BAC Information

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BAC

Clone NameB6Ng01-251I08
Chromosome6 (Build37)
Map Location 85,966,663 - 86,140,421
singlet/doubletdoublet
Overlap geneFigla, Add2
Upstream geneExoc6b, Npm3-ps1, EG545861, EG623016, Spr, LOC665086, LOC665089, Emx1, Sfxn5, Rab11fip5, Noto, Smyd5, 1700040I03Rik, Cct7, Fbxo41, Egr4, Alms1, LOC100043497, EG665134, LOC100043493, Cml3, LOC623273, Cml5, Cml4, LOC100043504, LOC100043508, Cml2, LOC665177, 1700019G17Rik, Cml1, Tprkb, EG434057, LOC665213, Dusp11
Downstream geneTgfa, LOC665233, LOC100043094, LOC100043527, 2010309E21Rik, Snrpg, Pcyox1, Tia1, C87436, 2310040G24Rik, Pcbp1, Asprv1, Mxd1, 2610209M04Rik, Gmcl1, Anxa4, 2610306M01Rik, Aak1, LOC100043555, Nfu1, Gfpt1, D6Ertd527e, Antxr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251I08.bB6Ng01-251I08.g
ACCGA058761GA058762
length896927
definitionB6Ng01-251I08.b B6Ng01-251I08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,139,529 - 86,140,421)(85,966,663 - 85,967,576)
sequence
gaattcttagccattcctatggaaaagtcccaaatctactacctggaaac
ccttaagcaggttcagctcgtgatgctgacagaaacagtgatgctcagaa
gtaagagggtggggtagtggagggagaaagaaggcaggggaggtggctca
gtcatcagagcgcttgctatggaagtttgaagacctagaatccatcccta
gataatgtacacacacacacacacacatgcacacacgcatacatgcacat
tacaggcatgcacctgtaactccagcacagtggagaaaagagagcgctgg
gtccctgggactctccagtgtagtctacttgtcaagttctaagccaatga
gagatgcagttaacaaatgaacagcacctcaggaaccaaggttgtcctgt
ggttgcctcacacagttatgcacatgggcacacacacacacacacacaca
cacacacacacacacacacctaaagataaaggacagaaaaatcaaggcaa
atgggacttgctcatcactacccgatgaactcaataaattctccctaagg
tcaaaggaaaggggaaatgaaaaacaggacagataagacagacaacagtc
aaaatatttttaacaggatgctcaggaagacagcagagggtgacaaagga
gactctggtcttctgtcccaaaccagaggtagcaagaaggagggaggaga
tatatctcacatctccatggagatggagacttcgttcagagagactgcaa
atatcagacatatctgtactgacaggccagtgtgtcctcacagccaactt
tcatattgcatgaaggagcatgtgggaagcaagtgacagaagtggcgcct
atggcactggatcaatagctgcgagaggagagatcagacaccagag
gaattcagaggcaactttccaggctcaggtgcctcaagctttttgattgc
agacgtccacgtgccagccctggtgcctcctaccctcattcaggccttgc
aggccagagtgtaagaccctttcatcatggcctctccaggggcttttcac
caccacctgctcccggcaaccccaccctggcccctcttcgcgcaaccaaa
ccatgagcaaaggtgtacagccttcttgacctcagttgccttggcaactc
cagagcctccttcctcctcctcttaccctctcagggcccagaccctctac
aagctccttccatccaaggctccgcctcctccgcaacccacctcgcactc
aggtgcgtcaagtgtgtcacagttaagctccttgcgcatgggcctctctc
ccccacctcatggcctcctcatgccccgcccctcctcagctcatgccccg
cccctccacctcgtgccctcgcatgccccgccccctctacctcgtgccct
cgcatgccccgccccctccgaggcttggaacacctgaggcgcccaggtgc
ctctgctgcccgtggtcttgaccaccatggatacagcacctgcatcccca
gagccctttcctggtcactccgcaggctgaggtgctggaggagctgattc
aggcccagatggggcccctgccccggctcgccgccatctgtaggctcaag
cgcctgccctcaggcggctactccaccacggatgactctgcatctggtgt
ttggagcgcaggcgtgtggccaacgccaaagagcgtgaacgggtgaggac
ccagggccaccttattgccactgccatgctcgtgggtgcttcaatattcc
gacaactgtgcatttccttctctgccctccttgggtgaactttcgttttt
ctcgagggcttggtccaaggttcccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_86139529_86140421
seq2: B6Ng01-251I08.b_48_943 (reverse)

seq1  CTCTGGTGTCTGATCTCTCCTCTCGCAGCTTTTGGT-CAGTGCCATAGGC  49
      |||||||||||||||||||||||||||||| ||| | |||||||||||||
seq2  CTCTGGTGTCTGATCTCTCCTCTCGCAGCTATTGATCCAGTGCCATAGGC  50

seq1  GCCAC-TCTGTC-CTTGCTTCCCACATGCTCC-TCATGCAATTTGAAAGT  96
      ||||| |||||| ||||||||||||||||||| ||||||||| |||||||
seq2  GCCACTTCTGTCACTTGCTTCCCACATGCTCCTTCATGCAATATGAAAGT  100

seq1  TGGCTGTGAGGACACACTTGCCTGTCAGTACAGATATGTCCTGATATTTG  146
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  TGGCTGTGAGGACACACTGGCCTGTCAGTACAGATATGT-CTGATATTTG  149

seq1  CAGTCTCTCTGAACGAAGTCTCCATCTCCATGGAGATGTGAGATATATCT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTCTGAACGAAGTCTCCATCTCCATGGAGATGTGAGATATATCT  199

seq1  CCTCCCTCCTTCCTGCTACCTCTGGTTTGGGACAGAAGACCAGAGTCTCC  246
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCTTCTTGCTACCTCTGGTTTGGGACAGAAGACCAGAGTCTCC  249

seq1  TTTGTCACCCTCTGCTGTCTTCCTGAGCATCCTGTTAAAAATATTTTGAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACCCTCTGCTGTCTTCCTGAGCATCCTGTTAAAAATATTTTGAC  299

seq1  TGTTGTCTGTCTTATCTGTCCTGTTTTTCATTTCCCCTTTCCTTTGACCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCTGTCTTATCTGTCCTGTTTTTCATTTCCCCTTTCCTTTGACCT  349

seq1  TAGGGAGAATTTATTGAGTTCATCGGGTAGTGATGAGCAAGTCCCATTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGAATTTATTGAGTTCATCGGGTAGTGATGAGCAAGTCCCATTTG  399

seq1  CCTTGATTTTTCTGTCCTTTATCTTTAGGTGTGTGTGTGTGTGTGTGTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATTTTTCTGTCCTTTATCTTTAGGTGTGTGTGTGTGTGTGTGTGT  449

seq1  GTGTGTGTGTGTGTGTGTGCCCATGTGCATAACTGTGTGAGGCAACCACA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGCCCATGTGCATAACTGTGTGAGGCAACCACA  499

seq1  GGACAACCTTGGTTCCTGAGGTGCTGTTCATTTGTTAACTGCATCTCTCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAACCTTGGTTCCTGAGGTGCTGTTCATTTGTTAACTGCATCTCTCA  549

seq1  TTGGCTTAGAACTTGACAAGTAGACTACACTGGAGAGTCCCAGGGACCCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTAGAACTTGACAAGTAGACTACACTGGAGAGTCCCAGGGACCCA  599

seq1  GCGCTCTCTTTTCTCCACTGTGCTGGAGTTACAGGTGCATGCCTGTAATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCTCTTTTCTCCACTGTGCTGGAGTTACAGGTGCATGCCTGTAATG  649

seq1  TGCATGTATGCGTGTGTGCATGTGTGTGTGTGTGTGTGTACATTATCTAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTATGCGTGTGTGCATGTGTGTGTGTGTGTGTGTACATTATCTAG  699

seq1  GGATGGATTCTAGGTCTTCAAACTTCCATAGCAAGCGCTCTGATGACTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGATTCTAGGTCTTCAAACTTCCATAGCAAGCGCTCTGATGACTGA  749

seq1  GCCACCTCCCCTGCCTTCTTTCTCCCTCCACTACCCCACCCTCTTACTTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTCCCCTGCCTTCTTTCTCCCTCCACTACCCCACCCTCTTACTTC  799

seq1  TGAGCATCACTGTTTCTGTCAGCATCACGAGCTGAACCTGCTTAAGGGTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATCACTGTTTCTGTCAGCATCACGAGCTGAACCTGCTTAAGGGTT  849

seq1  TCCAGGTAGTAGATTTGGGACTTTTCCATAGGAATGGCTAAGAATTC  893
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTAGTAGATTTGGGACTTTTCCATAGGAATGGCTAAGAATTC  896

seq1: chr6_85966663_85967576
seq2: B6Ng01-251I08.g_68_994

seq1  GAATTCAGAGGCAACTTTCCAGGCTCAGGTGCCTCAAGCTTTTTGATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGCAACTTTCCAGGCTCAGGTGCCTCAAGCTTTTTGATTGC  50

seq1  AGACGTCCACGTGCCAGCCCTGGTGCCTCCTACCCTCATTCAGGCCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTCCACGTGCCAGCCCTGGTGCCTCCTACCCTCATTCAGGCCTTGC  100

seq1  AGGCCAGAGTGTAAGACCCTTTCATCATGGCCTCTCCAGGGGCTTTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGAGTGTAAGACCCTTTCATCATGGCCTCTCCAGGGGCTTTTCAC  150

seq1  CACCACCTGCTCCCGGCAACCCCACCCTGGCCCCTCTTCGCGCAACCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCTGCTCCCGGCAACCCCACCCTGGCCCCTCTTCGCGCAACCAAA  200

seq1  CCATGAGCAAAGGTGTACAGCCTTCTTGACCTCAGTTGCCTTGGCAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGCAAAGGTGTACAGCCTTCTTGACCTCAGTTGCCTTGGCAACTC  250

seq1  CAGAGCCTCCTTCCTCCTCCTCTTACCCTCTCAGGGCCCAGACCCTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTCCTTCCTCCTCCTCTTACCCTCTCAGGGCCCAGACCCTCTAC  300

seq1  AAGCTCCTTCCATCCAAGGCTCCGCCTCCTCCGCAACCCACCTCGCACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCTTCCATCCAAGGCTCCGCCTCCTCCGCAACCCACCTCGCACTC  350

seq1  AGGTGCGTCAAGTGTGTCACAGTTAAGCTCCTTGCGCATGGGCCTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCGTCAAGTGTGTCACAGTTAAGCTCCTTGCGCATGGGCCTCTCTC  400

seq1  CCCCACCTCATGGCCTCCTCATGCCCCGCCCCTCCTCAGCTCATGCCCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCTCATGGCCTCCTCATGCCCCGCCCCTCCTCAGCTCATGCCCCG  450

seq1  CCCCTCCACCTCGTGCCCTCGCATGCCCCGCCCCCTCTACCTCGTGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCACCTCGTGCCCTCGCATGCCCCGCCCCCTCTACCTCGTGCCCT  500

seq1  CGCATGCCCCGCCCCCTCCGAGGCTTGGAACACCTGAGGCGCCCAGGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATGCCCCGCCCCCTCCGAGGCTTGGAACACCTGAGGCGCCCAGGTGC  550

seq1  CTCTGCTGCCCGTGGTCTTGACCACCATGGATACAGCACCTGCATCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTGCCCGTGGTCTTGACCACCATGGATACAGCACCTGCATCCCCA  600

seq1  GAGCCC-TTCCTGGTCACTCCGCAGGCTGAGGTGCTGGAGGAGCTGATTC  649
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTTTCCTGGTCACTCCGCAGGCTGAGGTGCTGGAGGAGCTGATTC  650

seq1  AGGCCCAGATGGGGCCCCTGCCCCGGCTCGCCGCCATCTGTAGGCTCAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAGATGGGGCCCCTGCCCCGGCTCGCCGCCATCTGTAGGCTCAAG  700

seq1  CGCCTGCCCTCAGGCGGCTACTCCACCACGGATGAC-CTGCATCTGGTG-  747
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  CGCCTGCCCTCAGGCGGCTACTCCACCACGGATGACTCTGCATCTGGTGT  750

seq1  TTGGAGCGCAGGCGTGTGGCCAACGCCAAAGAGCGTGAACGGGTGAGGAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCGCAGGCGTGTGGCCAACGCCAAAGAGCGTGAACGGGTGAGGAC  800

seq1  CCAGGGCCACCTTATTGCCACTGCCATGCTCGTGGGTGC-TCAATA-TCC  845
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  CCAGGGCCACCTTATTGCCACTGCCATGCTCGTGGGTGCTTCAATATTCC  850

seq1  GACAACTGTGCATTTCC-TCTCTGCCCTCC-TGGGTGA--CTTCG-TTTT  890
      ||||||||||||||||| |||||||||||| |||||||   |||| ||||
seq2  GACAACTGTGCATTTCCTTCTCTGCCCTCCTTGGGTGAACTTTCGTTTTT  900

seq1  CTCGA-GGCTTGGTCCA--GGTCCCCA  914
      ||||| |||||||||||  | ||||||
seq2  CTCGAGGGCTTGGTCCAAGGTTCCCCA  927