MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-253M14
Chromosome	6 (Build37)
Map Location	23,445,443 - 23,562,117
singlet/doublet	doublet
Overlap gene	Cadps2
Upstream gene	LOC100040959, LOC668018, LOC668022, Ptprz1, Aass, EG668044, EG546894, EG668053, EG384356, Fezf1
Downstream gene	Rnf133, Rnf148, Tas2r118, LOC100041082, Slc13a1, LOC100041094, Iqub, Ndufa5, Asb15, EG626715, Lmod2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040959 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC668018 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 117 ESTs, 22 Proteins pseudo : _no_value

name	LOC668022 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668022
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 6 Proteins pseudo : _no_value

name	Ptprz1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19283 MGI:97816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aass (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30956 MGI:1353573
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668044 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668044 MGI:3645708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG546894 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546894 MGI:3643846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	EG668053 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668053 MGI:3648955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG384356 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384356 MGI:3642953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	Fezf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73191 MGI:1920441
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 7 ESTs

name	Cadps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320405 MGI:2443963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf133 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:386611 MGI:2677436
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf148 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71300 MGI:1918550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 12 Proteins

name	Tas2r118 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:387347 MGI:2681247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041082 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Slc13a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55961 MGI:1859937
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041094 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Iqub (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214704 MGI:3041159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufa5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68202 MGI:1915452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78910 MGI:1926160
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626715 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626715 MGI:3644138
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Lmod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93677 MGI:2135672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptprz1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486806 GeneID:19283 MGI:97816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, receptor type Z, polypeptide 1 transcript_id : NM_001081306.1

name	Aass (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83779005 GeneID:30956 MGI:1353573
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aminoadipate-semialdehyde synthase transcript_id : NM_013930.3

name	EG546894 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254870 GeneID:546894 MGI:3643846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : predicted gene, EG546894 transcript_id : XM_621703.4

name	EG384356 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377082 GeneID:384356 MGI:3642953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : predicted gene, EG384356 transcript_id : XM_621704.3

name	Fezf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377086 GeneID:73191 MGI:1920441
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 7 ESTs product : Fez family zinc finger 1 transcript_id : XM_133029.5

name	Cadps2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118200357 GeneID:320405 MGI:2443963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ca2+-dependent activator protein for secretion 2 transcript_id : NM_153163.3

name	Rnf133 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802250 GeneID:386611 MGI:2677436
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 133 transcript_id : NM_198251.2

name	Rnf148 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377054 GeneID:71300 MGI:1918550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 12 Proteins product : ring finger protein 148 transcript_id : XM_889230.2

name	Tas2r118 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46309592 GeneID:387347 MGI:2681247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : taste receptor, type 2, member 118 transcript_id : NM_207022.1

name	Slc13a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9507108 GeneID:55961 MGI:1859937
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 13 (sodium/sulphate symporters), member 1 transcript_id : NM_019481.1

name	Iqub (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383826 GeneID:214704 MGI:3041159
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IQ motif and ubiquitin domain containing transcript_id : NM_172535.2

name	Ndufa5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802530 GeneID:68202 MGI:1915452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 transcript_id : NM_026614.2

name	Asb15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379715 GeneID:78910 MGI:1926160
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 15 transcript_id : NM_080847.2

name	Lmod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801988 GeneID:93677 MGI:2135672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leiomodin 2 (cardiac) transcript_id : NM_053098.2

name	Ptprz1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486807 GeneID:19283 MGI:97816
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IDA]; GO:0006730 - one-carbon compound metabolism [Evidence IEA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA]; GO:0007185 - transmembrane receptor protein tyrosine phosphatase signaling pathway [Evidence IEA] codon_start : 1 note : 3F8 chondroitin sulfate proteoglycan; 3H1 keratan sulfate proteoglycan; protein tyrosine phosphate, receptor type, Z; phosphacan product : protein tyrosine phosphatase, receptor type Z, polypeptide 1 protein_id : NP_001074775.1

name	Aass (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980703 CCDS:CCDS19937.1 GeneID:30956 MGI:1353573
definition	EC_number : 1.5.1.7 EC_number : 1.5.1.8 EC_number : 1.5.1.9 GO_component : GO:0005739 - mitochondrion [Evidence TAS] [Evidence IDA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0010010 - lysine-ketoglutarate reductase activity [Evidence IDA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0047131 - saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [Evidence IEA] [Evidence IDA]; GO:0047130 - saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : lysine oxoglutarate reductase; saccharopine dehydrogenase product : aminoadipate-semialdehyde synthase precursor protein_id : NP_038958.2

name	EG546894 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254871 GeneID:546894 MGI:3643846
definition	codon_start : 1 product : hypothetical protein protein_id : XP_621703.4

name	EG384356 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377083 GeneID:384356 MGI:3642953
definition	codon_start : 1 product : hypothetical protein protein_id : XP_621704.3

name	Fezf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20915070 GeneID:73191 MGI:1920441
definition	codon_start : 1 product : FEZ family zinc finger 1 protein_id : XP_133029.1

name	Cadps2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118200358 GeneID:320405 MGI:2443963
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA]; GO:0031410 - cytoplasmic vesicle [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IDA]; GO:0042734 - presynaptic membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0045921 - positive regulation of exocytosis [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : cerebellum postnatal development associated protein 2 product : Ca2+-dependent activator for secretion protein 2 protein_id : NP_694803.3

name	Rnf133 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38016196 CCDS:CCDS19938.1 GeneID:386611 MGI:2677436
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : ring finger protein 133 protein_id : NP_937894.1

name	Rnf148 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82802027 GeneID:71300 MGI:1918550
definition	codon_start : 1 product : ring finger protein 148 protein_id : XP_894323.1

name	Tas2r118 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46309593 CCDS:CCDS19939.1 GeneID:387347 MGI:2681247
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0001580 - detection of chemical stimulus during sensory perception of bitter taste [Evidence TAS]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0050909 - sensory perception of taste [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : taste receptor, type 2, member 118 protein_id : NP_996905.1

name	Slc13a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507109 CCDS:CCDS19940.1 GeneID:55961 MGI:1859937
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0031402 - sodium ion binding [Evidence IEA]; GO:0008271 - sulfate porter activity [Evidence IDA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0008272 - sulfate transport [Evidence IDA] codon_start : 1 exception : mismatches in translation product : solute carrier family 13 (sodium/sulphate symporters), member 1 protein_id : NP_062354.1

name	Iqub (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369746 CCDS:CCDS19941.1 GeneID:214704 MGI:3041159
definition	codon_start : 1 exception : mismatches in translation product : IQ motif and ubiquitin domain containing protein_id : NP_766123.1

name	Ndufa5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386100 CCDS:CCDS19942.1 GeneID:68202 MGI:1915452
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016651 - oxidoreductase activity, acting on NADH or NADPH [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 protein_id : NP_080890.1

name	Asb15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18252788 CCDS:CCDS19943.1 GeneID:78910 MGI:1926160
definition	GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ankyrin repeat and SOCS box-containing 15 protein_id : NP_543123.1

name	Lmod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74315957 CCDS:CCDS19944.1 GeneID:93677 MGI:2135672
definition	codon_start : 1 product : leiomodin 2 (cardiac) protein_id : NP_444328.1

name	LOC100040959 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040959
definition	number : 1 pseudo : _no_value

name	LOC100040959 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040959
definition	number : 2 pseudo : _no_value

name	LOC100040959 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040959
definition	number : 3 pseudo : _no_value

name	LOC100040959 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040959
definition	number : 4 pseudo : _no_value

name	EG668044 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668044
definition	number : 1 pseudo : _no_value

name	EG668053 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668053
definition	number : 2 pseudo : _no_value

name	EG668053 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668053
definition	number : 1 pseudo : _no_value

name	LOC100041082 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041082
definition	number : 1 pseudo : _no_value

name	LOC100041094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041094
definition	number : 1 pseudo : _no_value

name	LOC100041094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041094
definition	number : 2 pseudo : _no_value

name	EG626715 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626715
definition	number : 1 pseudo : _no_value

name	EG626715 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626715
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:123228
definition	standard_name : RH118300

name	(CDS detail)
type	STS
link
xref	UniSTS:130986
definition	standard_name : D6Mit85

name	(CDS detail)
type	STS
link
xref	UniSTS:90654
definition	standard_name : RH99023

name	(CDS detail)
type	STS
link
xref	UniSTS:164327
definition	standard_name : AU024121

name	(CDS detail)
type	STS
link
xref	UniSTS:122753
definition	standard_name : 03.MMHAP86FRA9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:185657
definition	standard_name : AI850339

name	(CDS detail)
type	STS
link
xref	UniSTS:498354
definition	standard_name : Ptprz1

name	(CDS detail)
type	STS
link
xref	UniSTS:498441
definition	standard_name : Ptprz1

name	(CDS detail)
type	STS
link
xref	UniSTS:498442
definition	standard_name : Ptprz1

name	(CDS detail)
type	STS
link
xref	UniSTS:163382
definition	standard_name : AJ224761

name	(CDS detail)
type	STS
link
xref	UniSTS:116590
definition	standard_name : D6Mit204

name	(CDS detail)
type	STS
link
xref	UniSTS:141467
definition	standard_name : D0Nds38

name	(CDS detail)
type	STS
link
xref	UniSTS:141467
definition	standard_name : D0Nds38

name	(CDS detail)
type	STS
link
xref	UniSTS:235392
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:220719
definition	standard_name : RH138632

name	(CDS detail)
type	STS
link
xref	UniSTS:207929
definition	standard_name : AW550108

name	(CDS detail)
type	STS
link
xref	UniSTS:224843
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:12511
definition	standard_name : GDB:1317954

name	(CDS detail)
type	STS
link
xref	UniSTS:488666
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:125437
definition	standard_name : MHAa88f8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:125257
definition	standard_name : MHAa67a12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:490633
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:493143
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179346
definition	standard_name : AI987826

name	(CDS detail)
type	STS
link
xref	UniSTS:159488
definition	standard_name : AI314066

name	(CDS detail)
type	STS
link
xref	UniSTS:166230
definition	standard_name : Slc13a1

name	(CDS detail)
type	STS
link
xref	UniSTS:272335
definition	standard_name : PMC263877P1

name	(CDS detail)
type	STS
link
xref	UniSTS:116591
definition	standard_name : D6Mit170

name	LOC668018 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254868 GeneID:668018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 117 ESTs, 22 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_032307.1

name	LOC668022 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254869 GeneID:668022
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 6 Proteins product : similar to polycomb group ring finger 1 pseudo : _no_value transcript_id : XR_032322.1

clone name	MSMg01-384I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165B10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-347L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379H16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-098K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-253M14.b	B6Ng01-253M14.g
ACC	GA060422	GA060423
length	1,052	1,122
definition	B6Ng01-253M14.b	B6Ng01-253M14.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(23,445,443 - 23,446,495)	(23,560,988 - 23,562,117)
sequence	gaattctagtccctttctaagagacacaggtagataaatatagagttaag ctgagaaaatataaaggtttgaaagttcattttatttaagagtcgagagc tggctgtggtggcacataactttaatcccagcactcgggaggcaaaggct aaggaatctctgtgagttcgaggccagcctggtctacagagtgagttcta gaatagccatagctacacagtgagactgtcttgaaaacaaaacaacacaa caacagcaaaaagagttcagacttgggttctgagctggtttcttaccagc actgaagagaaagaaccttagcaaccagaactgctgtgataggccaaggc agcgcctgggtgagaagctattcacgtattcaccgcttggtttccaagta ctctttcactccagtaccgacttagtttccacccacttttatactagata aatctcacatgcctcccatcaaaatgtgcccatccttgtgggttatatct gatgtaacctttagcttttatatattctatggaaggttaaccatttctag agacctgagctccagctatgatcacagatgtatagaaaaaaacatctaag gaatattcttcacaatcgggatatggcacgacggcatggcggtttagagt ttcctccatcttgtattcttgctgaggccgttttgggtttaactagaatt tgattcccttgatggataatcctgtgggaatgacacagttctgttctagg actaaggccaacatgcttcggttaactctccttcgcttcggttacaccgc ctgctgtggaaacctcccctgcagctgctgaatgacataacaagatgtgg tatccgccccactcccactcccatctttaaaagcacgtgtggggtgacac ttaggtcctgagaagctgagtatagtcccagacagctgtattaaagactt ccaaatgtctataaactgtgtctgagtgggttccttttggtgcatttccc cataataagtgatatcatcaaatcaatccccataatacatgatatcatcc aa	gaattcattgttccagtgcactggggttgtcccagacctgaaggagaggc agtgacccctggcgccaattcagcgtgtttttatatagtttacaggggca aaatagagcatcagcaactgggcacaatatgattggcagaacagtgcacc ctttaaactggtctttagggaatgaggtgacaaggacttcccttgtctga aggtgggcaaggatctgacctgctgcatgtgtccccacctgcaggttggc tagaccctctggtcggagaaatgttaatttgcctctcccttccggagggg taagtgtttcatgaacttcccaaagttcctgagctgaccttttcaatcct actttctctacaaaggtcttctctatcccttcctttttgctaaatgttgg gagaggagaaaaaatatgaagaagtacagttttttaccataactccgaaa gccatcattatcaactatttcatctttgtttctatacatacaaagtacct gctttactaagcataggataaatattctttgtagcattaagatatagaaa tatatgatgtgtttcctattgtgtgaaaaacaaagaacagaacagatatg taacacagaaccaaggagcgtgaaacagttatgctgagacatggagccaa acagtgatattagtaccttgacccaaccctttatctattgtgtgactcta ggaaagtggcttaaacaaatctatggagacaactggccaccttcctggtg agagcacaggggtccgcccagcccgagaggtttctgcctcagccccagcg gcgggagcctccttggctcctggactctgctgagggcaggctgcacggtg acggtgtggaatacagaggccagcccgtttctgggacaggcaagagccac agagcttctgaggcgacgccatcttcggctccagacaacccggccacctt tcctgggccaaagcacacagctctggaaagatcctgttttggggcttcat cttcagcagagagtccaacaccagattactgtgcacttcctgaaagagga gagcttggctgcaaagactgctctgaccactgaaactcaagagaagagct aggtctccacgtctgctgatag
quality values	Open. Hide. 58 34 26 28 62 62 62 47 62 62 62 62 62 62 46 43 62 42 51 54 62 62 62 44 39 56 62 47 62 62 62 51 56 59 44 32 34 40 59 51 56 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 62 62 62 62 62 62 59 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 49 46 54 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 58 58 47 58 58 58 58 58 58 54 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 58 58 58 52 58 49 39 54 54 54 54 45 54 58 58 58 54 53 53 58 58 53 45 45 47 58 58 54 41 58 58 58 58 46 51 58 58 51 51 58 45 46 58 50 58 50 58 58 51 58 58 54 53 58 54 58 58 58 58 49 58 44 49 50 58 53 58 53 51 28 58 58 41 47 41 39 58 54 53 51 52 50 50 51 58 58 53 53 58 58 36 41 42 49 58 58 50 53 52 51 51 50 41 58 50 40 51 58 58 50 54 51 52 58 42 53 40 58 52 58 58 50 50 58 52 49 44 40 54 53 49 44 54 40 53 41 54 49 41 54 51 40 51 50 39 14 46 40 54 41 25 54 54 50 54 54 41 42 54 42 46 49 37 49 49 52 49 50 27 54 54 53 45 52 51 37 54 54 46 51 49 33 35 54 51 41 34 53 46 45 40 49 40 54 40 46 49 35 36 39 29 53 42 32 40 42 37 34 52 41 47 45 40 30 30 42 40 34 31 40 31 31 39 31 33 15 46 26 33 26 32 34 32 41 47 42 31 34 40 26 40 31 41 31 33 31 42 31 51 42 42 31 41 37 31 45 40 30 35 18 33 25 31 30 36 36 32 45 31 41 33 26 42 31 36 43 31 51 29 45 51 16 14 38 41 31 42 40 38 41 43 31 31 28 36 43 31 42 32 33 25 30 31 43 38 28 25 31 30 28 31 30 41 42 37 28 31 31 35 33 26 30 31 32 35 31 41 44 46 29 26 32 31 29 41 39 24 32 32 27 39 23 23 31 31 31 46 33 33 46 44 37 27 30 22 30 34 42 42 36 38 43 43 36 20 37 28 16 20 20 20 31 21 10 32 23 27 23 18 31 42 23 29 41 22 26 32 32 38 16 32 27 31 26 30 37 30 38 26 19 21 22 14 21 32 34 32 21 15 20 19 33 18 31 25 16 18 18 18 25 9 18 12 37 24 27 29 24 34 32 27 23 22 26 21 18 23 34 22 32 27 25 30 27 28 10 17 8 30 8 17 9 11 16 14 32 32 22 28 29 20 28 28 16 16 30 9 27 27 28 11 14 28 14 13 6 7 3 3 5 18 25 15 19 28 28 18 23 21 3 29 27 23 25 11 15 15 23 24 21 18 10 15 5 12 6 6 3 6 18 16 9 12 10 21 23 18 22 8 15 8 13	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr6_23445443_23446495
seq2: B6Ng01-253M14.b_45_1096

seq1  GAATTCTAGTCCCTTTCTAAGAGACACAGGTAGATAAATATAGAGTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTCCCTTTCTAAGAGACACAGGTAGATAAATATAGAGTTAAG  50

seq1  CTGAGAAAATATAAAGGTTTGAAAGTTCATTTTATTTAAGAGTCGAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAAATATAAAGGTTTGAAAGTTCATTTTATTTAAGAGTCGAGAGC  100

seq1  TGGCTGTGGTGGCACATAACTTTAATCCCAGCACTCGGGAGGCAAAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGGTGGCACATAACTTTAATCCCAGCACTCGGGAGGCAAAGGCT  150

seq1  AAGGAATCTCTGTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCTCTGTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTA  200

seq1  GAATAGCCATAGCTACACAGTGAGACTGTCTTGAAAACAAAACAACACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCCATAGCTACACAGTGAGACTGTCTTGAAAACAAAACAACACAA  250

seq1  CAACAGCAAAAAGAGTTCAGACTTGGGTTCTGAGCTGGTTTCTTACCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCAAAAAGAGTTCAGACTTGGGTTCTGAGCTGGTTTCTTACCAGC  300

seq1  ACTGAAGAGAAAGAACCTTAGCAACCAGAACTGCTGTGATAGGCCAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGAGAAAGAACCTTAGCAACCAGAACTGCTGTGATAGGCCAAGGC  350

seq1  AGCGCCTGGGTGAGAAGCTATTCACGTATTCACCGCTTGGTTTCCAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCTGGGTGAGAAGCTATTCACGTATTCACCGCTTGGTTTCCAAGTA  400

seq1  CTCTTTCACTCCAGTACCGACTTAGTTTCCACCCACTTTTATACTAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCACTCCAGTACCGACTTAGTTTCCACCCACTTTTATACTAGATA  450

seq1  AATCTCACATGCCTCCCATCAAAATGTGCCCATCCTTGTGGGTTATATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCACATGCCTCCCATCAAAATGTGCCCATCCTTGTGGGTTATATCT  500

seq1  GATGTAACCTTTAGCTTTTATATATTCTATGGAAGGTTAACCATTTCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAACCTTTAGCTTTTATATATTCTATGGAAGGTTAACCATTTCTAG  550

seq1  AGACCTGAGCTCCAGCTATGATCACAGATGTATAGAAAAAAACATCTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGAGCTCCAGCTATGATCACAGATGTATAGAAAAAAACATCTAAG  600

seq1  GAATATTCTTCACAATCGGGATATGGCACGACGGCATGGCGGTTTAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTCTTCACAATCGGGATATGGCACGACGGCATGGCGGTTTAGAGT  650

seq1  TTCCTCCATCTTGTATTCTTGCTGAGGCCGTTTTGGGTTTAACTAGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCATCTTGTATTCTTGCTGAGGCCGTTTTGGGTTTAACTAGAATT  700

seq1  TGATTCCCTTGATGGATAATCCTGTGGGAATGACACAGTTCTGTTCTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCCTTGATGGATAATCCTGTGGGAATGACACAGTTCTGTTCTAGG  750

seq1  ACTAAGGCCAACATGCTTCGGTTAACTCTCCTTCGCTTCGGTTACACCGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGCCAACATGCTTCGGTTAACTCTCCTTCGCTTCGGTTACACCGC  800

seq1  CTGCTGTGGAAACCTCCCCTGCAGCTGCTGAATGACATAACAAGATGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGGAAACCTCCCCTGCAGCTGCTGAATGACATAACAAGATGTGG  850

seq1  TATCCGCCCCACTCCCACTCCCATCTTTAAAAGCACGTGTGGGGTGACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCGCCCCACTCCCACTCCCATCTTTAAAAGCACGTGTGGGGTGACAC  900

seq1  TTAGGTCCTGAGAAGCTGAGTATAGTCCCAGACAGCTGTATTAAAGACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCCTGAGAAGCTGAGTATAGTCCCAGACAGCTGTATTAAAGACTT  950

seq1  CCAAATGTCTATAAACTGTGTCTGAGT-GGTTCCTTTTGGTGCA-TTCCC  998
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  CCAAATGTCTATAAACTGTGTCTGAGTGGGTTCCTTTTGGTGCATTTCCC  1000

seq1  CATAATAAGGTGATATCATCCAAATCAATCCCCATAATAACATGATATCA  1048
      |||||||| |||||||||| |||||||||||||||||| |||||||||||
seq2  CATAATAA-GTGATATCAT-CAAATCAATCCCCATAAT-ACATGATATCA  1047

seq1  TCCAA  1053
      |||||
seq2  TCCAA  1052

seq1: chr6_23560988_23562117
seq2: B6Ng01-253M14.g_67_1188 (reverse)

seq1  CTATCAGCAGACGTGGGAGA-CTAGCTCTCTCCTCTGAGTTTCAGTGGTC  49
      |||||||||||||| ||||| |||||||| ||   |||||||||||||||
seq2  CTATCAGCAGACGT-GGAGACCTAGCTCT-TCTCTTGAGTTTCAGTGGTC  48

seq1  AGAGCAGTCTCTGCAGGCAAGCTCTCCTCTTTCAGGGAAGGTGCACAGTT  99
      |||||||||| ||||| |||||||||||||||||||  | ||||||||| 
seq2  AGAGCAGTCTTTGCAGCCAAGCTCTCCTCTTTCAGG--AAGTGCACAGTA  96

seq1  ATCTGGTGTTTGGACCTCCTCCTGGCTGAAGATGAAGGCCCAAAACAGGA  149
      |||||||| |||||    |||   ||||||||||||| ||||||||||||
seq2  ATCTGGTG-TTGGA----CTCTCTGCTGAAGATGAAGCCCCAAAACAGGA  141

seq1  TCTTTCCCAGGAGCTGTGTTGCTTTGG-CCAGG-AAGGTGGCC-GGTTGT  196
      |||||||   |||||||| |||||||| ||||| ||||||||| ||||||
seq2  TCTTTCC--AGAGCTGTG-TGCTTTGGCCCAGGAAAGGTGGCCGGGTTGT  188

seq1  CTGGAGCCGAAGATGGCGTCGCCTCAGAAGCTCTGTGGCTCTTGCCTGTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCCGAAGATGGCGTCGCCTCAGAAGCTCTGTGGCTCTTGCCTGTC  238

seq1  CCAGAAAC-GGCTGGCCTCTGTATTCCACACCGTCACCGTGCAGCCTGCC  295
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACGGGCTGGCCTCTGTATTCCACACCGTCACCGTGCAGCCTGCC  288

seq1  CTCAGCAGAGTCCAGGAGCCAAGGAGGCTCCCGCCGCTGGGGCCTGAGGC  345
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCAGCAGAGTCCAGGAGCCAAGGAGGCTCCCGCCGCTGGGG-CTGAGGC  337

seq1  AGAAACCTCTCGGGCTGGGCGGACCCCTGTGCTCTCACCAGGAAGGTGGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTCTCGGGCTGGGCGGACCCCTGTGCTCTCACCAGGAAGGTGGC  387

seq1  CAGTTGTCTCCATAGATTTGTTTAAGCCACTTTCCTAGAGTCACACAATA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTCTCCATAGATTTGTTTAAGCCACTTTCCTAGAGTCACACAATA  437

seq1  GATAAAGGGTTGGGTCAAGGTACTAATATCACTGTTTGGCTCCATGTCTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGGGTTGGGTCAAGGTACTAATATCACTGTTTGGCTCCATGTCTC  487

seq1  AGCATAACTGTTTCACGCTCCTTGGTTCTGTGTTACATATCTGTTCTGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAACTGTTTCACGCTCCTTGGTTCTGTGTTACATATCTGTTCTGTT  537

seq1  CTTTGTTTTTCACACAATAGGAAACACATCATATATTTCTATATCTTAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTTCACACAATAGGAAACACATCATATATTTCTATATCTTAAT  587

seq1  GCTACAAAGAATATTTATCCTATGCTTAGTAAAGCAGGTACTTTGTATGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAAGAATATTTATCCTATGCTTAGTAAAGCAGGTACTTTGTATGT  637

seq1  ATAGAAACAAAGATGAAATAGTTGATAATGATGGCTTTCGGAGTTATGGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACAAAGATGAAATAGTTGATAATGATGGCTTTCGGAGTTATGGT  687

seq1  AAAAAACTGTACTTCTTCATATTTTTTCTCCTCTCCCAACATTTAGCAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTGTACTTCTTCATATTTTTTCTCCTCTCCCAACATTTAGCAAA  737

seq1  AAGGAAGGGATAGAGAAGACCTTTGTAGAGAAAGTAGGATTGAAAAGGTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGGATAGAGAAGACCTTTGTAGAGAAAGTAGGATTGAAAAGGTC  787

seq1  AGCTCAGGAACTTTGGGAAGTTCATGAAACACTTACCCCTCCGGAAGGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGGAACTTTGGGAAGTTCATGAAACACTTACCCCTCCGGAAGGGA  837

seq1  GAGGCAAATTAACATTTCTCCGACCAGAGGGTCTAGCCAACCTGCAGGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAATTAACATTTCTCCGACCAGAGGGTCTAGCCAACCTGCAGGTG  887

seq1  GGGACACATGCAGCAGGTCAGATCCTTGCCCACCTTCAGACAAGGGAAGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACATGCAGCAGGTCAGATCCTTGCCCACCTTCAGACAAGGGAAGT  937

seq1  CCTTGTCACCTCATTCCCTAAAGACCAGTTTAAAGGGTGCACTGTTCTGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCACCTCATTCCCTAAAGACCAGTTTAAAGGGTGCACTGTTCTGC  987

seq1  CAATCATATTGTGCCCAGTTGCTGATGCTCTATTTTGCCCCTGTAAACTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATATTGTGCCCAGTTGCTGATGCTCTATTTTGCCCCTGTAAACTA  1037

seq1  TATAAAAACACGCTGAATTGGCGCCAGGGGTCACTGCCTCTCCTTCAGGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACACGCTGAATTGGCGCCAGGGGTCACTGCCTCTCCTTCAGGT  1087

seq1  CTGGGACAACCCCAGTGCACTGGAACAATGAATTC  1130
      |||||||||||||||||||||||||||||||||||
seq2  CTGGGACAACCCCAGTGCACTGGAACAATGAATTC  1122

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information