BAC Information

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BAC

Clone NameB6Ng01-252J04
Chromosome6 (Build37)
Map Location 75,275,153 - 75,276,115
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306
Downstream geneLOC100042942, LOC668143, EG668145, EG546907, LOC100042952
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252J04.bB6Ng01-252J04.g
ACCGA059530GA059531
length1,159970
definitionB6Ng01-252J04.b B6Ng01-252J04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgaactgagcttcactaactgaactagctgtatgaaacagaa
ctgcagaatctcaactgaactcaactgttttcaacttaaatataccaaac
tgaactcaacctaactccattccattgacataattaactgcttatactca
ctgacctgtcctccattctgactcactttgtgatattcttgagtagtctc
tctttcctgtctattctcttgagagttgggcatatttgactacctctgac
ttattttgtcaaatctttctgtgattcatcactttgtctgtacctagatt
aggcaacattttaaatatggctgcttccttctacaaattaacattacctt
cattgtttgggattaatgttgtgtacaaagggtgtgcctatattccaacc
agaaagattaaagttgtgtcattctattggaatcacatgttatcatttgc
cagagtagccatgttgctgtattaaaagtctctacatcttccctctttct
gtttaagctaaatatcatacatagtttaactattacaaaagaaacaacta
tcaatcccataaattcaacactccaaatgtttaaataaagatccattgat
aaaatgaccctttataactgttgttctgctcacctatcagcaaagatcca
tttcagcatctctgatgaccaatctgtcctttttagccagtttgttgagc
agtcccatgaaggcatcaactttctgcatagtctaagttggtgtctctgt
gtctcttctttccttaagtcatatggaagtttttcttacttggattgaat
ctttatccattttaatgaaactcgtagtctttcataggccaaaactcttc
cccagtgtagcaattctctgacttccattctgataataaagcacatggaa
agtatacagattgatctaattcagcaggtgttttttttttttttctttct
acagtccattgctttttttttttttttttttgggtattgggtttttgttg
ttggttggtttgatttgaatttaaccaggccctgtcccattgtttgggaa
ttcaacagtggcaggaatttaccttatagtaattcatgtctttactttac
tagcagctatctaggcacaccactacatgctcctttctgcttacagatag
ggtctcagc
gaattctgtttgggaaaattttattgagtattttttattgatattcataa
gtgaaataagtctgaagttctctttcttggttgggtttgtgtgtgtgtgg
tttatatttcagagtagctgttgattcacagaatgagttaggttgtgttc
ttctgtttctattatgtggaacagtttgaggaatgttggtattagctctt
ttgtgaagatctggtggaattctgcactaccaccatctggccttgggatg
gttttagttgggaggattttaatgatttcttctatttctttagggtatag
agaatagtttagatatatgtaaagataacctcagaaggtaaacaaaaaat
taaacaaatggaaagtgacattaaacatttctttaccttctttcccaggt
tattccatctgcataccattaaacaatatccttttagcttacaacatata
acactgggctggatttttatattttataaataagagacaatttaaaaagt
gagttcacaaaagaactcacttgatatgcactcactgataagtggatatt
agcccagaaacctaaaatacccaagatacaatttgtaagaaaaatcaaga
agaaggaagaccaatgcttggatagttcattctgccttagaataaggaac
aaaattcccatgaaaagagttacagagacaaagtttggatctgagatgaa
aggatggaccatccagagatgccccacctgggggatccatcccataatca
gacaccaaactgagatactatttttgattttgatgaagggaccctgatat
agaccagtggcctggccaaatacagaaagtggatgctcacagtcatctat
aagatggaacacaggacccccaattggagaagctagaagaagcacccaag
gagctgaaaggagtctaccaccctaaaggtggcacaacaataggaaatac
cagtaccccccagaaattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75275153_75276115
seq2: B6Ng01-252J04.g_69_1038 (reverse)

seq1  ACAAATTCT-GGGGGTACTGGTTATTTCTTATTGTTGTGCCACCTCTAGG  49
      |||| |||| ||||||||||| |||||| |||||||||||||||| ||||
seq2  ACAATTTCTGGGGGGTACTGG-TATTTCCTATTGTTGTGCCACCTTTAGG  49

seq1  GTGGTAGACTCC-TTCAGCTCCTTGGGTGCTTTCTCTAGCTTCTCC-ATT  97
      |||||||||||| |||||||||||||||||||  |||||||||||| |||
seq2  GTGGTAGACTCCTTTCAGCTCCTTGGGTGCTTCTTCTAGCTTCTCCAATT  99

seq1  GGGGGTCCTGTGTTCCATCTTATAGATGACTGTGAGCATCCAC-TTCTGT  146
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGGGGTCCTGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTTCTGT  149

seq1  ATTT-GCCAGG-CACTGGTCTATATCAGGGTCCCTTCATCAAAATC-AAA  193
      |||| |||||| |||||||||||||||||||||||||||||||||| |||
seq2  ATTTGGCCAGGCCACTGGTCTATATCAGGGTCCCTTCATCAAAATCAAAA  199

seq1  ATAGTATCTCAGTTTGGTGTCTGATTATGGGATGGAT-CCCCAGGTGGGG  242
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATAGTATCTCAGTTTGGTGTCTGATTATGGGATGGATCCCCCAGGTGGGG  249

seq1  CATCTCTGGATGGTCCATCCTTTCATCTCAGATCCAAACTTTGTCTCTGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGGATGGTCCATCCTTTCATCTCAGATCCAAACTTTGTCTCTGT  299

seq1  AACTCTTTTCATGGGAATTTTGTTCCTTATTCTAAGGCAGAATGAACTAT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTTCATGGGAATTTTGTTCCTTATTCTAAGGCAGAATGAACTAT  349

seq1  CCAAGCATTGGTCTTCCTTCTTCTTGATTTTTCTTACAAATTGTATCTTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCATTGGTCTTCCTTCTTCTTGATTTTTCTTACAAATTGTATCTTG  399

seq1  GGTATTTTAGGTTTCTGGGCTAATATCCACTTATCAGTGAGTGCATATCA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTAGGTTTCTGGGCTAATATCCACTTATCAGTGAGTGCATATCA  449

seq1  AGTGAGTTCTTTTGTGAACTCACTTTTTAAATTGTCTCTTATTTATAAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTCTTTTGTGAACTCACTTTTTAAATTGTCTCTTATTTATAAAA  499

seq1  TATAAAAATCCAGCCCAGTGTTATATGTTGTAAGCTAAAAGGATATTGTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAATCCAGCCCAGTGTTATATGTTGTAAGCTAAAAGGATATTGTT  549

seq1  TAATGGTATGCAGATGGAATAACCTGGGAAAGAAGGTAAAGAAATGTTTA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTATGCAGATGGAATAACCTGGGAAAGAAGGTAAAGAAATGTTTA  599

seq1  ATGTCACTTTCCATTTGTTTAATTTTTTGTTTACCTTCTGAGGTTATCTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACTTTCCATTTGTTTAATTTTTTGTTTACCTTCTGAGGTTATCTT  649

seq1  TACATATATCTAAACTATTCTCTATACCCTAAAGAAATAGAAGAAATCAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATATCTAAACTATTCTCTATACCCTAAAGAAATAGAAGAAATCAT  699

seq1  TAAAATCCTCCCAACTAAAACCATCCCAAGGCCAGATGGTGGTAGTGCAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCTCCCAACTAAAACCATCCCAAGGCCAGATGGTGGTAGTGCAG  749

seq1  AATTCCACCAGATCTTCACAAAAGAGCTAATACCAACATTCCTCAAACTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCACCAGATCTTCACAAAAGAGCTAATACCAACATTCCTCAAACTG  799

seq1  TTCCACATAATAGAAACAGAAGAACACAACCTAACTCATTCTGTGAATCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACATAATAGAAACAGAAGAACACAACCTAACTCATTCTGTGAATCA  849

seq1  ACAGCTACTCTGAAATATAAACCACACACACACAAACCCAACCAAGAAAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACTCTGAAATATAAACCACACACACACAAACCCAACCAAGAAAG  899

seq1  AGAACTTCAGACTTATTTCACTTATGAATATCAATAAAAAATACTCAATA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCAGACTTATTTCACTTATGAATATCAATAAAAAATACTCAATA  949

seq1  AAATTTTCCCAAACAGAATTC  963
      |||||||||||||||||||||
seq2  AAATTTTCCCAAACAGAATTC  970