MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-248J19
Chromosome	6 (Build37)
Map Location	81,559,084 - 81,659,742
singlet/doublet	doublet
Overlap gene	none
Upstream gene	LOC100043390, LOC100042991
Downstream gene	LOC232143, 1700009C05Rik, AW146020, Mrpl19, Tmem166, EG622198, Tacr1, Pole4
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043390 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042991 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042991
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	LOC232143 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:232143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins pseudo : _no_value

name	1700009C05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74220 MGI:1921470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	AW146020 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330361 MGI:2141656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrpl19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56284 MGI:1926274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem166 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232146 MGI:2385247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622198 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622198 MGI:3648353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Tacr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21336 MGI:98475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pole4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66979 MGI:1914229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043390 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255262 GeneID:100043390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : similar to antigen LEC-A transcript_id : XM_001479609.1

name	1700009C05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377942 GeneID:74220 MGI:1921470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 1700009C05 gene transcript_id : XM_896866.2

name	AW146020 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608162 GeneID:330361 MGI:2141656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW146020 transcript_id : NM_177884.3

name	Mrpl19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608147 GeneID:56284 MGI:1926274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L19 transcript_id : NM_026490.2

name	Tmem166 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704145 GeneID:232146 MGI:2385247
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 166 transcript_id : NM_145570.1

name	Tacr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892945 GeneID:21336 MGI:98475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tachykinin receptor 1 transcript_id : NM_009313.4

name	Pole4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350372 GeneID:66979 MGI:1914229
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA-directed), epsilon 4 (p12 subunit) transcript_id : NM_025882.2

name	LOC100043390 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255263 GeneID:100043390
definition	codon_start : 1 product : similar to antigen LEC-A protein_id : XP_001479659.1

name	1700009C05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029284 GeneID:74220 MGI:1921470
definition	codon_start : 1 product : hypothetical protein LOC74220 protein_id : XP_901959.1

name	AW146020 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608163 CCDS:CCDS20260.1 GeneID:330361 MGI:2141656
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 product : hypothetical protein LOC330361 protein_id : NP_808552.2

name	Mrpl19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385976 GeneID:56284 MGI:1926274
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005761 - mitochondrial ribosome [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence ISS] [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence ISS] [Evidence IEA] codon_start : 1 note : ribosomal protein, mitochondrial, L15 product : mitochondrial ribosomal protein L19 protein_id : NP_080766.1

name	Tmem166 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704146 CCDS:CCDS20261.1 GeneID:232146 MGI:2385247
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC232146 protein_id : NP_663545.1

name	Tacr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543840 CCDS:CCDS20262.1 GeneID:21336 MGI:98475
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0048265 - response to pain [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : NK1 receptor; neurokinin receptor 1; substance p receptor product : tachykinin receptor 1 protein_id : NP_033339.2

name	Pole4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385366 GeneID:66979 MGI:1914229
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : DNA polymerase epsilon subunit 4 protein_id : NP_080158.1

name	LOC100042991 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042991
definition	number : 1 pseudo : _no_value

name	EG622198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622198
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:130945
definition	standard_name : D6Mit4

name	(CDS detail)
type	STS
link
xref	UniSTS:130757
definition	standard_name : D6Mit212

name	(CDS detail)
type	STS
link
xref	UniSTS:123487
definition	standard_name : 20.MMHAP6FLG2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130828
definition	standard_name : D6Mit281

name	(CDS detail)
type	STS
link
xref	UniSTS:122689
definition	standard_name : 02.MHAa92a2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:125079
definition	standard_name : MHAa21b5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124151
definition	standard_name : 35.MMHAP64FLD5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123874
definition	standard_name : 29.MMHAP75FRB11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:179398
definition	standard_name : AW146020

name	(CDS detail)
type	STS
link
xref	UniSTS:167469
definition	standard_name : RH126592

name	(CDS detail)
type	STS
link
xref	UniSTS:130754
definition	standard_name : D6Mit210

name	(CDS detail)
type	STS
link
xref	UniSTS:130687
definition	standard_name : D6Mit144

name	(CDS detail)
type	STS
link
xref	UniSTS:130938
definition	standard_name : D6Mit386

name	(CDS detail)
type	STS
link
xref	UniSTS:220607
definition	standard_name : RH138520

name	(CDS detail)
type	STS
link
xref	UniSTS:121920
definition	standard_name : D4MGH17

name	(CDS detail)
type	STS
link
xref	UniSTS:480302
definition	standard_name : Tacr1

name	(CDS detail)
type	STS
link
xref	UniSTS:207981
definition	standard_name : RH127103

name	(CDS detail)
type	STS
link
xref	UniSTS:130670
definition	standard_name : D6Mit129

name	(CDS detail)
type	STS
link
xref	UniSTS:130671
definition	standard_name : D6Mit129.1

name	LOC232143 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255220 GeneID:232143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins product : similar to High mobility group box 2 pseudo : _no_value transcript_id : XR_034125.1

clone name	MSMg01-420O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336N11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-344E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002O15
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-248J19.b	B6Ng01-248J19.g
ACC	GA056643	GA056644
length	1,166	1,116
definition	B6Ng01-248J19.b	B6Ng01-248J19.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(81,559,084 - 81,560,251)	(81,658,619 - 81,659,742)
sequence	gaattcttatcatgacctcagcatgtataaattatcctcctgcattcctc atcttgggccaggctgtgagatatctacaggagaaaagtgtgaatgatat taaaccatttcaagtctgtgccttttaggaagtctttggtaattctgccc aatgcttatacctctactgttgacctcaaaaaagtttttacagagtcttg agagcaatcagggaatgaatgcatgtggggtatgcaaaacagaaccccag agttcccaatgtatgcaaataaacacacacactttatcttacaactccag ctgacctgaagacttgtgagccagccctggtgtattgctctatgcagtgt aaacttcttgcctgtaactgcagtcactgtggactgtgatgggaatgaga tgaagcagctcatgcaggaactctaagaatccctgtcactcagacttgga agctgaaagctggtgctcagataagtatactgtgagtgttttttataaat aaagttttattgaaatatgactgtgcccattcatttgcgcattgtgtcta gcttcattcttgctgcaaaggcagcttgctgattcccaatcaattaagtt caaagccccatattttaacgtaagaaaacgtggaccacataaaaacaagt acgcttgccaacatttcaatgcacagaaacacagattcttgtagatcttg gcccttggctgtcttaagtcaatacttggtggatgtttgtttgtttgatt tccacaatgacatgtttaacacacttagaaacgtgtatttaatgaacaca aagctggtatttttaactttgttctcatcgatggtcttcttccactttca atatctgttcaaccccagttttcttatttaaaattaacagaaacccaaag ctaccaaagtaaaagttagtttgcccttttctctggccttattctcattg ttgagagactatgtggggcctggagagatattcagcagctaatagcatct gttgctcttacaagtggaccgggctcctttttcagtacggacgtggttaa tcacacatctgttactctggtcaggtggatcttatgtctcttcctggctt ttgtggtaccgaaaccacactatgcctgtgtgtacatacaatacatgctt ggcaagcacctcatat	tggagtttactagccaattagtgagttgtagatttgatgagagaccctgc ctaaaaagcaaaatgaagagtgatagatgaaaacacgtgagactgacctg accccaacccccactcatacaaaactcacaaaataaaattttaaaaatta aaaagaagaaacactactttttatgacaatcaaattattttgtgtataat atttgcaaattgctattttgctgtactgatttctacttttctctgtttgg gagttacatttcttcccaattcagaatgatagacaattctactttgaaat gttttatgcacatgtacaaggatttctgtagggtagataagggtatacat ataaggattttcaaattgcattgtggattttggaagtcaggcaagttttg caggtggagtggctgacaggctcctgccctgctgatatttatggctgatt ggaatacctcgctgatattatgaatattttccctctcttggcttggtagg agctgagtgatattcatggccatcttggttaggttttattgtcaatgtgg cacaatgtagagttacctggaaagagaaacctcaattgaattgttctatt caaaatggctcatgggcatgttcttgggggcattatcttgatgaagattg atgtaggagggtccagtgcaccatggatggcgtcattcctcatcaggtgg tctgagactatagaagaaagctagctgagcaggagttagtaagtgaagga gccagaaagtgcattcccttcctggtttctgcctcctgctcctgccatga gttcctgtcttgactttcctcagtgatggattgtgacctagaagtataat ccaaaatagcccttttcttgccaagttcttttcagtcttgatatttatca catcaatggaaagaacactgtgtctcagctcttccattctattggctgca ggtccttggaacagtgctgcctcctaggagtttactgatgatattccttc ccagtttctgttgcaaggctagcattccatgtgtagtaatctcatgatta cactattgactagttactgattctgaaagtaggtggaaaatgcctaattc ctcatctcatagcttc
quality values	Open. Hide. 58 25 33 34 58 54 58 54 52 54 31 27 62 62 47 62 62 62 47 30 62 47 62 62 62 62 62 62 62 62 46 62 54 62 54 62 62 62 62 62 62 62 59 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 59 62 62 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 49 54 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 52 58 52 58 58 54 58 58 54 58 58 58 58 58 58 49 54 58 58 54 58 58 58 58 48 54 54 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 53 58 58 58 52 58 58 58 58 58 58 58 53 58 58 58 53 58 58 58 58 51 54 58 58 58 58 50 58 58 58 58 58 58 58 58 58 50 48 43 58 47 58 42 49 50 58 58 54 58 51 58 58 46 41 58 50 58 48 50 51 58 51 50 58 53 47 48 58 50 58 53 53 40 58 58 51 51 58 58 50 40 51 51 41 58 58 53 50 51 51 51 49 50 54 50 58 58 58 49 50 52 51 58 51 47 34 51 37 50 50 53 41 58 49 49 32 50 44 54 52 53 53 47 53 54 54 51 51 50 40 40 50 51 42 51 54 49 35 25 49 49 54 40 52 42 53 42 54 54 49 52 37 52 52 45 41 31 54 53 53 42 54 40 45 36 53 33 52 47 38 51 43 41 54 33 46 34 51 41 38 53 51 37 53 32 42 35 42 33 52 40 32 49 53 45 45 33 32 52 53 31 49 31 45 26 51 29 53 32 39 26 52 32 39 26 52 32 31 41 16 53 28 31 45 35 43 33 32 34 52 34 31 29 37 51 31 51 32 27 33 37 31 42 34 32 42 51 30 26 35 46 28 30 31 45 45 31 30 31 51 45 32 32 31 36 31 31 34 23 42 28 48 41 32 43 34 36 46 29 31 31 47 47 47 22 14 31 31 31 46 41 33 30 31 42 29 42 32 31 33 32 43 32 38 33 19 31 31 30 36 25 31 26 29 15 27 25 47 15 24 24 28 18 27 31 36 31 33 15 36 28 24 37 31 46 32 38 26 16 33 46 48 17 18 33 41 25 21 48 33 24 47 47 24 21 34 25 24 14 18 24 31 28 10 6 28 7 27 36 26 24 31 31 23 19 8 7 13 29 17 16 24 47 44 31 13 6 13 9 24 34 48 38 33 19 41 26 32 48 48 32 14 6 15 31 30 30 12 19 16 6 7 14 14 13 18 32 27 32 27 17 17 18 21 43 9 9 4 11 16 25 32 32 32 20 20 48 39 13 22 21 27 32 18 32 12 10 5 11 8 8 4 15 16 16 13 28 27 20 25 14 24 28 13 16 9 27 20 32 26 18 21 22 20 28 20 20 8 9 29 13 10 7 13 18 17 12 17 8 7 11 3 21 12 3 6 10 15 3 8 8 5 3 4 19 11 11 6 11 4 7 28 24 10 4 9 9 3 6 22 4 3 3 6 6 15 4 11 14 7 1 2 5 11 17 18 12 18 17 14 12 3 3 3 3 1 4 8 16 19 19 9 14 8 20 6 22 11 19 4 5 14 7 7 6 18 5 6 14 7 18 17 7 6 8 24 9 1 3 4 3 2 3 17 6 16 5 12 8 2 3 2 2 6 7 10 12 1 5 4 9 1 2 3 6 6 5 15 7 7 4 4 17 6 13 4 4 7 14 4 7 15 8 3 3 6 11 12 5 16 8 8 6 5 7 4 10	Open. Hide. 62 62 62 47 47 56 38 28 38 31 47 44 56 62 44 47 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 59 59 62 62 59 54 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 59 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 54 54 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 44 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 52 62 62 62 62 62 62 62 62 62 62 62 54 42 62 62 62 62 62 48 62 54 58 58 58 58 58 58 58 58 54 54 54 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 47 58 58 52 58 58 58 58 42 58 58 54 42 54 54 58 58 52 58 58 58 58 45 41 58 58 58 53 58 58 58 54 52 51 45 49 58 58 58 58 45 58 58 58 58 54 58 58 58 58 58 58 53 58 51 54 49 58 58 58 58 52 58 51 58 58 50 46 58 58 58 58 49 58 58 53 58 53 58 58 49 47 58 58 53 50 50 51 58 58 58 48 41 58 58 52 50 51 53 53 53 58 41 33 58 58 49 41 58 58 41 58 53 53 50 58 58 54 51 37 51 54 51 52 53 53 51 54 58 58 54 54 40 31 42 41 49 50 54 52 53 51 49 40 49 54 53 39 53 32 51 54 34 27 54 45 42 33 54 51 39 54 50 38 42 42 38 45 42 51 52 33 39 53 35 40 54 54 51 40 54 51 31 47 33 42 37 54 52 31 53 52 41 33 52 43 40 17 46 32 54 51 31 45 32 52 53 35 35 29 52 40 53 32 33 53 53 30 47 49 34 31 35 40 31 40 45 53 30 29 10 47 37 24 46 34 20 45 33 37 37 38 31 45 36 39 37 51 41 31 42 45 28 33 51 31 37 51 51 45 43 33 33 34 34 41 43 39 51 51 30 27 32 32 23 40 45 31 48 31 31 32 31 22 28 31 32 35 27 42 30 28 31 35 24 32 25 36 31 34 38 42 22 37 33 33 34 26 40 24 41 27 24 37 28 31 33 48 29 31 31 26 38 32 14 21 31 35 16 44 31 38 25 22 39 21 31 32 33 38 35 31 7 32 31 19 31 24 25 15 36 34 33 33 27 48 48 36 26 38 26 37 48 25 31 47 47 24 16 14 18 42 7 8 5 30 31 23 20 30 29 47 47 21 24 33 28 29 18 16 31 36 26 12 12 16 47 21 15 22 33 32 32 32 32 33 19 16 23 21 24 23 43 7 7 26 16 21 17 22 27 32 19 15 13 29 23 27 31 10 32 21 19 24 24 17 14 43 18 18 11 14 16 22 32 17 26 4 15 27 26 13 21 17 15 18 18 26 19 13 21 8 7 5 12 7 12 20 21 28 20 21 7 8 5 14 24 22 28 24 28 13 28 47 20 24 20 20 29 27 26 27 16 11 20 20 15 21 8 13 7 38 40 30 14 11 18 40 20 27 16 16 10 24 16 15 27 13 22 22 8 15 17 11 11 14 23 11 7 13 16 7 8 3 3 8 22 11 15 23 23 11 18 12 12 18 10 23 22 4 10 3 5 13 13 14 2 1 2 4 11 22 9 18 6 7 7 6 10 1 3 15 11 16 5 2 5 8 28 16 15 7 13 13 15 11 4 4 17 29 17 16 5 16 5 10 16 14 14 13 17 6 6 18 12 11 4 6 5 4 3 6 18 6 7 5 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_81559084_81560251
seq2: B6Ng01-248J19.b_44_1209

seq1  GAATTCTTATCATGACCTCAGCATGTATAAATTATCCTCCTGCATTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCATGACCTCAGCATGTATAAATTATCCTCCTGCATTCCTC  50

seq1  ATCTTGGGCCAGGCTGTGAGATATCTACAGGAGAAAAGTGTGAATGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGCCAGGCTGTGAGATATCTACAGGAGAAAAGTGTGAATGATAT  100

seq1  TAAACCATTTCAAGTCTGTGCCTTTTAGGAAGTCTTTGGTAATTCTGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATTTCAAGTCTGTGCCTTTTAGGAAGTCTTTGGTAATTCTGCCC  150

seq1  AATGCTTATACCTCTACTGTTGACCTCAAAAAAGTTTTTACAGAGTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTATACCTCTACTGTTGACCTCAAAAAAGTTTTTACAGAGTCTTG  200

seq1  AGAGCAATCAGGGAATGAATGCATGTGGGGTATGCAAAACAGAACCCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAATCAGGGAATGAATGCATGTGGGGTATGCAAAACAGAACCCCAG  250

seq1  AGTTCCCAATGTATGCAAATAAACACACACACTTTATCTTACAACTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCAATGTATGCAAATAAACACACACACTTTATCTTACAACTCCAG  300

seq1  CTGACCTGAAGACTTGTGAGCCAGCCCTGGTGTATTGCTCTATGCAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGAAGACTTGTGAGCCAGCCCTGGTGTATTGCTCTATGCAGTGT  350

seq1  AAACTTCTTGCCTGTAACTGCAGTCACTGTGGACTGTGATGGGAATGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTTGCCTGTAACTGCAGTCACTGTGGACTGTGATGGGAATGAGA  400

seq1  TGAAGCAGCTCATGCAGGAACTCTAAGAATCCCTGTCACTCAGACTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGCTCATGCAGGAACTCTAAGAATCCCTGTCACTCAGACTTGGA  450

seq1  AGCTGAAAGCTGGTGCTCAGATAAGTATACTGTGAGTGTTTTTTATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAAGCTGGTGCTCAGATAAGTATACTGTGAGTGTTTTTTATAAAT  500

seq1  AAAGTTTTATTGAAATATGACTGTGCCCATTCATTTGCGCATTGTGTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTTATTGAAATATGACTGTGCCCATTCATTTGCGCATTGTGTCTA  550

seq1  GCTTCATTCTTGCTGCAAAGGCAGCTTGCTGATTCCCAATCAATTAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTCTTGCTGCAAAGGCAGCTTGCTGATTCCCAATCAATTAAGTT  600

seq1  CAAAGCCCCATATTTTAACGTAAGAAAACGTGGACCACATAAAAACAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCCCATATTTTAACGTAAGAAAACGTGGACCACATAAAAACAAGT  650

seq1  ACGCTTGCCAACATTTCAATGCACAGAAACACAGATTCTTGTAGATCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTGCCAACATTTCAATGCACAGAAACACAGATTCTTGTAGATCTTG  700

seq1  GCCCTTGGCTGTCTTAAGTCAATACTTGGTGGATGTTTGTTTGTTTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGGCTGTCTTAAGTCAATACTTGGTGGATGTTTGTTTGTTTGATT  750

seq1  TCCACAATGACATGTTTAACACACTTAGAAACGTGTATTTAATGAACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAATGACATGTTTAACACACTTAGAAACGTGTATTTAATGAACACA  800

seq1  AAGCTGGTATTTTTAACTTTGTTCTCATCGATGGTCTTCTTCCACTTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGTATTTTTAACTTTGTTCTCATCGATGGTCTTCTTCCACTTTCA  850

seq1  ATATCTGTTCAACCCCAGTTTTCTTATTTAAAAATTAACAGAAA-CCAAA  899
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  ATATCTGTTCAACCCCAGTTTTCTTATTT-AAAATTAACAGAAACCCAAA  899

seq1  GCTACCAAAGTAAAAG-TAGTTTGCCCTTTTCTCTGGCC-TATTCTCATT  947
      |||||||||||||||| |||||||||||||||||||||| ||||||||||
seq2  GCTACCAAAGTAAAAGTTAGTTTGCCCTTTTCTCTGGCCTTATTCTCATT  949

seq1  GTTGAAGAAGACTATGT-GGGCCTGGAGAGATATTCAGCAGCTAATAGCA  996
      |||||   ||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTGA--GAGACTATGTGGGGCCTGGAGAGATATTCAGCAGCTAATAGCA  997

seq1  TCTGTTGCTCTTAC-AGTGGACCCGGGCTCCTTTCTCAGTACCGACGTGG  1045
      |||||||||||||| |||||| |||||||||||| ||||||| |||||||
seq2  TCTGTTGCTCTTACAAGTGGA-CCGGGCTCCTTTTTCAGTACGGACGTGG  1046

seq1  TAATTCACAACATCCTGTTACTCTGGTTCCAGTGGATCTTATGTCCTCTT  1095
      | | |||| |||| |||||||||||| ||  ||||||||||||| |||||
seq2  TTAATCAC-ACAT-CTGTTACTCTGG-TCAGGTGGATCTTATGT-CTCTT  1092

seq1  -CTTGCCTTTGTGGGAACCAAACACACACCTATGCCTGTGGTGTACATAC  1144
       || || ||||||| | | |||| |||| |||||||||| ||||||||||
seq2  CCTGGCTTTTGTGGTACCGAAAC-CACA-CTATGCCTGT-GTGTACATAC  1139

seq1  -ATACATGC-TGGCAAGCA-CTCATAT  1168
       |||||||| ||||||||| |||||||
seq2  AATACATGCTTGGCAAGCACCTCATAT  1166

seq1: chr6_81658619_81659742
seq2: B6Ng01-248J19.g_69_1184 (reverse)

seq1  GAAGCTTATGAAGATGAAGAATTAGCATTTTTCAACCTACTTTCAAGAAT  50
      ||||| |||| |||||| |||||||   ||||| |||||||||| |||||
seq2  GAAGC-TATG-AGATGAGGAATTAGGCATTTTCCACCTACTTTC-AGAAT  47

seq1  CAGGTACTAGTCACTAAGTTGTTAATCATGAGATTTACTACAACATGAAA  100
      |||  |||||||| | |||   ||||||||||| ||||||| ||||| ||
seq2  CAGTAACTAGTCAAT-AGT--GTAATCATGAGA-TTACTAC-ACATGGAA  92

seq1  TGCTAGCCTTGCAACAGAAACTGGGGAGGAATATCATCAGTAAACTCCTA  150
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGCTAGCCTTGCAACAGAAACTGGGAAGGAATATCATCAGTAAACTCCTA  142

seq1  -GAGGCAGCACTTGTCCAAGGACCTGCAGCCAATAGAATTGGAAGAGCTG  199
       |||||||||||  |||||||||||||||||||||||| |||||||||||
seq2  GGAGGCAGCACTGTTCCAAGGACCTGCAGCCAATAGAA-TGGAAGAGCTG  191

seq1  AGACACAGTGTTCTTTCCATTGATGTGATAAATATCAAGACTGAAAAGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGTGTTCTTTCCATTGATGTGATAAATATCAAGACTGAAAAGAA  241

seq1  CTTGGCAAGAAAAGGGCTATTTTGGATTATACTTCTAGGTCACAATCCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAAGAAAAGGGCTATTTTGGATTATACTTCTAGGTCACAATCCAT  291

seq1  CACTGAGGAAAGTCAAGACAGGAACTCATGGCAGGAGCAGGAGGCAGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGGAAAGTCAAGACAGGAACTCATGGCAGGAGCAGGAGGCAGAAA  341

seq1  CCAGGAAGGGAATGCACTTTCTGGCTCCTTCACTTACTAACTCCTGCTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGGGAATGCACTTTCTGGCTCCTTCACTTACTAACTCCTGCTCA  391

seq1  GCTAGCTTTCTTCTATAGTCTCAGACCACCTGATGAGGAATGACGCCATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTTTCTTCTATAGTCTCAGACCACCTGATGAGGAATGACGCCATC  441

seq1  CATGGTGCACTGGACCCTCCTACATCAATCTTCATCAAGATAATGCCCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGCACTGGACCCTCCTACATCAATCTTCATCAAGATAATGCCCCC  491

seq1  AAGAACATGCCCATGAGCCATTTTGAATAGAACAATTCAATTGAGGTTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATGCCCATGAGCCATTTTGAATAGAACAATTCAATTGAGGTTTC  541

seq1  TCTTTCCAGGTAACTCTACATTGTGCCACATTGACAATAAAACCTAACCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGGTAACTCTACATTGTGCCACATTGACAATAAAACCTAACCA  591

seq1  AGATGGCCATGAATATCACTCAGCTCCTACCAAGCCAAGAGAGGGAAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCCATGAATATCACTCAGCTCCTACCAAGCCAAGAGAGGGAAAAT  641

seq1  ATTCATAATATCAGCGAGGTATTCCAATCAGCCATAAATATCAGCAGGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAATATCAGCGAGGTATTCCAATCAGCCATAAATATCAGCAGGGC  691

seq1  AGGAGCCTGTCAGCCACTCCACCTGCAAAACTTGCCTGACTTCCAAAATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCTGTCAGCCACTCCACCTGCAAAACTTGCCTGACTTCCAAAATC  741

seq1  CACAATGCAATTTGAAAATCCTTATATGTATACCCTTATCTACCCTACAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGCAATTTGAAAATCCTTATATGTATACCCTTATCTACCCTACAG  791

seq1  AAATCCTTGTACATGTGCATAAAACATTTCAAAGTAGAATTGTCTATCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTTGTACATGTGCATAAAACATTTCAAAGTAGAATTGTCTATCAT  841

seq1  TCTGAATTGGGAAGAAATGTAACTCCCAAACAGAGAAAAGTAGAAATCAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTGGGAAGAAATGTAACTCCCAAACAGAGAAAAGTAGAAATCAG  891

seq1  TACAGCAAAATAGCAATTTGCAAATATTATACACAAAATAATTTGATTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAAAATAGCAATTTGCAAATATTATACACAAAATAATTTGATTGT  941

seq1  CATAAAAAGTAGTGTTTCTTCTTTTTAATTTTTAAAATTTTATTTTGTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAAGTAGTGTTTCTTCTTTTTAATTTTTAAAATTTTATTTTGTGA  991

seq1  GTTTTGTATGAGTGGGGGTTGGGGTCAGGTCAGTCTCACGTGTTTTCATC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTATGAGTGGGGGTTGGGGTCAGGTCAGTCTCACGTGTTTTCATC  1041

seq1  TATCACTCTTCATTTTGCTTTTTAGGCAGGGTCTCTCATCAAATCTACAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTCTTCATTTTGCTTTTTAGGCAGGGTCTCTCATCAAATCTACAA  1091

seq1  CTCACTAATTGGCTAGTAAACTCCA  1124
      |||||||||||||||||||||||||
seq2  CTCACTAATTGGCTAGTAAACTCCA  1116

BAC Information

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BAC

BAC End Information

Alignment Information