BAC Information

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BAC

Clone NameB6Ng01-249O12
Chromosome7 (Build37)6 (Build37)
Map Location 115,112,613 - 115,113,82712,527,352 - 12,527,528
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneOlfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476
Downstream geneOlfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249O12.bB6Ng01-249O12.g
ACCGA057603GA057604
length1,2061,019
definitionB6Ng01-249O12.b B6Ng01-249O12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(115,112,613 - 115,113,827)(12,527,352 - 12,527,528)
sequence
gaattcaaaaacaatattgaaagatatgcatattttgaccacagggactt
tggtcttaattcttgagcaacttgagtactactttttaaaagaaaatgcc
aatttacaatcttaactattttctcttctttaggtcatatgtgtaaatgc
ccaaacatttctgggttaagaaacatgaaacttcaatatagtatatggat
tattttaggtgagacagtggctcaattttttccttgccatcatgactcct
ggctactaataagcattgagatcatatgaacagatgtgtctccaaaacca
ctgacaaaatagcccttggaggactgtattcttcctctttgcaaggtgct
aactggaaggaaaggaaacttgacttattcatggagatttctttctgaaa
agaggattattctcaatgaatgggagaaggaatgtcctcttaattctcag
agaacagctacacggttttcattttcactgtgtgagaagtccgtaccata
atttatttaattgtcttcatttttatacctatttaaatgcaataaatatt
cagatattagtagttttaaggctggaataatgtcataattaggcatttat
atctatcatttttcatttgttctattttctcctctgacaagtattctact
ctactatttcacttagtaaatcgtaaatattttttcgattagttattaaa
ataatatttccaagccctgatatctctagctctattgccctggggaatca
gattctaaatcttgcactaaaaggaaataaacactaacttaagtctgttc
tctggagttcccatataaatgcctttttcaccttagcttttccaggctca
tgatgaggtgatgaatgtctcagcaaaaaaatatactttctacaataaaa
ttgtgcactataccctgtagtatcatctctggtttattatataggatagg
ggcattaaatcccaatttcctcatagacccagattcatgattgatgtgga
gcattcatcaaatactttcattgtaaaatgttcttctaattgttacatgt
accatgatatcagagtctgattttatgttgttatttaatatggtaggatc
atagaaatttttaacaagtattgtatatccaacttaattccccaaagtta
ggaatgaagcagttcaggaattacctagtatagagtgtgcataaacctag
agtatt
gaattctcaccggaggaataccgaatggctgagaagcacctgaaaacatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggacgtggagaaagaggaacaccccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggctcctca
ggaaattggacatagcgctgccggaggaacccacaattcctctcctgagc
atatatccagaagatgtcccaaccggttaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaaactagaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggaatactactcagctattaaaaagaatgaatttatgaaattcctgggca
aatggatggaccttgagggcatcatgctgagtgaggtaacccaatcacaa
aggaactcgcaaaatatgtactcactgataagtggatattagcccagaaa
cttaggatacccaagatataaaatacaatttgctaaatgcatgaaattca
agaagaacgaagaccaaagtgtggacactttgccccttcttagaaatggg
aacaaaacacccatggaaggagttacagagacaaaatttggagctgtggc
gaaagaatggactatctagtgcttgccatatgcaaggatccatcccataa
tcagcttccaaacgctgacaccattgcatacactagcaagattttgctga
aaggacccagatatagctgtctcttgtgagactatgccggggcctagcaa
acatagaagtggatgatcacagtcagctattggatggatcacacggcccc
aatggaggagctagacaaagtacccaagaagctgacgtctgcacctatag
gtgacaacaatatgaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_115112613_115113827
seq2: B6Ng01-249O12.b_46_1251 (reverse)

seq1  AATA-TCTA-GTTTATGCACA-TCATAACTAGGTTATTCCTGGGAAAACT  47
      |||| |||| ||||||||||| ||   ||||||| |||||||    ||||
seq2  AATACTCTAGGTTTATGCACACTCTATACTAGGTAATTCCTG----AACT  46

seq1  GGCTTCATTCCT-ACTTTGGGGGAAATAAAGTTTTGATAT--CATACTTG  94
       ||||||||||| |||||||||  ||| ||| || |||||   |||||||
seq2  -GCTTCATTCCTAACTTTGGGG--AATTAAG-TTGGATATACAATACTTG  92

seq1  TAAAAATTTTCTATGATTCTACATATTTTAAAATACACATTAAAATCAGA  144
      | |||| |||||||||| ||||  || |||||  |||   ||||||||||
seq2  TTAAAAATTTCTATGATCCTAC-CATATTAAATAACAACATAAAATCAGA  141

seq1  CTTCTGATATCATGGTACATGTAACAATTTAGAAGAACATTTTTACAATG  194
      | ||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  C-TCTGATATCATGGTACATGTAACAA-TTAGAAGAACA-TTTTACAATG  188

seq1  AAAGTATTTTGATGAATGCTTCCACATCAATCATGAATCTGGGTCTATGA  244
      |||||| |||||||||||| ||||||||||||||||||||||||||||||
seq2  AAAGTA-TTTGATGAATGC-TCCACATCAATCATGAATCTGGGTCTATGA  236

seq1  GGAAATTGGGATTTAATGCCCCTATCCTATATAATAAACCAGAGATGATA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGGGATTTAATGCCCCTATCCTATATAATAAACCAGAGATGATA  286

seq1  CTACAGGGTATAGTGCACAATTTTATTGTAGAAAGTATATTTTTTTGCCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTACAGGGTATAGTGCACAATTTTATTGTAGAAAGTATATTTTTTTG-CT  335

seq1  GAGACATTCATCACCTCATCATGAGCCTGGAAAAGCTAAGGTGAAAAAGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATTCATCACCTCATCATGAGCCTGGAAAAGCTAAGGTGAAAAAGG  385

seq1  CATTTATATGGGAACTCCAGAGAACAGACTTAAGTTAGTGTTTATTTCCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATATGGGAACTCCAGAGAACAGACTTAAGTTAGTGTTTATTTCCT  435

seq1  TTTAGTGCAAGATTTAGAATCTGATTCCCCAGGGCAATAGAGCTAGAGAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGCAAGATTTAGAATCTGATTCCCCAGGGCAATAGAGCTAGAGAT  485

seq1  ATCAGGGCTTGGAAATATTATTTTAATAACTAATCGAAAAAATATTTACG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGCTTGGAAATATTATTTTAATAACTAATCGAAAAAATATTTACG  535

seq1  ATTTACTAAGTGAAATAGTAGAGTAGAATACTTGTCAGAGGAGAAAATAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTAAGTGAAATAGTAGAGTAGAATACTTGTCAGAGGAGAAAATAG  585

seq1  AACAAATGAAAAATGATAGATATAAATGCCTAATTATGACATTATTCCAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGAAAAATGATAGATATAAATGCCTAATTATGACATTATTCCAG  635

seq1  CCTTAAAACTACTAATATCTGAATATTTATTGCATTTAAATAGGTATAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAACTACTAATATCTGAATATTTATTGCATTTAAATAGGTATAAA  685

seq1  AATGAAGACAATTAAATAAATTATGGTACGGACTTCTCACACAGTGAAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGACAATTAAATAAATTATGGTACGGACTTCTCACACAGTGAAAA  735

seq1  TGAAAACCGTGTAGCTGTTCTCTGAGAATTAAGAGGACATTCCTTCTCCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACCGTGTAGCTGTTCTCTGAGAATTAAGAGGACATTCCTTCTCCC  785

seq1  ATTCATTGAGAATAATCCTCTTTTCAGAAAGAAATCTCCATGAATAAGTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGAGAATAATCCTCTTTTCAGAAAGAAATCTCCATGAATAAGTC  835

seq1  AAGTTTCCTTTCCTTCCAGTTAGCACCTTGCAAAGAGGAAGAATACAGTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCTTTCCTTCCAGTTAGCACCTTGCAAAGAGGAAGAATACAGTC  885

seq1  CTCCAAGGGCTATTTTGTCAGTGGTTTTGGAGACACATCTGTTCATATGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGGGCTATTTTGTCAGTGGTTTTGGAGACACATCTGTTCATATGA  935

seq1  TCTCAATGCTTATTAGTAGCCAGGAGTCATGATGGCAAGGAAAAAATTGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATGCTTATTAGTAGCCAGGAGTCATGATGGCAAGGAAAAAATTGA  985

seq1  GCCACTGTCTCACCTAAAATAATCCATATACTATATTGAAGTTTCATGTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTCTCACCTAAAATAATCCATATACTATATTGAAGTTTCATGTT  1035

seq1  TCTTAACCCAGAAATGTTTGGGCATTTACACATATGACCTAAAGAAGAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACCCAGAAATGTTTGGGCATTTACACATATGACCTAAAGAAGAGA  1085

seq1  AAATAGTTAAGATTGTAAATTGGCATTTTCTTTTAAAAAGTAGTACTCAA  1144
      ||||||||||||||||||                 |||||||||||||||
seq2  AAATAGTTAAGATTGTAANNNNNNNNNNNNNNNNNAAAAGTAGTACTCAA  1135

seq1  GTTGCTCAAGAATTAAGACCAAAGTCCCTGTGGTCAAAATATGCATATCT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCAAGAATTAAGACCAAAGTCCCTGTGGTCAAAATATGCATATCT  1185

seq1  TTCAATATTGTTTTTGAATTC  1215
      |||||||||||||||||||||
seq2  TTCAATATTGTTTTTGAATTC  1206

seq1: chr6_12527352_12527528
seq2: B6Ng01-249O12.g_918_1086

seq1  AAGGACCGTGATATAGCTGTCCCTTGTGAGGCTATGCCGGGGCCTAGCAA  50
      |||||||  |||||||||||| |||||||| |||||||||||||||||||
seq2  AAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAA  50

seq1  ACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGATCACAGGGCTCC  100
      ||| ||||||||||| ||||||||||||||||||||||||||| ||| ||
seq2  ACATAGAAGTGGATGATCACAGTCAGCTATTGGATGGATCACACGGC-CC  99

seq1  CAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTACAACC  150
      |||||||||||||||| |||||||||||| |||| | |   ||| ||  |
seq2  CAATGGAGGAGCTAGACAAAGTACCCAAGAAGCTGACG---TCTGCA--C  144

seq1  CTATAGGTGGAACAACATTATGAACTA  177
      |||||||||  |||||| |||||||||
seq2  CTATAGGTG--ACAACAATATGAACTA  169