BAC Information

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BAC

Clone NameB6Ng01-251A24
Chromosome6 (Build37)
Map Location 13,820,040 - 13,820,709
singlet/doubletsinglet
Overlap gene2610001J05Rik
Upstream geneLOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478, Tmem168, B630005N14Rik, Gpr85
Downstream geneLOC100041043, LOC100040513, LOC667797, Ppp1r3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251A24.bB6Ng01-251A24.g
ACCGA058431GA058432
length6701,175
definitionB6Ng01-251A24.b B6Ng01-251A24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttcaacgcaattgatcttagtcctcgcttcgctgcttttga
tcctgcctgttgttgaagcagtggaagctggagacgcgattgcactctta
ttaggtgtggttctcagcattaccggcatctgtgcttgcttggggatata
cgcaagaaagcgaaatggacagatgtgactctgaaggactcttctgaatt
agactgcaccctgaccagtgtgctgaaaaccattgttctgttgaggccga
ccccaagatttgatctctcccgttctcagcaagagggttacagttagctg
agagttaacactctcagttaagagatgctttcacgttcatacttgtttct
tctacaatgggggcagatgggagtggagggcagatgggagtggagggcgg
ctcttaacaacaaagagtgcactaataatgtggcccataacttgtatttg
ctgcttgggaaggggccaaagtgagagggcttaagtttgcaaaagtatta
tttcatactttcaagttgtcagagcacatggaattggaagatggaagtat
ttgttcagaatctagtaaatctatattgttataatcactgcctcttgcat
tctggggatctctctctctcactctcactctcactctctcagagaaccgg
ttggggtgggttttggattt

gaattcaaaagtaaagccatgacatttgcttctgggcttttctttgcgga
ggagattctgacttctggtgcttgcttatttttagtcagcactatcttct
ctcttttcctgacatagtttttgcaagttgcacattcatgtgaatttatc
cacttctagattatctagttagtgtatgtgactttccataggtgctctta
tgaacctgtatatttcagtagtaccaactacaatgtttctacctacatta
tatagtttcaagagtcctctttctgttagtttgaataaaaaattgccaat
atctttttatgttgagaaattacattcatttttataagctattgatttcc
tgatttctatttcatttgtttctgccctactttttattaattatttcccc
cagctttggatatttagacattattctttttctagttagcttaggtataa
aattaggttgtttatttgagatcatttttttttctttcttaatttcccta
gttttaataaattttatgtactagatttccatctttagttatctcaacat
attttctattgcttttgtaatttcctttactgtgccattggttgtcagga
gggttttgtgtaatcccaatcattctgttagtctctctctctctctctct
ctctctctctctctctctcacacacacacacacacacacacacacacata
cacacacacatacacacacacacacgataagactaaaggcatgctccacc
acagccaactccacttctctgttattcttgatttttaggttcatactaca
gtggtatgaaaaaacacttgacatgttttaacttttgctgaaactttaag
ggcttgctttgtagactaatttatgatctgttcagaaggatgccccatgc
gcgcttgagaaggctgaacattctttgggtatgtctctcgagtccatttg
gtggcatttaatccctttcttttatactgattttttgatcacatgagagt
ggatcttaaacccctgtccatctcgtttgctcataatacttacttaaatt
ttattttctcactagaatacacgcttcattatctgctaactgtagttata
tgcctcctcagataagtgaccccttatcatgaatgatggtccaatgtggt
actatattttgagagagctcgttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_13820040_13820709
seq2: B6Ng01-251A24.b_45_714 (reverse)

seq1  AAATCCAAAACCCACCCCAACCGGTTCTCTGAGAGAGTGAGAGTGAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAAACCCACCCCAACCGGTTCTCTGAGAGAGTGAGAGTGAGAGT  50

seq1  GAGAGAGAGAGATCCCCAGAATGCAAGAGGCAGTGATTATAACAATATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGATCCCCAGAATGCAAGAGGCAGTGATTATAACAATATAG  100

seq1  ATTTACTAGATTCTGAACAAATACTTCCATCTTCCAATTCCATGTGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTAGATTCTGAACAAATACTTCCATCTTCCAATTCCATGTGCTCT  150

seq1  GACAACTTGAAAGTATGAAATAATACTTTTGCAAACTTAAGCCCTCTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTTGAAAGTATGAAATAATACTTTTGCAAACTTAAGCCCTCTCAC  200

seq1  TTTGGCCCCTTCCCAAGCAGCAAATACAAGTTATGGGCCACATTATTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCCCTTCCCAAGCAGCAAATACAAGTTATGGGCCACATTATTAGT  250

seq1  GCACTCTTTGTTGTTAAGAGCCGCCCTCCACTCCCATCTGCCCTCCACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTTTGTTGTTAAGAGCCGCCCTCCACTCCCATCTGCCCTCCACTC  300

seq1  CCATCTGCCCCCATTGTAGAAGAAACAAGTATGAACGTGAAAGCATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGCCCCCATTGTAGAAGAAACAAGTATGAACGTGAAAGCATCTCT  350

seq1  TAACTGAGAGTGTTAACTCTCAGCTAACTGTAACCCTCTTGCTGAGAACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGAGTGTTAACTCTCAGCTAACTGTAACCCTCTTGCTGAGAACG  400

seq1  GGAGAGATCAAATCTTGGGGTCGGCCTCAACAGAACAATGGTTTTCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATCAAATCTTGGGGTCGGCCTCAACAGAACAATGGTTTTCAGCA  450

seq1  CACTGGTCAGGGTGCAGTCTAATTCAGAAGAGTCCTTCAGAGTCACATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTCAGGGTGCAGTCTAATTCAGAAGAGTCCTTCAGAGTCACATCT  500

seq1  GTCCATTTCGCTTTCTTGCGTATATCCCCAAGCAAGCACAGATGCCGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTTCGCTTTCTTGCGTATATCCCCAAGCAAGCACAGATGCCGGTA  550

seq1  ATGCTGAGAACCACACCTAATAAGAGTGCAATCGCGTCTCCAGCTTCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGAACCACACCTAATAAGAGTGCAATCGCGTCTCCAGCTTCCAC  600

seq1  TGCTTCAACAACAGGCAGGATCAAAAGCAGCGAAGCGAGGACTAAGATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAACAACAGGCAGGATCAAAAGCAGCGAAGCGAGGACTAAGATCA  650

seq1  ATTGCGTTGAAACTGAATTC  670
      ||||||||||||||||||||
seq2  ATTGCGTTGAAACTGAATTC  670


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