BAC Information

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BAC

Clone NameB6Ng01-251K24
Chromosome6 (Build37)
Map Location 34,962,835 - 34,985,321
singlet/doubletdoublet
Overlap genenone
Upstream geneLrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik
Downstream geneCnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251K24.bB6Ng01-251K24.g
ACCGA058881GA058882
length1,113911
definitionB6Ng01-251K24.b B6Ng01-251K24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,962,835 - 34,963,960)(34,984,411 - 34,985,321)
sequence
gaattctagattaggaaaaaatgtccgggtcatttagttcaatctcgctt
ttaaatgataacaagacttccctttaccttctgttctcacttggctgagt
gtcctccagtgccccttggtccccagggtggtgctactggaagatggagg
ggccttcaggaggcatagagccttgtgggcagtccttgggcagctggagg
tacccactacatgtggttttgagagacttaagtctttctttttctctatg
ttgattgttggcccatggcataagctgtttattgaccctttattcccatg
atgtatgccactccccagagactcagcaaatggaactccaaggccaaaga
aactgtttctaagtctcaagcatcttgcaagcacagcacaaagcagactt
ctacactattctgtcgtccttgttcccttccttcactagacctctcttga
gtttcttcctaggtcttattggggcctgcaaaaatggtccaatttctctt
gttcctcttcttccactagttcagttcctgcaatccattaagctttttct
ttctctctttcttcctttcttcctttctttctttctttctttctttcttt
ctttctttctttctttcttccttccttccttccttccttccttcctttct
ttctttctttctttctttcttttctttctttttttagttttttgagacag
ggctctctgtgtagctctgactcacactaagctcttccttgtaccagcag
taacaggtcatttaattatttctaatattcactgatcaggtaaaatgcta
agtacttgatacagagtcttgtatttaagcctcctcacgaccctaacagc
tctatacaacctgttagcctggggcttgtttataggttcacacatcttac
cttgcccagggtcaccacactgggaaacagtgacacccggcaatgacatc
aaagcagcttgaatctgtgactctcaaaagcatctactgtggattccatc
ttacttatccttcttctgctcgtcacatcatacactctcacatactaaac
aagtcagggtcgagtcagcatgctcagagcatgccttacaatcagcctct
tcatgccaactgg
gaattcatcagagtcttttgaaattgctgccctgcacaggaggattggct
tctgtgtactggaaaggatgtgttcttactaggacagactgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaataacaagtttaata
attacaattatgcagcataaacatacatgatagtaatcaataccaagtca
tgtgttgttcacggattgccctcttctttacattgaaaatcacttgaaaa
tttgaagcagaaaaggtttcattttagccttgtaaataaataagagaaag
gaaaagcaaaataaccttttaaaaacaacaaagcctgtgtgctttagttt
cacagctgaactggaaattagagatttcccatgtcctccatggccccaca
catgtaaagctcctccattgtcggtgtgttccagttgaggaacctacagt
gatacagcactgccacccagagtctttgtacgagggctgctcactcatgc
tgctgtacacttctgcagaactagacaattgtgagtgacctgtcgatcat
tgagctagcctgatactcctctgtactgtgttcatgcatcgccccccttt
taagtcactgggctgtgcatactgtccctgtagtttttcctgttacattt
tggtctttggaatagctttttagcttatcttctttcacctattaatatac
atttgtttcctctagtctttgttcccttagcgcacgtatttagtgaactt
tcagtatgtacatgtttgttggcagaaaatgagcatttgttacaccagcc
aatcccaaccttaaaaaatgcctctggatttgcaaaacttttccacgggg
agaacctttggagtgtgtgagtgattgttaacactgcgtctggagctgta
tgagttcatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_34962835_34963960
seq2: B6Ng01-251K24.b_50_1162

seq1  GAATTCTAGATTAGGAAAAAATGTCCGGGTCATTTAGTTCAATCTCGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATTAGGAAAAAATGTCCGGGTCATTTAGTTCAATCTCGCTT  50

seq1  TTAAATGATAACAAGACTTCCCTTTACCTTCTGTTCTCACTTGGCTGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGATAACAAGACTTCCCTTTACCTTCTGTTCTCACTTGGCTGAGT  100

seq1  GTCCTCCAGTGCCCCTTGGTCCCCAGGGTGGTGCTACTGGAAGATGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCAGTGCCCCTTGGTCCCCAGGGTGGTGCTACTGGAAGATGGAGG  150

seq1  GGCCTTCAGGAGGCATAGAGCCTTGTGGGCAGTCCTTGGGCAGCTGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCAGGAGGCATAGAGCCTTGTGGGCAGTCCTTGGGCAGCTGGAGG  200

seq1  TACCCACTACATGTGGTTTTGAGAGACTTAAGTCTTTCTTTTTCTCTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACTACATGTGGTTTTGAGAGACTTAAGTCTTTCTTTTTCTCTATG  250

seq1  TTGATTGTTGGCCCATGGCATAAGCTGTTTATTGACCCTTTATTCCCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGTTGGCCCATGGCATAAGCTGTTTATTGACCCTTTATTCCCATG  300

seq1  ATGTATGCCACTCCCCAGAGACTCAGCAAATGGAACTCCAAGGCCAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGCCACTCCCCAGAGACTCAGCAAATGGAACTCCAAGGCCAAAGA  350

seq1  AACTGTTTCTAAGTCTCAAGCATCTTGCAAGCACAGCACAAAGCAGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTTCTAAGTCTCAAGCATCTTGCAAGCACAGCACAAAGCAGACTT  400

seq1  CTACACTATTCTGTCGTCCTTGTTCCCTTCCTTCACTAGACCTCTCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTATTCTGTCGTCCTTGTTCCCTTCCTTCACTAGACCTCTCTTGA  450

seq1  GTTTCTTCCTAGGTCTTATTGGGGCCTGCAAAAATGGTCCAATTTCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTCCTAGGTCTTATTGGGGCCTGCAAAAATGGTCCAATTTCTCTT  500

seq1  GTTCCTCTTCTTCCACTAGTTCAGTTCCTGCAATCCATTAAGCTTTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCTTCTTCCACTAGTTCAGTTCCTGCAATCCATTAAGCTTTTTCT  550

seq1  TTCTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTTCTTCCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTT  600

seq1  CTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCT  650

seq1  TTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTTTAGTTTTTTGAGACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTTTAGTTTTTTGAGACAG  700

seq1  GGCTCTCTGTGTAGCTCTGACTCACACTAAGCTCTTCCTTGTACCAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCTGTGTAGCTCTGACTCACACTAAGCTCTTCCTTGTACCAGCAG  750

seq1  TAACAGGTCATTTAATTATTTCTAATATTCACTGATCAGGTAAAATGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGTCATTTAATTATTTCTAATATTCACTGATCAGGTAAAATGCTA  800

seq1  AGTACTTGATACAGAGTCTTGTATTTAAGCCTCCTCACGACCCTAACAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTGATACAGAGTCTTGTATTTAAGCCTCCTCACGACCCTAACAGC  850

seq1  TCTATACAACCTGTTAGCCTGGGGCTTGTTTATAGGTTCACACATCTTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACAACCTGTTAGCCTGGGGCTTGTTTATAGGTTCACACATCTTAC  900

seq1  CTTGCCCAGGGTCACCACACT-GGAAACAGTGACA-CCGGCAATGACATC  948
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  CTTGCCCAGGGTCACCACACTGGGAAACAGTGACACCCGGCAATGACATC  950

seq1  AAAGCAGCTTGAATCTGTGACTCTCAAAAGCATCTACTGTGGATTCCATC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCTTGAATCTGTGACTCTCAAAAGCATCTACTGTGGATTCCATC  1000

seq1  TTACTTATCCTTCTTCCTGCTTCCGTTCAACCATCATAACCACTCTCACA  1048
      ||||||||||||||| |||||  || |||  |||||||  ||||||||||
seq2  TTACTTATCCTTCTT-CTGCT--CG-TCA--CATCATA--CACTCTCACA  1042

seq1  TACTAAACAAGGCCAGGGTCGAGGCCAGGCATGCTCAGAGCCATGCCCTA  1098
      |||||||||| | |||||||||| |   |||||||||||| |||| ||| 
seq2  TACTAAACAA-GTCAGGGTCGAGTC--AGCATGCTCAGAG-CATG-CCTT  1087

seq1  ACCATCAGCCCTCTTCCATGGCAACTGG  1126
      || ||||| |||||| |||| |||||||
seq2  ACAATCAG-CCTCTT-CATGCCAACTGG  1113

seq1: chr6_34984411_34985321
seq2: B6Ng01-251K24.g_67_977 (reverse)

seq1  CCATG-ACTCATACAGCTCCAGACGCAGTGTAACAAATCACTCACACACT  49
      ||||| ||||||||||||||||||||||||| |  |||||||||||||||
seq2  CCATGAACTCATACAGCTCCAGACGCAGTGTTAACAATCACTCACACACT  50

seq1  CCAAAGGTTTCTCACCGTTGGAAAAGTTTTGCAAATCCAGAGGCATTTTT  99
      ||||||| ||||| ||| ||||||||||||||||||||||||||||||||
seq2  CCAAAGG-TTCTCCCCG-TGGAAAAGTTTTGCAAATCCAGAGGCATTTTT  98

seq1  TAAGGTTTGGGATTGGCTGGTGTAACAAATGCTCATTTTCTGCCAACAAA  149
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGG-TTGGGATTGGCTGGTGTAACAAATGCTCATTTTCTGCCAACAAA  147

seq1  CATGTACATACTGAAAGTTCACTAAATACGTGCGCTAAGGGAACAAAGAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACATACTGAAAGTTCACTAAATACGTGCGCTAAGGGAACAAAGAC  197

seq1  TAGAGGAAACAAATGTATATTAATAGGTGAAAGAAGATAAGCTAAAAAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAAACAAATGTATATTAATAGGTGAAAGAAGATAAGCTAAAAAGC  247

seq1  TATTCCAAAGACCAAAATGTAACAGGAAAAACTACAGGGACAGTATGCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAAAGACCAAAATGTAACAGGAAAAACTACAGGGACAGTATGCAC  297

seq1  AGCCCAGTGACTT-AAAGGGGGGCGATGCATGAACACAGTACAGAGGAGT  348
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGTGACTTAAAAGGGGGGCGATGCATGAACACAGTACAGAGGAGT  347

seq1  ATCAGGCTAGCTCAATGATCGACAGGTCACTCACAATTGTCTAGTTCTGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCTAGCTCAATGATCGACAGGTCACTCACAATTGTCTAGTTCTGC  397

seq1  AG-AGTGTACAGCAGCATGAGTGAGCAGCCCTCGTACAAAGACTCTGGGT  447
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTACAGCAGCATGAGTGAGCAGCCCTCGTACAAAGACTCTGGGT  447

seq1  GGCAGTGCTGTATCACTGTAGGTTCCTCAACTGGAACACACCGACAATGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGCTGTATCACTGTAGGTTCCTCAACTGGAACACACCGACAATGG  497

seq1  AGGAGCTTTACATGTGTGGGGCCATGGAGGACATGGGAAATCTCTAATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTTTACATGTGTGGGGCCATGGAGGACATGGGAAATCTCTAATTT  547

seq1  CCAGTTCAGCTGTGAAACTAAAGCACACAGGCTTTGTTGTTTTTAAAAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCAGCTGTGAAACTAAAGCACACAGGCTTTGTTGTTTTTAAAAGG  597

seq1  TTATTTTGCTTTTCCTTTCTCTTATTTATTTACAAGGCTAAAATGAAACC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGCTTTTCCTTTCTCTTATTTATTTACAAGGCTAAAATGAAACC  647

seq1  TTTTCTGCTTCAAATTTTCAAGTGATTTTCAATGTAAAGAAGAGGGCAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCTTCAAATTTTCAAGTGATTTTCAATGTAAAGAAGAGGGCAAT  697

seq1  CCGTGAACAACACATGACTTGGTATTGATTACTATCATGTATGTTTATGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGAACAACACATGACTTGGTATTGATTACTATCATGTATGTTTATGC  747

seq1  TGCATAATTGTAATTATTAAACTTGTTATTACACACACACACACACACAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATTGTAATTATTAAACTTGTTATTACACACACACACACACACAC  797

seq1  ACACACACACACACACACACACACAGTCTGTCCTAGTAAGAACACATCCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACAGTCTGTCCTAGTAAGAACACATCCT  847

seq1  TTCCAGTACACAGAAGCCAATCCTCCTGTGCAGGGCAGCAATTTCAAAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTACACAGAAGCCAATCCTCCTGTGCAGGGCAGCAATTTCAAAAG  897

seq1  ACTCTGATGAATTC  911
      ||||||||||||||
seq2  ACTCTGATGAATTC  911