTTCGAGTGTTCGGTTTTATGTACAAAGAAAGAAAGTGAG  600

seq1  GATTACTTAGAGTCAGAAACAGGCTCAGCGGAAGCGCGGTTGCGCAACGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTTAGAGTCAGAAACAGGCTCAGCGGAAGCGCGGTTGCGCAACGC  650

seq1  CTAACTTGCTACTTCAGGGAAAGAATACAGGGCGTCGTCGGGCTGGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTGCTACTTCAGGGAAAGAATACAGGGCGTCGTCGGGCTGGAGAG  700

seq1  ATGGCTCAGCCGTTAAAGGCTAGGCTCACAACCAAAAATATAAGAGTTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAGCCGTTAAAGGCTAGGCTCACAACCAAAAATATAAGAGTTCG  750

seq1  GTTCCCAGCACCCACGGCTGTCTCTCCAGCCACC-TTTTTTGTCGGACAC  799
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTTCCCAGCACCCACGGCTGTCTCTCCAGCCACCTTTTTTTGTCGGACAC  800

seq1  CGCACCCACACACACAGACTACT-AATATAGATAAAAGACAACT--CTTA  846
      ||||||||||||||||||||||| ||||||||||||||||||||   |||
seq2  CGCACCCACACACACAGACTACTAAATATAGATAAAAGACAACTTCTTTA  850

seq1  GAAAATG-TTATCGGCTG-TAACGAAA-TGGAAAACAATGATTTAAAT-A  892
      ||||||| |||||||||| |||||||| |||||||||||||||||||| |
seq2  GAAAATGTTTATCGGCTGTTAACGAAATTGGAAAACAATGATTTAAATAA  900

seq1  AAGCAAACAAG-CAAGTAAAGAAC-TAACG-TTCCACACCCTGCGTAT--  937
      ||||||||||| |||||||||||| ||||| ||| |||||||||||||  
seq2  AAGCAAACAAGCCAAGTAAAGAACTTAACGTTTCAACACCCTGCGTATTG  950

seq1  GGCCGGAGGATTTGCGCGCT-GGCGTC-TGCCCTAGTCACTTAG--CGTG  983
      | |||||||||||||||||| |||||| |||| |||||||||||   |||
seq2  GCCCGGAGGATTTGCGCGCTGGGCGTCTTGCCTTAGTCACTTAGGCGGTG  1000

seq1  ATGACTTCTTTCA-TGCTGTT-GCTAGTG-ACTCCAAATCAACTC-GACG  1029
      ||||||||||||| ||||||| ||||||| |||| || ||||||| ||||
seq2  ATGACTTCTTTCATTGCTGTTGGCTAGTGAACTCGAATTCAACTCGGACG  1050

seq1  TCGTCCTCTCCTCCCTCCTCTCTTTA-CTACT-CCTCTC-ATTTTGAAAA  1076
      |||| |||| ||| |  ||||||||| ||||| |||||| ||||||||||
seq2  TCGT-CTCTTCTCTCCTCTCTCTTTACCTACTCCCTCTCAATTTTGAAAA  1099

seq1  AAGTAGTTTTGGC---ATACATGGA  1098
      | |||||||||||    ||||||||
seq2  AGGTAGTTTTGGCCAATTACATGGA  1124